RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 MMRN1Q13201 1228 aa14.02□□□□□ -0.17
COPB1-208ENST00000532088 MTFR1Q15390 333 aa14.02□□□□□ -0.17
COPB1-208ENST00000532088 RESP18Q5W5W9 173 aa14.02□□□□□ -0.17
COPB1-208ENST00000532088 EIF2AK1Q9BQI3 630 aaKnown RBP14.02□□□□□ -0.17
COPB1-208ENST00000532088 KATNAL1Q9BW62 490 aa14.02□□□□□ -0.17
COPB1-208ENST00000532088 NT5C3AQ9H0P0 336 aa14.02□□□□□ -0.17
COPB1-208ENST00000532088 RNF208Q9H0X6 261 aa14.02□□□□□ -0.17
COPB1-208ENST00000532088 SMARCAD1Q9H4L7 1026 aa14.02□□□□□ -0.17
COPB1-208ENST00000532088 AZI2Q9H6S1 392 aa14.02□□□□□ -0.17
COPB1-208ENST00000532088 FAM13BQ9NYF5 915 aa14.02□□□□□ -0.17
COPB1-208ENST00000532088 SAMM50Q9Y512 469 aa14.02□□□□□ -0.17
COPB1-208ENST00000532088 MAFBQ9Y5Q3 323 aaPredicted RBP14.02□□□□□ -0.17
COPB1-208ENST00000532088 CABYRO75952 493 aa14.01□□□□□ -0.17
COPB1-208ENST00000532088 F2P00734 622 aa14.01□□□□□ -0.17
COPB1-208ENST00000532088 C6orf222P0C671 652 aaPredicted RBP14.01□□□□□ -0.17
COPB1-208ENST00000532088 XRCC6P12956 609 aaKnown RBP eCLIP14.01□□□□□ -0.17
COPB1-208ENST00000532088 UBA7P41226 1012 aa14.01□□□□□ -0.17
COPB1-208ENST00000532088 STAT5BP51692 787 aa14.01□□□□□ -0.17
COPB1-208ENST00000532088 PSMC5P62195 406 aa14.01□□□□□ -0.17
COPB1-208ENST00000532088 CCSAPQ6IQ19 270 aaPredicted RBP14.01□□□□□ -0.17
COPB1-208ENST00000532088 SHC4Q6S5L8 630 aa14.01□□□□□ -0.17
COPB1-208ENST00000532088 NYAP1Q6ZVC0 841 aa14.01□□□□□ -0.17
COPB1-208ENST00000532088 CABP7Q86V35 215 aa14.01□□□□□ -0.17
COPB1-208ENST00000532088 C4orf19Q8IY42 314 aa14.01□□□□□ -0.17
COPB1-208ENST00000532088 SNX29Q8TEQ0 813 aa14.01□□□□□ -0.17
COPB1-208ENST00000532088 LENG1Q96BZ8 264 aaPredicted RBP14.01□□□□□ -0.17
COPB1-208ENST00000532088 FAM167AQ96KS9 214 aa14.01□□□□□ -0.17
COPB1-208ENST00000532088 CLIC6Q96NY7 704 aa14.01□□□□□ -0.17
COPB1-208ENST00000532088 UIMC1Q96RL1 719 aa14.01□□□□□ -0.17
COPB1-208ENST00000532088 MMTAG2Q9BU76 263 aaKnown RBP14.01□□□□□ -0.17
COPB1-208ENST00000532088 ZSWIM4Q9H7M6 989 aa14.01□□□□□ -0.17
COPB1-208ENST00000532088 GDPD2Q9HCC8 539 aa14.01□□□□□ -0.17
COPB1-208ENST00000532088 ZNF302Q9NR11 478 aa14.01□□□□□ -0.17
COPB1-208ENST00000532088 ZNF215Q9UL58 517 aaPredicted RBP14.01□□□□□ -0.17
COPB1-208ENST00000532088 DOCK5Q9H7D0 1870 aa14.01□□□□□ -0.17
COPB1-208ENST00000532088 HTTP42858 3142 aa14□□□□□ -0.17
COPB1-208ENST00000532088 GOLGA6L4A6NEF3 574 aa14□□□□□ -0.17
COPB1-208ENST00000532088 DNM1LO00429 736 aa14□□□□□ -0.17
COPB1-208ENST00000532088 SLITRK3O94933 977 aa14□□□□□ -0.17
COPB1-208ENST00000532088 SGPL1O95470 568 aa14□□□□□ -0.17
COPB1-208ENST00000532088 PGK1P00558 417 aa14□□□□□ -0.17
COPB1-208ENST00000532088 LGALS2P05162 132 aa14□□□□□ -0.17
COPB1-208ENST00000532088 SPATA31C1P0DKV0 1188 aa14□□□□□ -0.17
COPB1-208ENST00000532088 GJA8P48165 433 aa14□□□□□ -0.17
COPB1-208ENST00000532088 UBE2HP62256 183 aa14□□□□□ -0.17
COPB1-208ENST00000532088 SP4Q02446 784 aa14□□□□□ -0.17
COPB1-208ENST00000532088 LRRC41Q15345 812 aa14□□□□□ -0.17
COPB1-208ENST00000532088 KMT5BQ4FZB7 885 aa14□□□□□ -0.17
COPB1-208ENST00000532088 GNASQ5JWF2 1037 aa14□□□□□ -0.17
COPB1-208ENST00000532088 CATSPER3Q86XQ3 398 aa14□□□□□ -0.17
COPB1-208ENST00000532088 CCDC60Q8IWA6 550 aaPredicted RBP14□□□□□ -0.17
COPB1-208ENST00000532088 ANKLE1Q8NAG6 615 aa14□□□□□ -0.17
COPB1-208ENST00000532088 SYMPKQ92797 1274 aaKnown RBP14□□□□□ -0.17
COPB1-208ENST00000532088 CALML4Q96GE6 196 aa14□□□□□ -0.17
COPB1-208ENST00000532088 DEFB118Q96PH6 123 aa14□□□□□ -0.17
COPB1-208ENST00000532088 PCYT2Q99447 389 aa14□□□□□ -0.17
COPB1-208ENST00000532088 C16orf70Q9BSU1 422 aa14□□□□□ -0.17
COPB1-208ENST00000532088 PRR14Q9BWN1 585 aa14□□□□□ -0.17
COPB1-208ENST00000532088 SEZ6LQ9BYH1 1024 aa14□□□□□ -0.17
COPB1-208ENST00000532088 ERAP1Q9NZ08 941 aa14□□□□□ -0.17
COPB1-208ENST00000532088 GABBR1Q9UBS5 961 aa14□□□□□ -0.17
COPB1-208ENST00000532088 CCDC39Q9UFE4 941 aa14□□□□□ -0.17
COPB1-208ENST00000532088 HPSEQ9Y251 543 aa14□□□□□ -0.17
COPB1-208ENST00000532088 PPME1Q9Y570 386 aa14□□□□□ -0.17
COPB1-208ENST00000532088 BACH1O14867 736 aa13.99□□□□□ -0.17
COPB1-208ENST00000532088 ACTN4O43707 911 aaKnown RBP13.99□□□□□ -0.17
COPB1-208ENST00000532088 PTMSP20962 102 aa13.99□□□□□ -0.17
COPB1-208ENST00000532088 PTGS1P23219 599 aa13.99□□□□□ -0.17
COPB1-208ENST00000532088 CCT6AP40227 531 aaKnown RBP13.99□□□□□ -0.17
COPB1-208ENST00000532088 PTPN5P54829 565 aa13.99□□□□□ -0.17
COPB1-208ENST00000532088 PURAQ00577 322 aaKnown RBP13.99□□□□□ -0.17
COPB1-208ENST00000532088 TMEM119Q4V9L6 283 aa13.99□□□□□ -0.17
COPB1-208ENST00000532088 XKR3Q5GH77 459 aa13.99□□□□□ -0.17
COPB1-208ENST00000532088 SWSAP1Q6NVH7 229 aa13.99□□□□□ -0.17
COPB1-208ENST00000532088 PDXDC2PQ6P474 469 aa13.99□□□□□ -0.17
COPB1-208ENST00000532088 CCDC73Q6ZRK6 1079 aa13.99□□□□□ -0.17
COPB1-208ENST00000532088 U2AF1L4Q8WU68 220 aaKnown RBP13.99□□□□□ -0.17
COPB1-208ENST00000532088 SPIRE2Q8WWL2 714 aa13.99□□□□□ -0.17
COPB1-208ENST00000532088 MRPS27Q92552 414 aaKnown RBP13.99□□□□□ -0.17
COPB1-208ENST00000532088 DYDC2Q96IM9 177 aa13.99□□□□□ -0.17
COPB1-208ENST00000532088 LXNQ9BS40 222 aa13.99□□□□□ -0.17
COPB1-208ENST00000532088 MTG1Q9BT17 334 aaPredicted RBP13.99□□□□□ -0.17
COPB1-208ENST00000532088 USP25Q9UHP3 1055 aa13.99□□□□□ -0.17
COPB1-208ENST00000532088 TELO2Q9Y4R8 837 aa13.99□□□□□ -0.17
COPB1-208ENST00000532088 MYADML2A6NDP7 307 aa13.98□□□□□ -0.17
COPB1-208ENST00000532088 PP2D1A8MPX8 630 aa13.98□□□□□ -0.17
COPB1-208ENST00000532088 KBTBD13C9JR72 458 aa13.98□□□□□ -0.17
COPB1-208ENST00000532088 HAS3O00219 553 aa13.98□□□□□ -0.17
COPB1-208ENST00000532088 SORBS3O60504 671 aa13.98□□□□□ -0.17
COPB1-208ENST00000532088 MED24O75448 989 aa13.98□□□□□ -0.17
COPB1-208ENST00000532088 BEX3Q00994 111 aa13.98□□□□□ -0.17
COPB1-208ENST00000532088 KCNA10Q16322 511 aa13.98□□□□□ -0.17
COPB1-208ENST00000532088 ATP8B4Q8TF62 1192 aa13.98□□□□□ -0.17
COPB1-208ENST00000532088 GLG1Q92896 1179 aa13.98□□□□□ -0.17
COPB1-208ENST00000532088 EPSTI1Q96J88 318 aa13.98□□□□□ -0.17
COPB1-208ENST00000532088 CDK5RAP3Q96JB5 506 aa13.98□□□□□ -0.17
COPB1-208ENST00000532088 NACC1Q96RE7 527 aa13.98□□□□□ -0.17
COPB1-208ENST00000532088 CUEDC2Q9H467 287 aa13.98□□□□□ -0.17
COPB1-208ENST00000532088 ANKEF1Q9NU02 776 aa13.98□□□□□ -0.17
COPB1-208ENST00000532088 RGL1Q9NZL6 768 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms