RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 GPM6BQ13491 265 aa17.45■□□□□ 0.38
CPSF1-211ENST00000533492 ODR4Q5SWX8 454 aa17.45■□□□□ 0.38
CPSF1-211ENST00000533492 LRCH2Q5VUJ6 765 aa17.45■□□□□ 0.38
CPSF1-211ENST00000533492 KIAA0319LQ8IZA0 1049 aa17.45■□□□□ 0.38
CPSF1-211ENST00000533492 DAGLBQ8NCG7 672 aa17.45■□□□□ 0.38
CPSF1-211ENST00000533492 ADAMTS19Q8TE59 1207 aa17.45■□□□□ 0.38
CPSF1-211ENST00000533492 NRBP2Q9NSY0 501 aa17.45■□□□□ 0.38
CPSF1-211ENST00000533492 TPCN1Q9ULQ1 816 aa17.45■□□□□ 0.38
CPSF1-211ENST00000533492 COL4A4P53420 1690 aaPredicted RBP17.45■□□□□ 0.38
CPSF1-211ENST00000533492 TTC3P53804 2025 aa17.44■□□□□ 0.38
CPSF1-211ENST00000533492 ZBTB42B2RXF5 422 aa17.44■□□□□ 0.38
CPSF1-211ENST00000533492 H3BNC9 293 aa17.44■□□□□ 0.38
CPSF1-211ENST00000533492 MAGEB2O15479 319 aa17.44■□□□□ 0.38
CPSF1-211ENST00000533492 PFKFB2O60825 505 aa17.44■□□□□ 0.38
CPSF1-211ENST00000533492 RPS6KA5O75582 802 aa17.44■□□□□ 0.38
CPSF1-211ENST00000533492 CENPBP07199 599 aaPredicted RBP17.44■□□□□ 0.38
CPSF1-211ENST00000533492 STAG3L1P0CL83 205 aa17.44■□□□□ 0.38
CPSF1-211ENST00000533492 SFNP31947 248 aa17.44■□□□□ 0.38
CPSF1-211ENST00000533492 BTG3Q14201 252 aaPredicted RBP17.44■□□□□ 0.38
CPSF1-211ENST00000533492 NONOQ15233 471 aaKnown RBP eCLIP17.44■□□□□ 0.38
CPSF1-211ENST00000533492 TMEM266Q2M3C6 531 aa17.44■□□□□ 0.38
CPSF1-211ENST00000533492 Q4G0T1 1027 aa17.44■□□□□ 0.38
CPSF1-211ENST00000533492 KRT25Q7Z3Z0 450 aa17.44■□□□□ 0.38
CPSF1-211ENST00000533492 RTN4RL1Q86UN2 441 aaPredicted RBP17.44■□□□□ 0.38
CPSF1-211ENST00000533492 SLC5A5Q92911 643 aa17.44■□□□□ 0.38
CPSF1-211ENST00000533492 UHRF1Q96T88 793 aaPredicted RBP17.44■□□□□ 0.38
CPSF1-211ENST00000533492 KCNJ14Q9UNX9 436 aa17.44■□□□□ 0.38
CPSF1-211ENST00000533492 RWDD3Q9Y3V2 267 aa17.44■□□□□ 0.38
CPSF1-211ENST00000533492 LOXHD1Q8IVV2 1947 aa17.44■□□□□ 0.38
CPSF1-211ENST00000533492 TTC28Q96AY4 2481 aa17.44■□□□□ 0.38
CPSF1-211ENST00000533492 CYP3A7-CYP3A51PA0A087WV96 503 aa17.43■□□□□ 0.38
CPSF1-211ENST00000533492 CCDC194A0A1B0GVG4 234 aa17.43■□□□□ 0.38
CPSF1-211ENST00000533492 M0R2N6 131 aa17.43■□□□□ 0.38
CPSF1-211ENST00000533492 TNFRSF10AO00220 468 aa17.43■□□□□ 0.38
CPSF1-211ENST00000533492 TDP2O95551 362 aa17.43■□□□□ 0.38
CPSF1-211ENST00000533492 C22orf31O95567 290 aa17.43■□□□□ 0.38
CPSF1-211ENST00000533492 CYP3A7P24462 503 aa17.43■□□□□ 0.38
CPSF1-211ENST00000533492 TMOD1P28289 359 aa17.43■□□□□ 0.38
CPSF1-211ENST00000533492 CTNNB1P35222 781 aa17.43■□□□□ 0.38
CPSF1-211ENST00000533492 JAK3P52333 1124 aa17.43■□□□□ 0.38
CPSF1-211ENST00000533492 LINC01599Q8WXQ3 324 aa17.43■□□□□ 0.38
CPSF1-211ENST00000533492 GJA10Q969M2 543 aa17.43■□□□□ 0.38
CPSF1-211ENST00000533492 MRPL38Q96DV4 380 aaKnown RBP17.43■□□□□ 0.38
CPSF1-211ENST00000533492 CDHR5Q9HBB8 845 aa17.43■□□□□ 0.38
CPSF1-211ENST00000533492 LRFN2Q9ULH4 789 aa17.43■□□□□ 0.38
CPSF1-211ENST00000533492 ADGRA3Q8IWK6 1321 aa17.43■□□□□ 0.38
CPSF1-211ENST00000533492 TCF20Q9UGU0 1960 aaKnown RBP17.42■□□□□ 0.38
CPSF1-211ENST00000533492 REV3LO60673 3130 aa17.42■□□□□ 0.38
CPSF1-211ENST00000533492 GPR182O15218 404 aa17.42■□□□□ 0.38
CPSF1-211ENST00000533492 DGKIO75912 1065 aa17.42■□□□□ 0.38
CPSF1-211ENST00000533492 OATP04181 439 aa17.42■□□□□ 0.38
CPSF1-211ENST00000533492 RB1P06400 928 aa17.42■□□□□ 0.38
CPSF1-211ENST00000533492 BMP1P13497 986 aa17.42■□□□□ 0.38
CPSF1-211ENST00000533492 IBSPP21815 317 aaPredicted RBP17.42■□□□□ 0.38
CPSF1-211ENST00000533492 KCNQ1P51787 676 aa17.42■□□□□ 0.38
CPSF1-211ENST00000533492 CRYBB1P53674 252 aaPredicted RBP17.42■□□□□ 0.38
CPSF1-211ENST00000533492 AK2P54819 239 aa17.42■□□□□ 0.38
CPSF1-211ENST00000533492 NPY5RQ15761 445 aa17.42■□□□□ 0.38
CPSF1-211ENST00000533492 INF2Q27J81 1249 aa17.42■□□□□ 0.38
CPSF1-211ENST00000533492 KIZQ2M2Z5 673 aa17.42■□□□□ 0.38
CPSF1-211ENST00000533492 EFCAB12Q6NXP0 572 aa17.42■□□□□ 0.38
CPSF1-211ENST00000533492 MOXD1Q6UVY6 613 aa17.42■□□□□ 0.38
CPSF1-211ENST00000533492 FAM43BQ6ZT52 329 aaPredicted RBP17.42■□□□□ 0.38
CPSF1-211ENST00000533492 MIER3Q7Z3K6 550 aa17.42■□□□□ 0.38
CPSF1-211ENST00000533492 NPAS4Q8IUM7 802 aa17.42■□□□□ 0.38
CPSF1-211ENST00000533492 RDM1Q8NG50 284 aa17.42■□□□□ 0.38
CPSF1-211ENST00000533492 WASF1Q92558 559 aa17.42■□□□□ 0.38
CPSF1-211ENST00000533492 MAP7D2Q96T17 732 aa17.42■□□□□ 0.38
CPSF1-211ENST00000533492 PPP1R16BQ96T49 567 aa17.42■□□□□ 0.38
CPSF1-211ENST00000533492 UNC45AQ9H3U1 944 aa17.42■□□□□ 0.38
CPSF1-211ENST00000533492 NOC2LQ9Y3T9 749 aaKnown RBP17.42■□□□□ 0.38
CPSF1-211ENST00000533492 STK36Q9NRP7 1315 aa17.42■□□□□ 0.38
CPSF1-211ENST00000533492 DENND3A2RUS2 1198 aa17.41■□□□□ 0.38
CPSF1-211ENST00000533492 PSMD10O75832 226 aa17.41■□□□□ 0.38
CPSF1-211ENST00000533492 VTNP04004 478 aa17.41■□□□□ 0.38
CPSF1-211ENST00000533492 BMPR1AP36894 532 aa17.41■□□□□ 0.38
CPSF1-211ENST00000533492 PRKCEQ02156 737 aa17.41■□□□□ 0.38
CPSF1-211ENST00000533492 LETM2Q2VYF4 491 aa17.41■□□□□ 0.38
CPSF1-211ENST00000533492 ZNF689Q96CS4 500 aaPredicted RBP17.41■□□□□ 0.38
CPSF1-211ENST00000533492 OSMRQ99650 979 aa17.41■□□□□ 0.38
CPSF1-211ENST00000533492 C11orf84Q9BUA3 381 aaPredicted RBP17.41■□□□□ 0.38
CPSF1-211ENST00000533492 PHF20Q9BVI0 1012 aa17.41■□□□□ 0.38
CPSF1-211ENST00000533492 TMX1Q9H3N1 280 aa17.41■□□□□ 0.38
CPSF1-211ENST00000533492 ERVK-5Q9HDB9 667 aa17.41■□□□□ 0.38
CPSF1-211ENST00000533492 RNF216Q9NWF9 866 aaPredicted RBP17.41■□□□□ 0.38
CPSF1-211ENST00000533492 ORC3Q9UBD5 711 aaPredicted RBP17.41■□□□□ 0.38
CPSF1-211ENST00000533492 DDX25Q9UHL0 483 aaKnown RBP17.41■□□□□ 0.38
CPSF1-211ENST00000533492 AKT3Q9Y243 479 aa17.41■□□□□ 0.38
CPSF1-211ENST00000533492 NLRC5Q86WI3 1866 aa17.4■□□□□ 0.38
CPSF1-211ENST00000533492 COL4A6Q14031 1691 aa17.4■□□□□ 0.38
CPSF1-211ENST00000533492 ZNF862O60290 1169 aa17.4■□□□□ 0.38
CPSF1-211ENST00000533492 CLCN3P51790 818 aa17.4■□□□□ 0.38
CPSF1-211ENST00000533492 TIGD5Q53EQ6 642 aa17.4■□□□□ 0.38
CPSF1-211ENST00000533492 ZNF710Q8N1W2 664 aa17.4■□□□□ 0.38
CPSF1-211ENST00000533492 BANK1Q8NDB2 785 aa17.4■□□□□ 0.38
CPSF1-211ENST00000533492 TMEM40Q8WWA1 233 aa17.4■□□□□ 0.38
CPSF1-211ENST00000533492 RC3H2Q9HBD1 1191 aaKnown RBP17.4■□□□□ 0.38
CPSF1-211ENST00000533492 ST3GAL5Q9UNP4 418 aa17.4■□□□□ 0.38
CPSF1-211ENST00000533492 PCDHB7Q9Y5E2 793 aa17.4■□□□□ 0.38
CPSF1-211ENST00000533492 WDR81Q562E7 1941 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms