RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 KDM3AQ9Y4C1 1321 aa12.56□□□□□ -0.4
TRAPPC4-211ENST00000533012 A0A087WWV3 80 aa12.55□□□□□ -0.4
TRAPPC4-211ENST00000533012 ZBTB39O15060 712 aa12.55□□□□□ -0.4
TRAPPC4-211ENST00000533012 ADAM17P78536 824 aa12.55□□□□□ -0.4
TRAPPC4-211ENST00000533012 PTK7Q13308 1070 aa12.55□□□□□ -0.4
TRAPPC4-211ENST00000533012 HIC1Q14526 733 aa12.55□□□□□ -0.4
TRAPPC4-211ENST00000533012 TARBP2Q15633 366 aaKnown RBP12.55□□□□□ -0.4
TRAPPC4-211ENST00000533012 ECM1Q16610 540 aa12.55□□□□□ -0.4
TRAPPC4-211ENST00000533012 HYIQ5T013 277 aa12.55□□□□□ -0.4
TRAPPC4-211ENST00000533012 MARCH8Q5T0T0 291 aa12.55□□□□□ -0.4
TRAPPC4-211ENST00000533012 TAF2Q6P1X5 1199 aa12.55□□□□□ -0.4
TRAPPC4-211ENST00000533012 POTEGQ6S5H5 508 aa12.55□□□□□ -0.4
TRAPPC4-211ENST00000533012 MTHFD1LQ6UB35 978 aa12.55□□□□□ -0.4
TRAPPC4-211ENST00000533012 C7orf61Q8IZ16 206 aa12.55□□□□□ -0.4
TRAPPC4-211ENST00000533012 RETREG2Q8NC44 543 aa12.55□□□□□ -0.4
TRAPPC4-211ENST00000533012 TRAPPC12Q8WVT3 735 aa12.55□□□□□ -0.4
TRAPPC4-211ENST00000533012 SYMPKQ92797 1274 aaKnown RBP12.55□□□□□ -0.4
TRAPPC4-211ENST00000533012 CCDC43Q96MW1 224 aaKnown RBP12.55□□□□□ -0.4
TRAPPC4-211ENST00000533012 DDX19AQ9NUU7 478 aaKnown RBP12.55□□□□□ -0.4
TRAPPC4-211ENST00000533012 TUBE1Q9UJT0 475 aa12.55□□□□□ -0.4
TRAPPC4-211ENST00000533012 NR2E3Q9Y5X4 410 aa12.55□□□□□ -0.4
TRAPPC4-211ENST00000533012 MBLAC1A4D2B0 266 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC4-211ENST00000533012 TMEM150BA6NC51 233 aa12.54□□□□□ -0.4
TRAPPC4-211ENST00000533012 ZBTB42B2RXF5 422 aa12.54□□□□□ -0.4
TRAPPC4-211ENST00000533012 RPLP2P05387 115 aaKnown RBP12.54□□□□□ -0.4
TRAPPC4-211ENST00000533012 CYP2C9P11712 490 aa12.54□□□□□ -0.4
TRAPPC4-211ENST00000533012 TMOD1P28289 359 aa12.54□□□□□ -0.4
TRAPPC4-211ENST00000533012 NPEPPSP55786 919 aa12.54□□□□□ -0.4
TRAPPC4-211ENST00000533012 TBC1D8BQ0IIM8 1120 aa12.54□□□□□ -0.4
TRAPPC4-211ENST00000533012 BFSP2Q13515 415 aa12.54□□□□□ -0.4
TRAPPC4-211ENST00000533012 CSPP1Q1MSJ5 1256 aa12.54□□□□□ -0.4
TRAPPC4-211ENST00000533012 PLA2G4FQ68DD2 849 aa12.54□□□□□ -0.4
TRAPPC4-211ENST00000533012 ADALQ6DHV7 355 aa12.54□□□□□ -0.4
TRAPPC4-211ENST00000533012 SERINC5Q86VE9 423 aa12.54□□□□□ -0.4
TRAPPC4-211ENST00000533012 CCDC155Q8N6L0 562 aa12.54□□□□□ -0.4
TRAPPC4-211ENST00000533012 METTL13Q8N6R0 699 aa12.54□□□□□ -0.4
TRAPPC4-211ENST00000533012 PLIN2Q99541 437 aa12.54□□□□□ -0.4
TRAPPC4-211ENST00000533012 JPH2Q9BR39 696 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC4-211ENST00000533012 SH2D3AQ9BRG2 576 aa12.54□□□□□ -0.4
TRAPPC4-211ENST00000533012 PRDM5Q9NQX1 630 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC4-211ENST00000533012 FAM13BQ9NYF5 915 aa12.54□□□□□ -0.4
TRAPPC4-211ENST00000533012 DBR1Q9UK59 544 aaKnown RBP12.54□□□□□ -0.4
TRAPPC4-211ENST00000533012 PCDHA2Q9Y5H9 948 aa12.54□□□□□ -0.4
TRAPPC4-211ENST00000533012 DOCK5Q9H7D0 1870 aa12.54□□□□□ -0.4
TRAPPC4-211ENST00000533012 DNAH12Q6ZR08 3092 aa12.53□□□□□ -0.4
TRAPPC4-211ENST00000533012 SMIM35A0A1B0GVV1 85 aa12.53□□□□□ -0.4
TRAPPC4-211ENST00000533012 ARHGEF35A5YM69 484 aa12.53□□□□□ -0.4
TRAPPC4-211ENST00000533012 KIAA0355O15063 1070 aa12.53□□□□□ -0.4
TRAPPC4-211ENST00000533012 MAFO75444 373 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC4-211ENST00000533012 RFC5P40937 340 aa12.53□□□□□ -0.4
TRAPPC4-211ENST00000533012 RARRES1P49788 294 aa12.53□□□□□ -0.4
TRAPPC4-211ENST00000533012 DNM2P50570 870 aa12.53□□□□□ -0.4
TRAPPC4-211ENST00000533012 MLLT1Q03111 559 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC4-211ENST00000533012 GRB10Q13322 594 aa12.53□□□□□ -0.4
TRAPPC4-211ENST00000533012 KARSQ15046 597 aaKnown RBP12.53□□□□□ -0.4
TRAPPC4-211ENST00000533012 AXDND1Q5T1B0 1012 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC4-211ENST00000533012 RRAGBQ5VZM2 374 aa12.53□□□□□ -0.4
TRAPPC4-211ENST00000533012 EFCAB12Q6NXP0 572 aa12.53□□□□□ -0.4
TRAPPC4-211ENST00000533012 SHC4Q6S5L8 630 aa12.53□□□□□ -0.4
TRAPPC4-211ENST00000533012 USP49Q70CQ1 688 aa12.53□□□□□ -0.4
TRAPPC4-211ENST00000533012 RSPH3Q86UC2 560 aa12.53□□□□□ -0.4
TRAPPC4-211ENST00000533012 NME8Q8N427 588 aa12.53□□□□□ -0.4
TRAPPC4-211ENST00000533012 CAGE1Q8TC20 777 aa12.53□□□□□ -0.4
TRAPPC4-211ENST00000533012 SLC7A3Q8WY07 619 aa12.53□□□□□ -0.4
TRAPPC4-211ENST00000533012 PNMA5Q96PV4 448 aa12.53□□□□□ -0.4
TRAPPC4-211ENST00000533012 PANK2Q9BZ23 570 aa12.53□□□□□ -0.4
TRAPPC4-211ENST00000533012 SUGCTQ9HAC7 445 aa12.53□□□□□ -0.4
TRAPPC4-211ENST00000533012 GDPD2Q9HCC8 539 aa12.53□□□□□ -0.4
TRAPPC4-211ENST00000533012 PDLIM7Q9NR12 457 aa12.53□□□□□ -0.4
TRAPPC4-211ENST00000533012 MKI67P46013 3256 aaKnown RBP12.52□□□□□ -0.4
TRAPPC4-211ENST00000533012 GOLGA6L4A6NEF3 574 aa12.52□□□□□ -0.41
TRAPPC4-211ENST00000533012 E9PMD0 336 aa12.52□□□□□ -0.41
TRAPPC4-211ENST00000533012 DGAT1O75907 488 aa12.52□□□□□ -0.41
TRAPPC4-211ENST00000533012 C22orf31O95567 290 aa12.52□□□□□ -0.41
TRAPPC4-211ENST00000533012 EYA4O95677 639 aa12.52□□□□□ -0.41
TRAPPC4-211ENST00000533012 RAG1P15918 1043 aa12.52□□□□□ -0.41
TRAPPC4-211ENST00000533012 CMA1P23946 247 aa12.52□□□□□ -0.41
TRAPPC4-211ENST00000533012 THPOP40225 353 aa12.52□□□□□ -0.41
TRAPPC4-211ENST00000533012 POLGP54098 1239 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC4-211ENST00000533012 TMEM119Q4V9L6 283 aa12.52□□□□□ -0.41
TRAPPC4-211ENST00000533012 RUFY4Q6ZNE9 571 aa12.52□□□□□ -0.41
TRAPPC4-211ENST00000533012 CCDC73Q6ZRK6 1079 aa12.52□□□□□ -0.41
TRAPPC4-211ENST00000533012 SH3RF1Q7Z6J0 888 aa12.52□□□□□ -0.41
TRAPPC4-211ENST00000533012 RPAINQ86UA6 219 aa12.52□□□□□ -0.41
TRAPPC4-211ENST00000533012 DNAJB3Q8WWF6 145 aa12.52□□□□□ -0.41
TRAPPC4-211ENST00000533012 ZBTB10Q96DT7 871 aa12.52□□□□□ -0.41
TRAPPC4-211ENST00000533012 CTAGE1Q96RT6 745 aa12.52□□□□□ -0.41
TRAPPC4-211ENST00000533012 CEP89Q96ST8 783 aa12.52□□□□□ -0.41
TRAPPC4-211ENST00000533012 FAM49AQ9H0Q0 323 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC4-211ENST00000533012 BHMT2Q9H2M3 363 aa12.52□□□□□ -0.41
TRAPPC4-211ENST00000533012 HIPK3Q9H422 1215 aa12.52□□□□□ -0.41
TRAPPC4-211ENST00000533012 DHX33Q9H6R0 707 aaKnown RBP12.52□□□□□ -0.41
TRAPPC4-211ENST00000533012 TBX21Q9UL17 535 aa12.52□□□□□ -0.41
TRAPPC4-211ENST00000533012 SCN10AQ9Y5Y9 1956 aa12.52□□□□□ -0.41
TRAPPC4-211ENST00000533012 IGKV6-21A0A0C4DH24 114 aa12.51□□□□□ -0.41
TRAPPC4-211ENST00000533012 TRIM43BA6NCK2 446 aa12.51□□□□□ -0.41
TRAPPC4-211ENST00000533012 PITPNM1O00562 1244 aa12.51□□□□□ -0.41
TRAPPC4-211ENST00000533012 CAND2O75155 1236 aa12.51□□□□□ -0.41
TRAPPC4-211ENST00000533012 TIMP1P01033 207 aa12.51□□□□□ -0.41
TRAPPC4-211ENST00000533012 SSBP05455 408 aaKnown RBP eCLIP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms