RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 SYNRGQ9UMZ2 1314 aa20.55■□□□□ 0.88
SMPD1-208ENST00000533123 DYNC1LI2O43237 492 aaPredicted RBP20.54■□□□□ 0.88
SMPD1-208ENST00000533123 ZNF862O60290 1169 aa20.54■□□□□ 0.88
SMPD1-208ENST00000533123 TPM2P07951 284 aa20.54■□□□□ 0.88
SMPD1-208ENST00000533123 OR6J1Q8NGC5 347 aa20.54■□□□□ 0.88
SMPD1-208ENST00000533123 ATP6V0A1Q93050 837 aa20.54■□□□□ 0.88
SMPD1-208ENST00000533123 ZNF302Q9NR11 478 aa20.54■□□□□ 0.88
SMPD1-208ENST00000533123 MYH9P35579 1960 aaKnown RBP20.54■□□□□ 0.88
SMPD1-208ENST00000533123 IGKV6D-21A0A0A0MT36 114 aa20.54■□□□□ 0.88
SMPD1-208ENST00000533123 TMEM150BA6NC51 233 aa20.54■□□□□ 0.88
SMPD1-208ENST00000533123 NKRFO15226 690 aaKnown RBP eCLIP20.54■□□□□ 0.88
SMPD1-208ENST00000533123 CNGA1P29973 690 aa20.54■□□□□ 0.88
SMPD1-208ENST00000533123 SLC12A3P55017 1021 aa20.54■□□□□ 0.88
SMPD1-208ENST00000533123 ASIC1P78348 528 aa20.54■□□□□ 0.88
SMPD1-208ENST00000533123 UTP14CQ5TAP6 766 aaKnown RBP20.54■□□□□ 0.88
SMPD1-208ENST00000533123 C4orf19Q8IY42 314 aa20.54■□□□□ 0.88
SMPD1-208ENST00000533123 EMID1Q96A84 441 aaPredicted RBP20.54■□□□□ 0.88
SMPD1-208ENST00000533123 C7orf25Q9BPX7 421 aa20.54■□□□□ 0.88
SMPD1-208ENST00000533123 SH2D3AQ9BRG2 576 aa20.54■□□□□ 0.88
SMPD1-208ENST00000533123 EYA4O95677 639 aa20.53■□□□□ 0.88
SMPD1-208ENST00000533123 PRKAR2AP13861 404 aaKnown RBP20.53■□□□□ 0.88
SMPD1-208ENST00000533123 YWHABP31946 246 aaKnown RBP20.53■□□□□ 0.88
SMPD1-208ENST00000533123 CCDC186Q7Z3E2 898 aa20.53■□□□□ 0.88
SMPD1-208ENST00000533123 TRIM50Q86XT4 487 aa20.53■□□□□ 0.88
SMPD1-208ENST00000533123 KCTD17Q8N5Z5 321 aa20.53■□□□□ 0.88
SMPD1-208ENST00000533123 PPTC7Q8NI37 304 aa20.53■□□□□ 0.88
SMPD1-208ENST00000533123 SAMSN1Q9NSI8 373 aaKnown RBP20.53■□□□□ 0.88
SMPD1-208ENST00000533123 MAFBQ9Y5Q3 323 aaPredicted RBP20.53■□□□□ 0.88
SMPD1-208ENST00000533123 MYMKA6NI61 221 aa20.53■□□□□ 0.88
SMPD1-208ENST00000533123 GOLGA6L6A8MZA4 724 aa20.53■□□□□ 0.88
SMPD1-208ENST00000533123 LYPLA2O95372 231 aa20.53■□□□□ 0.88
SMPD1-208ENST00000533123 AKR1A1P14550 325 aa20.53■□□□□ 0.88
SMPD1-208ENST00000533123 STAT5BP51692 787 aa20.53■□□□□ 0.88
SMPD1-208ENST00000533123 KCNB1Q14721 858 aa20.53■□□□□ 0.88
SMPD1-208ENST00000533123 SYT2Q8N9I0 419 aaPredicted RBP20.53■□□□□ 0.88
SMPD1-208ENST00000533123 PXYLP1Q8TE99 480 aa20.53■□□□□ 0.88
SMPD1-208ENST00000533123 KCNF1Q9H3M0 494 aa20.53■□□□□ 0.88
SMPD1-208ENST00000533123 IGSF9BQ9UPX0 1349 aa20.52■□□□□ 0.88
SMPD1-208ENST00000533123 HMGCRP04035 888 aa20.52■□□□□ 0.88
SMPD1-208ENST00000533123 ZNF18P17022 549 aa20.52■□□□□ 0.88
SMPD1-208ENST00000533123 ATP4AP20648 1035 aa20.52■□□□□ 0.88
SMPD1-208ENST00000533123 PRCPP42785 496 aa20.52■□□□□ 0.88
SMPD1-208ENST00000533123 AMPD3Q01432 767 aa20.52■□□□□ 0.88
SMPD1-208ENST00000533123 TLK2Q86UE8 772 aa20.52■□□□□ 0.88
SMPD1-208ENST00000533123 GLG1Q92896 1179 aa20.52■□□□□ 0.88
SMPD1-208ENST00000533123 AZI2Q9H6S1 392 aa20.52■□□□□ 0.88
SMPD1-208ENST00000533123 PTCH2Q9Y6C5 1203 aa20.52■□□□□ 0.88
SMPD1-208ENST00000533123 RHOBTB3O94955 611 aa20.51■□□□□ 0.87
SMPD1-208ENST00000533123 SERPINC1P01008 464 aa20.51■□□□□ 0.87
SMPD1-208ENST00000533123 MSNP26038 577 aaKnown RBP20.51■□□□□ 0.87
SMPD1-208ENST00000533123 CCND3P30281 292 aaPredicted RBP20.51■□□□□ 0.87
SMPD1-208ENST00000533123 PRMT2P55345 433 aa20.51■□□□□ 0.87
SMPD1-208ENST00000533123 IRX5P78411 483 aaPredicted RBP20.51■□□□□ 0.87
SMPD1-208ENST00000533123 PRKCEQ02156 737 aa20.51■□□□□ 0.87
SMPD1-208ENST00000533123 ANO5Q75V66 913 aa20.51■□□□□ 0.87
SMPD1-208ENST00000533123 DYMQ7RTS9 669 aa20.51■□□□□ 0.87
SMPD1-208ENST00000533123 RAD51AP2Q09MP3 1159 aa20.51■□□□□ 0.87
SMPD1-208ENST00000533123 CT47A1Q5JQC4 288 aaPredicted RBP20.51■□□□□ 0.87
SMPD1-208ENST00000533123 PLA2G4FQ68DD2 849 aa20.51■□□□□ 0.87
SMPD1-208ENST00000533123 GPBP1Q86WP2 473 aa20.51■□□□□ 0.87
SMPD1-208ENST00000533123 DDX12PQ92771 950 aa20.51■□□□□ 0.87
SMPD1-208ENST00000533123 DKC1O60832 514 aaKnown RBP eCLIP20.5■□□□□ 0.87
SMPD1-208ENST00000533123 STBD1O95210 358 aa20.5■□□□□ 0.87
SMPD1-208ENST00000533123 CYP11B2P19099 503 aa20.5■□□□□ 0.87
SMPD1-208ENST00000533123 ARSHQ5FYA8 562 aa20.5■□□□□ 0.87
SMPD1-208ENST00000533123 SPATA1Q5VX52 437 aa20.5■□□□□ 0.87
SMPD1-208ENST00000533123 FAM160B1Q5W0V3 765 aa20.5■□□□□ 0.87
SMPD1-208ENST00000533123 AFAP1L1Q8TED9 768 aa20.5■□□□□ 0.87
SMPD1-208ENST00000533123 NELFBQ8WX92 580 aa20.5■□□□□ 0.87
SMPD1-208ENST00000533123 HPS3Q969F9 1004 aa20.5■□□□□ 0.87
SMPD1-208ENST00000533123 NPHP3-ACAD11A0A0J9YXS1 232 aa20.5■□□□□ 0.87
SMPD1-208ENST00000533123 LGR5O75473 907 aa20.5■□□□□ 0.87
SMPD1-208ENST00000533123 MMP3P08254 477 aa20.5■□□□□ 0.87
SMPD1-208ENST00000533123 MARK3P27448 753 aa20.5■□□□□ 0.87
SMPD1-208ENST00000533123 RARRES1P49788 294 aa20.5■□□□□ 0.87
SMPD1-208ENST00000533123 NPEPPSP55786 919 aa20.5■□□□□ 0.87
SMPD1-208ENST00000533123 EXOC1Q9NV70 894 aa20.5■□□□□ 0.87
SMPD1-208ENST00000533123 SEPT4O43236 478 aa20.49■□□□□ 0.87
SMPD1-208ENST00000533123 PPFIA4O75335 1185 aa20.49■□□□□ 0.87
SMPD1-208ENST00000533123 OFD1O75665 1012 aa20.49■□□□□ 0.87
SMPD1-208ENST00000533123 GRK4P32298 578 aa20.49■□□□□ 0.87
SMPD1-208ENST00000533123 UBASH3AP57075 661 aa20.49■□□□□ 0.87
SMPD1-208ENST00000533123 PAK1Q13153 545 aa20.49■□□□□ 0.87
SMPD1-208ENST00000533123 PTPN21Q16825 1174 aa20.49■□□□□ 0.87
SMPD1-208ENST00000533123 RINT1Q6NUQ1 792 aa20.49■□□□□ 0.87
SMPD1-208ENST00000533123 FILIP1Q7Z7B0 1213 aa20.49■□□□□ 0.87
SMPD1-208ENST00000533123 SLAIN1Q8ND83 568 aa20.49■□□□□ 0.87
SMPD1-208ENST00000533123 RUSC1Q9BVN2 902 aa20.49■□□□□ 0.87
SMPD1-208ENST00000533123 SEPT9Q9UHD8 586 aaPredicted RBP20.49■□□□□ 0.87
SMPD1-208ENST00000533123 DBR1Q9UK59 544 aaKnown RBP20.49■□□□□ 0.87
SMPD1-208ENST00000533123 ARHGEF35A5YM69 484 aa20.49■□□□□ 0.87
SMPD1-208ENST00000533123 LGALS2P05162 132 aa20.49■□□□□ 0.87
SMPD1-208ENST00000533123 ZNF286BP0CG31 522 aa20.49■□□□□ 0.87
SMPD1-208ENST00000533123 CACNB1Q02641 598 aaPredicted RBP20.49■□□□□ 0.87
SMPD1-208ENST00000533123 XKR9Q5GH70 373 aa20.49■□□□□ 0.87
SMPD1-208ENST00000533123 XKR3Q5GH77 459 aa20.49■□□□□ 0.87
SMPD1-208ENST00000533123 MAP3K21Q5TCX8 1036 aa20.49■□□□□ 0.87
SMPD1-208ENST00000533123 ADSSL1Q8N142 457 aa20.49■□□□□ 0.87
SMPD1-208ENST00000533123 CCDC43Q96MW1 224 aaKnown RBP20.49■□□□□ 0.87
SMPD1-208ENST00000533123 LRRC27Q9C0I9 530 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms