RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 PCDHA10Q9Y5I2 948 aa14.87□□□□□ -0.03
RTN3-207ENST00000536011 BRWD1Q9NSI6 2320 aa14.86□□□□□ -0.03
RTN3-207ENST00000536011 TCF20Q9UGU0 1960 aaKnown RBP14.86□□□□□ -0.03
RTN3-207ENST00000536011 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.86□□□□□ -0.03
RTN3-207ENST00000536011 WDR64B1ANS9 1081 aa14.86□□□□□ -0.03
RTN3-207ENST00000536011 DGKIO75912 1065 aa14.86□□□□□ -0.03
RTN3-207ENST00000536011 KCNA5P22460 613 aa14.86□□□□□ -0.03
RTN3-207ENST00000536011 BMPR1AP36894 532 aa14.86□□□□□ -0.03
RTN3-207ENST00000536011 USP11P51784 963 aa14.86□□□□□ -0.03
RTN3-207ENST00000536011 NLRP5P59047 1200 aa14.86□□□□□ -0.03
RTN3-207ENST00000536011 CCT2P78371 535 aaKnown RBP14.86□□□□□ -0.03
RTN3-207ENST00000536011 NTRK3Q16288 839 aa14.86□□□□□ -0.03
RTN3-207ENST00000536011 LEXMQ3ZCV2 418 aa14.86□□□□□ -0.03
RTN3-207ENST00000536011 CMTR2Q8IYT2 770 aaKnown RBP14.86□□□□□ -0.03
RTN3-207ENST00000536011 ZNF710Q8N1W2 664 aa14.86□□□□□ -0.03
RTN3-207ENST00000536011 ZBTB10Q96DT7 871 aa14.86□□□□□ -0.03
RTN3-207ENST00000536011 NECAB3Q96P71 396 aaPredicted RBP14.86□□□□□ -0.03
RTN3-207ENST00000536011 TM6SF1Q9BZW5 370 aa14.86□□□□□ -0.03
RTN3-207ENST00000536011 RC3H2Q9HBD1 1191 aaKnown RBP14.86□□□□□ -0.03
RTN3-207ENST00000536011 ZSWIM6Q9HCJ5 1215 aa14.86□□□□□ -0.03
RTN3-207ENST00000536011 VPS54Q9P1Q0 977 aa14.86□□□□□ -0.03
RTN3-207ENST00000536011 LRFN2Q9ULH4 789 aa14.86□□□□□ -0.03
RTN3-207ENST00000536011 FAM50BQ9Y247 325 aa14.86□□□□□ -0.03
RTN3-207ENST00000536011 SAMM50Q9Y512 469 aa14.86□□□□□ -0.03
RTN3-207ENST00000536011 MAFBQ9Y5Q3 323 aaPredicted RBP14.86□□□□□ -0.03
RTN3-207ENST00000536011 TTC3P53804 2025 aa14.86□□□□□ -0.03
RTN3-207ENST00000536011 RPS6KA5O75582 802 aa14.85□□□□□ -0.03
RTN3-207ENST00000536011 SSRP1Q08945 709 aaKnown RBP14.85□□□□□ -0.03
RTN3-207ENST00000536011 NAALADL2Q58DX5 795 aa14.85□□□□□ -0.03
RTN3-207ENST00000536011 PPP2R3CQ969Q6 453 aa14.85□□□□□ -0.03
RTN3-207ENST00000536011 ZNF689Q96CS4 500 aaPredicted RBP14.85□□□□□ -0.03
RTN3-207ENST00000536011 ZNF274Q96GC6 653 aaPredicted RBP14.85□□□□□ -0.03
RTN3-207ENST00000536011 RIT2Q99578 217 aa14.85□□□□□ -0.03
RTN3-207ENST00000536011 NCOA5Q9HCD5 579 aaKnown RBP14.85□□□□□ -0.03
RTN3-207ENST00000536011 GINS2Q9Y248 185 aa14.85□□□□□ -0.03
RTN3-207ENST00000536011 DENND3A2RUS2 1198 aa14.84□□□□□ -0.03
RTN3-207ENST00000536011 GPR182O15218 404 aa14.84□□□□□ -0.03
RTN3-207ENST00000536011 MAGEB2O15479 319 aa14.84□□□□□ -0.03
RTN3-207ENST00000536011 CDKL5O76039 1030 aa14.84□□□□□ -0.03
RTN3-207ENST00000536011 DEXIO95424 95 aa14.84□□□□□ -0.03
RTN3-207ENST00000536011 TMOD1P28289 359 aa14.84□□□□□ -0.03
RTN3-207ENST00000536011 SFNP31947 248 aa14.84□□□□□ -0.03
RTN3-207ENST00000536011 NFX1Q12986 1120 aaKnown RBP14.84□□□□□ -0.03
RTN3-207ENST00000536011 TCEAL5Q5H9L2 206 aa14.84□□□□□ -0.03
RTN3-207ENST00000536011 GALNT17Q6IS24 598 aa14.84□□□□□ -0.03
RTN3-207ENST00000536011 KIAA0319LQ8IZA0 1049 aa14.84□□□□□ -0.03
RTN3-207ENST00000536011 RASGRP4Q8TDF6 673 aa14.84□□□□□ -0.03
RTN3-207ENST00000536011 LINC01599Q8WXQ3 324 aa14.84□□□□□ -0.03
RTN3-207ENST00000536011 P2RX5Q93086 422 aa14.84□□□□□ -0.03
RTN3-207ENST00000536011 PABPC5Q96DU9 382 aaKnown RBP14.84□□□□□ -0.03
RTN3-207ENST00000536011 MAP7D2Q96T17 732 aa14.84□□□□□ -0.03
RTN3-207ENST00000536011 C1orf112Q9NSG2 853 aa14.84□□□□□ -0.03
RTN3-207ENST00000536011 GABBR1Q9UBS5 961 aa14.84□□□□□ -0.03
RTN3-207ENST00000536011 ZBTB42B2RXF5 422 aa14.83□□□□□ -0.04
RTN3-207ENST00000536011 GAS7O60861 476 aa14.83□□□□□ -0.04
RTN3-207ENST00000536011 C22orf31O95567 290 aa14.83□□□□□ -0.04
RTN3-207ENST00000536011 SARSP49591 514 aaKnown RBP14.83□□□□□ -0.04
RTN3-207ENST00000536011 JAK3P52333 1124 aa14.83□□□□□ -0.04
RTN3-207ENST00000536011 CRYBB1P53674 252 aaPredicted RBP14.83□□□□□ -0.04
RTN3-207ENST00000536011 TOB2Q14106 344 aaPredicted RBP14.83□□□□□ -0.04
RTN3-207ENST00000536011 METTL13Q8N6R0 699 aa14.83□□□□□ -0.04
RTN3-207ENST00000536011 RDM1Q8NG50 284 aa14.83□□□□□ -0.04
RTN3-207ENST00000536011 LENG9Q96B70 501 aa14.83□□□□□ -0.04
RTN3-207ENST00000536011 TEKT3Q9BXF9 490 aa14.83□□□□□ -0.04
RTN3-207ENST00000536011 DISC1Q9NRI5 854 aa14.83□□□□□ -0.04
RTN3-207ENST00000536011 NRBP2Q9NSY0 501 aa14.83□□□□□ -0.04
RTN3-207ENST00000536011 PCDHA4Q9UN74 947 aa14.83□□□□□ -0.04
RTN3-207ENST00000536011 PCDHB7Q9Y5E2 793 aa14.83□□□□□ -0.04
RTN3-207ENST00000536011 MYH9P35579 1960 aaKnown RBP14.83□□□□□ -0.04
RTN3-207ENST00000536011 SPDYE4A6NLX3 237 aa14.82□□□□□ -0.04
RTN3-207ENST00000536011 RBAK-RBAKDNI3L0D1 243 aa14.82□□□□□ -0.04
RTN3-207ENST00000536011 PPFIA3O75145 1194 aa14.82□□□□□ -0.04
RTN3-207ENST00000536011 MMP1P03956 469 aa14.82□□□□□ -0.04
RTN3-207ENST00000536011 ATP4AP20648 1035 aa14.82□□□□□ -0.04
RTN3-207ENST00000536011 COL19A1Q14993 1142 aa14.82□□□□□ -0.04
RTN3-207ENST00000536011 TMEM266Q2M3C6 531 aa14.82□□□□□ -0.04
RTN3-207ENST00000536011 LRCH2Q5VUJ6 765 aa14.82□□□□□ -0.04
RTN3-207ENST00000536011 PTCRAQ6ISU1 281 aaPredicted RBP14.82□□□□□ -0.04
RTN3-207ENST00000536011 EP400NLQ6ZTU2 488 aa14.82□□□□□ -0.04
RTN3-207ENST00000536011 NEK9Q8TD19 979 aa14.82□□□□□ -0.04
RTN3-207ENST00000536011 TBCKQ8TEA7 893 aa14.82□□□□□ -0.04
RTN3-207ENST00000536011 UIMC1Q96RL1 719 aa14.82□□□□□ -0.04
RTN3-207ENST00000536011 ERVK-5Q9HDB9 667 aa14.82□□□□□ -0.04
RTN3-207ENST00000536011 AAASQ9NRG9 546 aa14.82□□□□□ -0.04
RTN3-207ENST00000536011 MRPL42Q9Y6G3 142 aaKnown RBP14.82□□□□□ -0.04
RTN3-207ENST00000536011 GRM6O15303 877 aa14.81□□□□□ -0.04
RTN3-207ENST00000536011 MSH4O15457 936 aa14.81□□□□□ -0.04
RTN3-207ENST00000536011 OATP04181 439 aa14.81□□□□□ -0.04
RTN3-207ENST00000536011 LINC00271P0C7V0 271 aa14.81□□□□□ -0.04
RTN3-207ENST00000536011 XBP1P17861 261 aa14.81□□□□□ -0.04
RTN3-207ENST00000536011 PRKCEQ02156 737 aa14.81□□□□□ -0.04
RTN3-207ENST00000536011 KIZQ2M2Z5 673 aa14.81□□□□□ -0.04
RTN3-207ENST00000536011 Q4G0T1 1027 aa14.81□□□□□ -0.04
RTN3-207ENST00000536011 PAN2Q504Q3 1202 aaKnown RBP14.81□□□□□ -0.04
RTN3-207ENST00000536011 SLC24A5Q71RS6 500 aa14.81□□□□□ -0.04
RTN3-207ENST00000536011 RTN4RL1Q86UN2 441 aaPredicted RBP14.81□□□□□ -0.04
RTN3-207ENST00000536011 BLIDQ8IZY5 108 aa14.81□□□□□ -0.04
RTN3-207ENST00000536011 CRIPAKQ8N1N5 446 aa14.81□□□□□ -0.04
RTN3-207ENST00000536011 DAGLBQ8NCG7 672 aa14.81□□□□□ -0.04
RTN3-207ENST00000536011 SLC5A5Q92911 643 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms