RNA–Protein interactions for RNA: ENST00000532884.1

PUF60-220, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 5

Gene PUF60, Length 819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-220ENST00000532884 ZBED2Q9BTP6 218 aa16.26■□□□□ 0.19
PUF60-220ENST00000532884 IFIH1Q9BYX4 1025 aaKnown RBP16.26■□□□□ 0.19
PUF60-220ENST00000532884 FOXP1Q9H334 677 aaPredicted RBP16.26■□□□□ 0.19
PUF60-220ENST00000532884 SEPT9Q9UHD8 586 aaPredicted RBP16.26■□□□□ 0.19
PUF60-220ENST00000532884 PCDHA12Q9UN75 941 aa16.26■□□□□ 0.19
PUF60-220ENST00000532884 SMC3Q9UQE7 1217 aa16.26■□□□□ 0.19
PUF60-220ENST00000532884 YBX2Q9Y2T7 364 aaKnown RBP16.26■□□□□ 0.19
PUF60-220ENST00000532884 KIF28PB7ZC32 967 aa16.25■□□□□ 0.19
PUF60-220ENST00000532884 C22orf31O95567 290 aa16.25■□□□□ 0.19
PUF60-220ENST00000532884 MGAT3Q09327 533 aa16.25■□□□□ 0.19
PUF60-220ENST00000532884 LPIN1Q14693 890 aa16.25■□□□□ 0.19
PUF60-220ENST00000532884 MTERF2Q49AM1 385 aa16.25■□□□□ 0.19
PUF60-220ENST00000532884 NOSTRINQ8IVI9 506 aa16.25■□□□□ 0.19
PUF60-220ENST00000532884 HERC6Q8IVU3 1022 aa16.25■□□□□ 0.19
PUF60-220ENST00000532884 KIAA0319LQ8IZA0 1049 aa16.25■□□□□ 0.19
PUF60-220ENST00000532884 PHOSPHO2Q8TCD6 241 aa16.25■□□□□ 0.19
PUF60-220ENST00000532884 SLC9A7Q96T83 725 aa16.25■□□□□ 0.19
PUF60-220ENST00000532884 ZNF576Q9H609 170 aa16.25■□□□□ 0.19
PUF60-220ENST00000532884 TTC12Q9H892 705 aaPredicted RBP16.25■□□□□ 0.19
PUF60-220ENST00000532884 SUGCTQ9HAC7 445 aa16.25■□□□□ 0.19
PUF60-220ENST00000532884 SLC28A3Q9HAS3 691 aa16.25■□□□□ 0.19
PUF60-220ENST00000532884 RGL1Q9NZL6 768 aa16.25■□□□□ 0.19
PUF60-220ENST00000532884 CEP131Q9UPN4 1083 aa16.25■□□□□ 0.19
PUF60-220ENST00000532884 TRPV2Q9Y5S1 764 aa16.25■□□□□ 0.19
PUF60-220ENST00000532884 H3BQV1 296 aa16.24■□□□□ 0.19
PUF60-220ENST00000532884 RPLP2P05387 115 aaKnown RBP16.24■□□□□ 0.19
PUF60-220ENST00000532884 CLCN3P51790 818 aa16.24■□□□□ 0.19
PUF60-220ENST00000532884 PSMC5P62195 406 aa16.24■□□□□ 0.19
PUF60-220ENST00000532884 XKR3Q5GH77 459 aa16.24■□□□□ 0.19
PUF60-220ENST00000532884 FBXO47Q5MNV8 452 aa16.24■□□□□ 0.19
PUF60-220ENST00000532884 EFCAB12Q6NXP0 572 aa16.24■□□□□ 0.19
PUF60-220ENST00000532884 MYOCDQ8IZQ8 938 aa16.24■□□□□ 0.19
PUF60-220ENST00000532884 NME8Q8N427 588 aa16.24■□□□□ 0.19
PUF60-220ENST00000532884 LRRC71Q8N4P6 559 aa16.24■□□□□ 0.19
PUF60-220ENST00000532884 CELF4Q9BZC1 486 aaKnown RBP16.24■□□□□ 0.19
PUF60-220ENST00000532884 TMEM60Q9H2L4 133 aa16.24■□□□□ 0.19
PUF60-220ENST00000532884 AGO3Q9H9G7 860 aaKnown RBP16.24■□□□□ 0.19
PUF60-220ENST00000532884 CDHR5Q9HBB8 845 aa16.24■□□□□ 0.19
PUF60-220ENST00000532884 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.24■□□□□ 0.19
PUF60-220ENST00000532884 PCDHA11Q9Y5I1 949 aa16.24■□□□□ 0.19
PUF60-220ENST00000532884 MAGEB2O15479 319 aa16.23■□□□□ 0.19
PUF60-220ENST00000532884 TLL1O43897 1013 aa16.23■□□□□ 0.19
PUF60-220ENST00000532884 EFCAB14O75071 495 aa16.23■□□□□ 0.19
PUF60-220ENST00000532884 UPP2O95045 317 aa16.23■□□□□ 0.19
PUF60-220ENST00000532884 AMHP03971 560 aa16.23■□□□□ 0.19
PUF60-220ENST00000532884 VTNP04004 478 aa16.23■□□□□ 0.19
PUF60-220ENST00000532884 P4HBP07237 508 aaKnown RBP16.23■□□□□ 0.19
PUF60-220ENST00000532884 CD52P31358 61 aa16.23■□□□□ 0.19
PUF60-220ENST00000532884 QARSP47897 775 aaKnown RBP16.23■□□□□ 0.19
PUF60-220ENST00000532884 CYP4A11Q02928 519 aa16.23■□□□□ 0.19
PUF60-220ENST00000532884 TBC1D8BQ0IIM8 1120 aa16.23■□□□□ 0.19
PUF60-220ENST00000532884 CTTNQ14247 550 aaKnown RBP16.23■□□□□ 0.19
PUF60-220ENST00000532884 NBR1Q14596 966 aa16.23■□□□□ 0.19
PUF60-220ENST00000532884 GRIN2CQ14957 1233 aa16.23■□□□□ 0.19
PUF60-220ENST00000532884 EPHA7Q15375 998 aa16.23■□□□□ 0.19
PUF60-220ENST00000532884 KIZQ2M2Z5 673 aa16.23■□□□□ 0.19
PUF60-220ENST00000532884 TTC38Q5R3I4 469 aa16.23■□□□□ 0.19
PUF60-220ENST00000532884 PLA2G4FQ68DD2 849 aa16.23■□□□□ 0.19
PUF60-220ENST00000532884 TPH2Q8IWU9 490 aa16.23■□□□□ 0.19
PUF60-220ENST00000532884 DYDC2Q96IM9 177 aa16.23■□□□□ 0.19
PUF60-220ENST00000532884 ZNF668Q96K58 619 aaPredicted RBP16.23■□□□□ 0.19
PUF60-220ENST00000532884 GUCD1Q96NT3 240 aa16.23■□□□□ 0.19
PUF60-220ENST00000532884 CDX2Q99626 313 aaPredicted RBP16.23■□□□□ 0.19
PUF60-220ENST00000532884 NOL7Q9UMY1 257 aaKnown RBP16.23■□□□□ 0.19
PUF60-220ENST00000532884 AKT3Q9Y243 479 aa16.23■□□□□ 0.19
PUF60-220ENST00000532884 STBD1O95210 358 aa16.22■□□□□ 0.19
PUF60-220ENST00000532884 CA3P07451 260 aa16.22■□□□□ 0.19
PUF60-220ENST00000532884 IBSPP21815 317 aaPredicted RBP16.22■□□□□ 0.19
PUF60-220ENST00000532884 TMOD1P28289 359 aa16.22■□□□□ 0.19
PUF60-220ENST00000532884 SPIRE1Q08AE8 756 aa16.22■□□□□ 0.19
PUF60-220ENST00000532884 TMEM266Q2M3C6 531 aa16.22■□□□□ 0.19
PUF60-220ENST00000532884 PPP2R2DQ66LE6 453 aa16.22■□□□□ 0.19
PUF60-220ENST00000532884 TSHZ1Q6ZSZ6 1077 aa16.22■□□□□ 0.19
PUF60-220ENST00000532884 ANO5Q75V66 913 aa16.22■□□□□ 0.19
PUF60-220ENST00000532884 MYLIPQ8WY64 445 aa16.22■□□□□ 0.19
PUF60-220ENST00000532884 MTMR9Q96QG7 549 aa16.22■□□□□ 0.19
PUF60-220ENST00000532884 LXNQ9BS40 222 aa16.22■□□□□ 0.19
PUF60-220ENST00000532884 CERS4Q9HA82 394 aa16.22■□□□□ 0.19
PUF60-220ENST00000532884 WRAP73Q9P2S5 460 aaPredicted RBP16.22■□□□□ 0.19
PUF60-220ENST00000532884 MYH9P35579 1960 aaKnown RBP16.21■□□□□ 0.19
PUF60-220ENST00000532884 U2AF2P26368 475 aaKnown RBP eCLIP16.21■□□□□ 0.19
PUF60-220ENST00000532884 NPEPPSP55786 919 aa16.21■□□□□ 0.19
PUF60-220ENST00000532884 NFX1Q12986 1120 aaKnown RBP16.21■□□□□ 0.19
PUF60-220ENST00000532884 LARP1BQ659C4 914 aaKnown RBP16.21■□□□□ 0.19
PUF60-220ENST00000532884 APBB2Q92870 758 aa16.21■□□□□ 0.19
PUF60-220ENST00000532884 MAP7D2Q96T17 732 aa16.21■□□□□ 0.19
PUF60-220ENST00000532884 OSMRQ99650 979 aa16.21■□□□□ 0.19
PUF60-220ENST00000532884 EIF2AK1Q9BQI3 630 aaKnown RBP16.21■□□□□ 0.19
PUF60-220ENST00000532884 NIFKQ9BYG3 293 aaKnown RBP16.21■□□□□ 0.19
PUF60-220ENST00000532884 PRDM12Q9H4Q4 367 aa16.21■□□□□ 0.19
PUF60-220ENST00000532884 FOXD4L1Q9NU39 408 aa16.21■□□□□ 0.19
PUF60-220ENST00000532884 CHD9Q3L8U1 2897 aa16.2■□□□□ 0.18
PUF60-220ENST00000532884 TMEM265A0A087WTH1 108 aa16.2■□□□□ 0.18
PUF60-220ENST00000532884 A0A087WWV3 80 aa16.2■□□□□ 0.18
PUF60-220ENST00000532884 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.2■□□□□ 0.18
PUF60-220ENST00000532884 LCHNA4D1U4 455 aa16.2■□□□□ 0.18
PUF60-220ENST00000532884 POTEMA6NI47 508 aa16.2■□□□□ 0.18
PUF60-220ENST00000532884 ZBTB39O15060 712 aa16.2■□□□□ 0.18
PUF60-220ENST00000532884 DKC1O60832 514 aaKnown RBP eCLIP16.2■□□□□ 0.18
PUF60-220ENST00000532884 TECP42680 631 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms