RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 FBXL18Q96ME1 805 aa9.91□□□□□ -0.82
COPB1-210ENST00000533533 RNF26Q9BY78 433 aaPredicted RBP9.91□□□□□ -0.82
COPB1-210ENST00000533533 SMARCAD1Q9H4L7 1026 aa9.91□□□□□ -0.82
COPB1-210ENST00000533533 IGFLR1Q9H665 355 aa9.91□□□□□ -0.82
COPB1-210ENST00000533533 AGO3Q9H9G7 860 aaKnown RBP9.91□□□□□ -0.82
COPB1-210ENST00000533533 ALG13Q9NP73 1137 aaKnown RBP9.91□□□□□ -0.82
COPB1-210ENST00000533533 BARHL2Q9NY43 387 aa9.91□□□□□ -0.82
COPB1-210ENST00000533533 PLAGL2Q9UPG8 496 aa9.91□□□□□ -0.82
COPB1-210ENST00000533533 CDY2AQ9Y6F7 541 aa9.91□□□□□ -0.82
COPB1-210ENST00000533533 MYH9P35579 1960 aaKnown RBP9.91□□□□□ -0.82
COPB1-210ENST00000533533 NID2Q14112 1375 aa9.9□□□□□ -0.82
COPB1-210ENST00000533533 FNDC1Q4ZHG4 1894 aaPredicted RBP9.9□□□□□ -0.82
COPB1-210ENST00000533533 RRN3P2A6NIE6 340 aa9.9□□□□□ -0.82
COPB1-210ENST00000533533 hCG_1984214I3L0E3 225 aa9.9□□□□□ -0.82
COPB1-210ENST00000533533 STXBP3O00186 592 aa9.9□□□□□ -0.82
COPB1-210ENST00000533533 MAFGO15525 162 aa9.9□□□□□ -0.82
COPB1-210ENST00000533533 TBX10O75333 385 aa9.9□□□□□ -0.82
COPB1-210ENST00000533533 CDKL5O76039 1030 aa9.9□□□□□ -0.82
COPB1-210ENST00000533533 CSPG5O95196 566 aa9.9□□□□□ -0.82
COPB1-210ENST00000533533 RPLP2P05387 115 aaKnown RBP9.9□□□□□ -0.82
COPB1-210ENST00000533533 INSRRP14616 1297 aa9.9□□□□□ -0.82
COPB1-210ENST00000533533 CD52P31358 61 aa9.9□□□□□ -0.82
COPB1-210ENST00000533533 MRE11P49959 708 aa9.9□□□□□ -0.82
COPB1-210ENST00000533533 IGBP1P78318 339 aa9.9□□□□□ -0.82
COPB1-210ENST00000533533 ADAM15Q13444 863 aa9.9□□□□□ -0.82
COPB1-210ENST00000533533 MTMR1Q13613 665 aa9.9□□□□□ -0.82
COPB1-210ENST00000533533 NTRK3Q16288 839 aa9.9□□□□□ -0.82
COPB1-210ENST00000533533 NAALADL2Q58DX5 795 aa9.9□□□□□ -0.82
COPB1-210ENST00000533533 HERC4Q5GLZ8 1057 aaPredicted RBP9.9□□□□□ -0.82
COPB1-210ENST00000533533 IER5Q5VY09 327 aa9.9□□□□□ -0.82
COPB1-210ENST00000533533 PPP1R18Q6NYC8 613 aa9.9□□□□□ -0.82
COPB1-210ENST00000533533 RTN4RL1Q86UN2 441 aaPredicted RBP9.9□□□□□ -0.82
COPB1-210ENST00000533533 CMTR2Q8IYT2 770 aaKnown RBP9.9□□□□□ -0.82
COPB1-210ENST00000533533 ZNF713Q8N859 430 aaPredicted RBP9.9□□□□□ -0.82
COPB1-210ENST00000533533 CCDC12Q8WUD4 166 aaPredicted RBP9.9□□□□□ -0.82
COPB1-210ENST00000533533 LINC01599Q8WXQ3 324 aa9.9□□□□□ -0.82
COPB1-210ENST00000533533 P2RX5Q93086 422 aa9.9□□□□□ -0.82
COPB1-210ENST00000533533 MFSD14AQ96MC6 490 aa9.9□□□□□ -0.82
COPB1-210ENST00000533533 FTHL17Q9BXU8 183 aa9.9□□□□□ -0.82
COPB1-210ENST00000533533 PKD2L1Q9P0L9 805 aa9.9□□□□□ -0.82
COPB1-210ENST00000533533 VPS54Q9P1Q0 977 aa9.9□□□□□ -0.82
COPB1-210ENST00000533533 MUTYHQ9UIF7 546 aa9.9□□□□□ -0.82
COPB1-210ENST00000533533 CD207Q9UJ71 328 aa9.9□□□□□ -0.82
COPB1-210ENST00000533533 UBIAD1Q9Y5Z9 338 aa9.9□□□□□ -0.82
COPB1-210ENST00000533533 MRPL42Q9Y6G3 142 aaKnown RBP9.9□□□□□ -0.82
COPB1-210ENST00000533533 SQORQ9Y6N5 450 aa9.9□□□□□ -0.82
COPB1-210ENST00000533533 PLXNA4Q9HCM2 1894 aa9.89□□□□□ -0.83
COPB1-210ENST00000533533 CFAP54Q96N23 3096 aa9.89□□□□□ -0.83
COPB1-210ENST00000533533 USP34Q70CQ2 3546 aa9.89□□□□□ -0.83
COPB1-210ENST00000533533 LINC01565O15544 149 aa9.89□□□□□ -0.83
COPB1-210ENST00000533533 PFKFB2O60825 505 aa9.89□□□□□ -0.83
COPB1-210ENST00000533533 DEXIO95424 95 aa9.89□□□□□ -0.83
COPB1-210ENST00000533533 LARGE1O95461 756 aa9.89□□□□□ -0.83
COPB1-210ENST00000533533 ITGB1P05556 798 aa9.89□□□□□ -0.83
COPB1-210ENST00000533533 DNAJB1P25685 340 aa9.89□□□□□ -0.83
COPB1-210ENST00000533533 RBM25P49756 843 aaKnown RBP9.89□□□□□ -0.83
COPB1-210ENST00000533533 NLRP5P59047 1200 aa9.89□□□□□ -0.83
COPB1-210ENST00000533533 RABEP1Q15276 862 aa9.89□□□□□ -0.83
COPB1-210ENST00000533533 ME3Q16798 604 aa9.89□□□□□ -0.83
COPB1-210ENST00000533533 JAKMIP3Q5VZ66 844 aa9.89□□□□□ -0.83
COPB1-210ENST00000533533 TYW1BQ6NUM6 668 aa9.89□□□□□ -0.83
COPB1-210ENST00000533533 RNF135Q8IUD6 432 aa9.89□□□□□ -0.83
COPB1-210ENST00000533533 NPAS4Q8IUM7 802 aa9.89□□□□□ -0.83
COPB1-210ENST00000533533 SPPL3Q8TCT6 385 aa9.89□□□□□ -0.83
COPB1-210ENST00000533533 PPP2R3CQ969Q6 453 aa9.89□□□□□ -0.83
COPB1-210ENST00000533533 ZBTB10Q96DT7 871 aa9.89□□□□□ -0.83
COPB1-210ENST00000533533 PGBD1Q96JS3 809 aa9.89□□□□□ -0.83
COPB1-210ENST00000533533 MSLNLQ96KJ4 702 aa9.89□□□□□ -0.83
COPB1-210ENST00000533533 PCYT2Q99447 389 aa9.89□□□□□ -0.83
COPB1-210ENST00000533533 FAM49AQ9H0Q0 323 aaPredicted RBP9.89□□□□□ -0.83
COPB1-210ENST00000533533 C6orf50Q9HD87 102 aa9.89□□□□□ -0.83
COPB1-210ENST00000533533 JPH1Q9HDC5 661 aaPredicted RBP9.89□□□□□ -0.83
COPB1-210ENST00000533533 RIC8AQ9NPQ8 531 aa9.89□□□□□ -0.83
COPB1-210ENST00000533533 JADE2Q9NQC1 790 aa9.89□□□□□ -0.83
COPB1-210ENST00000533533 TMEM260Q9NX78 707 aa9.89□□□□□ -0.83
COPB1-210ENST00000533533 PCDHA6Q9UN73 950 aa9.89□□□□□ -0.83
COPB1-210ENST00000533533 LIMCH1Q9UPQ0 1083 aa9.89□□□□□ -0.83
COPB1-210ENST00000533533 PCDHA8Q9Y5H6 950 aa9.89□□□□□ -0.83
COPB1-210ENST00000533533 IGSF9BQ9UPX0 1349 aa9.88□□□□□ -0.83
COPB1-210ENST00000533533 M0QZ92 97 aa9.88□□□□□ -0.83
COPB1-210ENST00000533533 ST18O60284 1047 aa9.88□□□□□ -0.83
COPB1-210ENST00000533533 EYA4O95677 639 aa9.88□□□□□ -0.83
COPB1-210ENST00000533533 STAG3L1P0CL83 205 aa9.88□□□□□ -0.83
COPB1-210ENST00000533533 NDUFV1P49821 464 aa9.88□□□□□ -0.83
COPB1-210ENST00000533533 FOSBP53539 338 aa9.88□□□□□ -0.83
COPB1-210ENST00000533533 PKN1Q16512 942 aa9.88□□□□□ -0.83
COPB1-210ENST00000533533 CCDC83Q8IWF9 413 aa9.88□□□□□ -0.83
COPB1-210ENST00000533533 EFHBQ8N7U6 833 aa9.88□□□□□ -0.83
COPB1-210ENST00000533533 KLHL23Q8NBE8 558 aa9.88□□□□□ -0.83
COPB1-210ENST00000533533 SMRP1Q8NCR6 262 aa9.88□□□□□ -0.83
COPB1-210ENST00000533533 CCDC148Q8NFR7 591 aa9.88□□□□□ -0.83
COPB1-210ENST00000533533 EDAQ92838 391 aa9.88□□□□□ -0.83
COPB1-210ENST00000533533 TNPO1Q92973 898 aaKnown RBP9.88□□□□□ -0.83
COPB1-210ENST00000533533 GTF3C6Q969F1 213 aa9.88□□□□□ -0.83
COPB1-210ENST00000533533 KIF2CQ99661 725 aa9.88□□□□□ -0.83
COPB1-210ENST00000533533 BACH2Q9BYV9 841 aa9.88□□□□□ -0.83
COPB1-210ENST00000533533 GLT8D2Q9H1C3 349 aa9.88□□□□□ -0.83
COPB1-210ENST00000533533 AZI2Q9H6S1 392 aa9.88□□□□□ -0.83
COPB1-210ENST00000533533 CLEC1BQ9P126 229 aa9.88□□□□□ -0.83
COPB1-210ENST00000533533 ORC3Q9UBD5 711 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms