RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 STAM2O75886 525 aa9.3□□□□□ -0.92
NEDD8-207ENST00000533242 MMP1P03956 469 aa9.3□□□□□ -0.92
NEDD8-207ENST00000533242 PTPN5P54829 565 aa9.3□□□□□ -0.92
NEDD8-207ENST00000533242 ADAM17P78536 824 aa9.3□□□□□ -0.92
NEDD8-207ENST00000533242 NOLC1Q14978 699 aaKnown RBP eCLIP9.3□□□□□ -0.92
NEDD8-207ENST00000533242 NCOA7Q8NI08 942 aa9.3□□□□□ -0.92
NEDD8-207ENST00000533242 GPKOWQ92917 476 aaPredicted RBP eCLIP9.3□□□□□ -0.92
NEDD8-207ENST00000533242 CLP1Q92989 425 aaKnown RBP9.3□□□□□ -0.92
NEDD8-207ENST00000533242 PLVAPQ9BX97 442 aa9.3□□□□□ -0.92
NEDD8-207ENST00000533242 RC3H2Q9HBD1 1191 aaKnown RBP9.3□□□□□ -0.92
NEDD8-207ENST00000533242 PCDHA7Q9UN72 937 aa9.3□□□□□ -0.92
NEDD8-207ENST00000533242 PCDHA1Q9Y5I3 950 aa9.3□□□□□ -0.92
NEDD8-207ENST00000533242 TTC3P53804 2025 aa9.3□□□□□ -0.92
NEDD8-207ENST00000533242 FRMPD4Q14CM0 1322 aa9.3□□□□□ -0.92
NEDD8-207ENST00000533242 GCOM1H8Y6P7 765 aaPredicted RBP9.3□□□□□ -0.92
NEDD8-207ENST00000533242 ZBTB5O15062 677 aa9.3□□□□□ -0.92
NEDD8-207ENST00000533242 TBX10O75333 385 aa9.3□□□□□ -0.92
NEDD8-207ENST00000533242 TPM2P07951 284 aa9.3□□□□□ -0.92
NEDD8-207ENST00000533242 POLR2MP0CAP2 368 aa9.3□□□□□ -0.92
NEDD8-207ENST00000533242 CDC27P30260 824 aa9.3□□□□□ -0.92
NEDD8-207ENST00000533242 HOXA13P31271 388 aaPredicted RBP9.3□□□□□ -0.92
NEDD8-207ENST00000533242 ZNF165P49910 485 aa9.3□□□□□ -0.92
NEDD8-207ENST00000533242 RBM10P98175 930 aaKnown RBP9.3□□□□□ -0.92
NEDD8-207ENST00000533242 DLX2Q07687 328 aaPredicted RBP9.3□□□□□ -0.92
NEDD8-207ENST00000533242 LRMPQ12912 555 aa9.3□□□□□ -0.92
NEDD8-207ENST00000533242 ADAM15Q13444 863 aa9.3□□□□□ -0.92
NEDD8-207ENST00000533242 NEDD9Q14511 834 aa9.3□□□□□ -0.92
NEDD8-207ENST00000533242 IQCB1Q15051 598 aa9.3□□□□□ -0.92
NEDD8-207ENST00000533242 CLUL1Q15846 466 aa9.3□□□□□ -0.92
NEDD8-207ENST00000533242 GNPTABQ3T906 1256 aa9.3□□□□□ -0.92
NEDD8-207ENST00000533242 METTL7BQ6UX53 244 aa9.3□□□□□ -0.92
NEDD8-207ENST00000533242 PRSS33Q8NF86 280 aa9.3□□□□□ -0.92
NEDD8-207ENST00000533242 SNX27Q96L92 541 aa9.3□□□□□ -0.92
NEDD8-207ENST00000533242 GPR20Q99678 358 aa9.3□□□□□ -0.92
NEDD8-207ENST00000533242 MYL10Q9BUA6 226 aa9.3□□□□□ -0.92
NEDD8-207ENST00000533242 KRT23Q9C075 422 aa9.3□□□□□ -0.92
NEDD8-207ENST00000533242 SETD4Q9NVD3 440 aa9.3□□□□□ -0.92
NEDD8-207ENST00000533242 ZSWIM5Q9P217 1185 aa9.3□□□□□ -0.92
NEDD8-207ENST00000533242 ORC3Q9UBD5 711 aaPredicted RBP9.3□□□□□ -0.92
NEDD8-207ENST00000533242 ZNF215Q9UL58 517 aaPredicted RBP9.3□□□□□ -0.92
NEDD8-207ENST00000533242 LOXHD1Q8IVV2 1947 aa9.29□□□□□ -0.92
NEDD8-207ENST00000533242 UQCRHLA0A096LP55 91 aa9.29□□□□□ -0.92
NEDD8-207ENST00000533242 A0A1B0GVL5 298 aa9.29□□□□□ -0.92
NEDD8-207ENST00000533242 TMEM221A6NGB7 291 aa9.29□□□□□ -0.92
NEDD8-207ENST00000533242 KLRF2D3W0D1 207 aa9.29□□□□□ -0.92
NEDD8-207ENST00000533242 M0R296 226 aa9.29□□□□□ -0.92
NEDD8-207ENST00000533242 UQCRHP07919 91 aa9.29□□□□□ -0.92
NEDD8-207ENST00000533242 ME1P48163 572 aa9.29□□□□□ -0.92
NEDD8-207ENST00000533242 ARHGAP4P98171 946 aa9.29□□□□□ -0.92
NEDD8-207ENST00000533242 NAALADL2Q58DX5 795 aa9.29□□□□□ -0.92
NEDD8-207ENST00000533242 RALYLQ86SE5 291 aaKnown RBP9.29□□□□□ -0.92
NEDD8-207ENST00000533242 STAG2Q8N3U4 1231 aa9.29□□□□□ -0.92
NEDD8-207ENST00000533242 FBXO18Q8NFZ0 1043 aa9.29□□□□□ -0.92
NEDD8-207ENST00000533242 TSC1Q92574 1164 aa9.29□□□□□ -0.92
NEDD8-207ENST00000533242 PHKBQ93100 1093 aa9.29□□□□□ -0.92
NEDD8-207ENST00000533242 ZNF689Q96CS4 500 aaPredicted RBP9.29□□□□□ -0.92
NEDD8-207ENST00000533242 EHMT1Q9H9B1 1298 aa9.29□□□□□ -0.92
NEDD8-207ENST00000533242 PLXNA4Q9HCM2 1894 aa9.29□□□□□ -0.92
NEDD8-207ENST00000533242 SPATA31C2B4DYI2 1134 aa9.28□□□□□ -0.92
NEDD8-207ENST00000533242 EYA4O95677 639 aa9.28□□□□□ -0.92
NEDD8-207ENST00000533242 CHRNA1P02708 482 aa9.28□□□□□ -0.92
NEDD8-207ENST00000533242 NDUFA8P51970 172 aa9.28□□□□□ -0.92
NEDD8-207ENST00000533242 MGAT3Q09327 533 aa9.28□□□□□ -0.92
NEDD8-207ENST00000533242 SASS6Q6UVJ0 657 aa9.28□□□□□ -0.92
NEDD8-207ENST00000533242 PLA2G4DQ86XP0 818 aa9.28□□□□□ -0.92
NEDD8-207ENST00000533242 FSIP1Q8NA03 581 aa9.28□□□□□ -0.92
NEDD8-207ENST00000533242 LINC00301Q8NCQ3 95 aa9.28□□□□□ -0.92
NEDD8-207ENST00000533242 KIAA1524Q8TCG1 905 aa9.28□□□□□ -0.92
NEDD8-207ENST00000533242 LMBR1Q8WVP7 490 aa9.28□□□□□ -0.92
NEDD8-207ENST00000533242 P2RX5Q93086 422 aa9.28□□□□□ -0.92
NEDD8-207ENST00000533242 PPP2R3CQ969Q6 453 aa9.28□□□□□ -0.92
NEDD8-207ENST00000533242 C8orf76Q96K31 380 aa9.28□□□□□ -0.92
NEDD8-207ENST00000533242 MSLNLQ96KJ4 702 aa9.28□□□□□ -0.92
NEDD8-207ENST00000533242 UBAC1Q9BSL1 405 aa9.28□□□□□ -0.92
NEDD8-207ENST00000533242 IGFLR1Q9H665 355 aa9.28□□□□□ -0.92
NEDD8-207ENST00000533242 BCAS3Q9H6U6 928 aa9.28□□□□□ -0.92
NEDD8-207ENST00000533242 CNNM2Q9H8M5 875 aa9.28□□□□□ -0.92
NEDD8-207ENST00000533242 FAM217BQ9NTX9 383 aaPredicted RBP9.28□□□□□ -0.92
NEDD8-207ENST00000533242 TECTAO75443 2155 aa9.28□□□□□ -0.92
NEDD8-207ENST00000533242 NRCAMQ92823 1304 aa9.28□□□□□ -0.92
NEDD8-207ENST00000533242 PALM3A6NDB9 673 aaPredicted RBP9.28□□□□□ -0.92
NEDD8-207ENST00000533242 SH2B2O14492 632 aaPredicted RBP9.28□□□□□ -0.92
NEDD8-207ENST00000533242 ENPP3O14638 875 aa9.28□□□□□ -0.92
NEDD8-207ENST00000533242 LINC01565O15544 149 aa9.28□□□□□ -0.92
NEDD8-207ENST00000533242 GTF2F1P35269 517 aaKnown RBP eCLIP9.28□□□□□ -0.92
NEDD8-207ENST00000533242 ZNF75DP51815 510 aa9.28□□□□□ -0.92
NEDD8-207ENST00000533242 BTG3Q14201 252 aaPredicted RBP9.28□□□□□ -0.92
NEDD8-207ENST00000533242 IFIT1BQ5T764 474 aaKnown RBP9.28□□□□□ -0.92
NEDD8-207ENST00000533242 TAF2Q6P1X5 1199 aa9.28□□□□□ -0.92
NEDD8-207ENST00000533242 APOA5Q6Q788 366 aa9.28□□□□□ -0.92
NEDD8-207ENST00000533242 TRIM67Q6ZTA4 783 aa9.28□□□□□ -0.92
NEDD8-207ENST00000533242 FCHSD1Q86WN1 690 aa9.28□□□□□ -0.92
NEDD8-207ENST00000533242 FMR1NBQ8N0W7 255 aaPredicted RBP9.28□□□□□ -0.92
NEDD8-207ENST00000533242 EFHBQ8N7U6 833 aa9.28□□□□□ -0.92
NEDD8-207ENST00000533242 ZFP91Q96JP5 570 aaPredicted RBP9.28□□□□□ -0.92
NEDD8-207ENST00000533242 INPP4AQ96PE3 977 aaPredicted RBP9.28□□□□□ -0.92
NEDD8-207ENST00000533242 SPTLC3Q9NUV7 552 aa9.28□□□□□ -0.92
NEDD8-207ENST00000533242 RTEL1Q9NZ71 1219 aa9.28□□□□□ -0.92
NEDD8-207ENST00000533242 MAD2L2Q9UI95 211 aa9.28□□□□□ -0.92
NEDD8-207ENST00000533242 PLAGL2Q9UPG8 496 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms