RNA–Protein interactions for RNA: ENST00000532066.1

TRIM44-202, Transcript of tripartite motif containing 44, humanhuman

TSL 4

Gene TRIM44, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM44-202ENST00000532066 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.72□□□□□ -1.01
TRIM44-202ENST00000532066 SCFD1Q8WVM8 642 aa8.72□□□□□ -1.01
TRIM44-202ENST00000532066 HPS3Q969F9 1004 aa8.72□□□□□ -1.01
TRIM44-202ENST00000532066 ZKSCAN4Q969J2 545 aaPredicted RBP8.72□□□□□ -1.01
TRIM44-202ENST00000532066 ATG4CQ96DT6 458 aa8.72□□□□□ -1.01
TRIM44-202ENST00000532066 CCDC43Q96MW1 224 aaKnown RBP8.72□□□□□ -1.01
TRIM44-202ENST00000532066 IWS1Q96ST2 819 aa8.72□□□□□ -1.01
TRIM44-202ENST00000532066 PDCD2LQ9BRP1 358 aa8.72□□□□□ -1.01
TRIM44-202ENST00000532066 UNC45AQ9H3U1 944 aa8.72□□□□□ -1.01
TRIM44-202ENST00000532066 ACAD9Q9H845 621 aa8.72□□□□□ -1.01
TRIM44-202ENST00000532066 MRPL44Q9H9J2 332 aaKnown RBP8.72□□□□□ -1.01
TRIM44-202ENST00000532066 PARVGQ9HBI0 331 aa8.72□□□□□ -1.01
TRIM44-202ENST00000532066 PXMP2Q9NR77 195 aa8.72□□□□□ -1.01
TRIM44-202ENST00000532066 TYW1Q9NV66 732 aaKnown RBP8.72□□□□□ -1.01
TRIM44-202ENST00000532066 CGNQ9P2M7 1197 aaKnown RBP8.72□□□□□ -1.01
TRIM44-202ENST00000532066 KCNG1Q9UIX4 513 aa8.72□□□□□ -1.01
TRIM44-202ENST00000532066 AFG3L2Q9Y4W6 797 aa8.72□□□□□ -1.01
TRIM44-202ENST00000532066 ADGRG1Q9Y653 693 aa8.72□□□□□ -1.01
TRIM44-202ENST00000532066 ZC3H4Q9UPT8 1303 aaKnown RBP8.72□□□□□ -1.01
TRIM44-202ENST00000532066 TTC26A0AVF1 554 aa8.71□□□□□ -1.02
TRIM44-202ENST00000532066 WDR64B1ANS9 1081 aa8.71□□□□□ -1.02
TRIM44-202ENST00000532066 CXCL11O14625 94 aa8.71□□□□□ -1.02
TRIM44-202ENST00000532066 CTIFO43310 598 aaKnown RBP8.71□□□□□ -1.02
TRIM44-202ENST00000532066 CHMP2AO43633 222 aa8.71□□□□□ -1.02
TRIM44-202ENST00000532066 USP2O75604 605 aaPredicted RBP8.71□□□□□ -1.02
TRIM44-202ENST00000532066 TAL1P17542 331 aaPredicted RBP8.71□□□□□ -1.02
TRIM44-202ENST00000532066 ITGB5P18084 799 aa8.71□□□□□ -1.02
TRIM44-202ENST00000532066 CASQ1P31415 396 aa8.71□□□□□ -1.02
TRIM44-202ENST00000532066 HNRNPH3P31942 346 aaKnown RBP8.71□□□□□ -1.02
TRIM44-202ENST00000532066 ABCD1P33897 745 aa8.71□□□□□ -1.02
TRIM44-202ENST00000532066 QARSP47897 775 aaKnown RBP8.71□□□□□ -1.02
TRIM44-202ENST00000532066 ZNF131P52739 623 aa8.71□□□□□ -1.02
TRIM44-202ENST00000532066 HIRAP54198 1017 aaPredicted RBP8.71□□□□□ -1.02
TRIM44-202ENST00000532066 SNRPFP62306 86 aaKnown RBP8.71□□□□□ -1.02
TRIM44-202ENST00000532066 PSMC6P62333 389 aa8.71□□□□□ -1.02
TRIM44-202ENST00000532066 TUBB4BP68371 445 aa8.71□□□□□ -1.02
TRIM44-202ENST00000532066 UBXN2AP68543 259 aa8.71□□□□□ -1.02
TRIM44-202ENST00000532066 ADAM9Q13443 819 aa8.71□□□□□ -1.02
TRIM44-202ENST00000532066 CTTNQ14247 550 aaKnown RBP8.71□□□□□ -1.02
TRIM44-202ENST00000532066 MEA1Q16626 185 aa8.71□□□□□ -1.02
TRIM44-202ENST00000532066 GNPTABQ3T906 1256 aa8.71□□□□□ -1.02
TRIM44-202ENST00000532066 ARHGAP29Q52LW3 1261 aa8.71□□□□□ -1.02
TRIM44-202ENST00000532066 MUM1L1Q5H9M0 696 aa8.71□□□□□ -1.02
TRIM44-202ENST00000532066 MIIPQ5JXC2 388 aa8.71□□□□□ -1.02
TRIM44-202ENST00000532066 SNRNP48Q6IEG0 339 aaKnown RBP8.71□□□□□ -1.02
TRIM44-202ENST00000532066 ZNF746Q6NUN9 644 aaPredicted RBP8.71□□□□□ -1.02
TRIM44-202ENST00000532066 C1orf186Q6ZWK4 172 aa8.71□□□□□ -1.02
TRIM44-202ENST00000532066 USP50Q70EL3 339 aaPredicted RBP8.71□□□□□ -1.02
TRIM44-202ENST00000532066 OTUD6AQ7L8S5 288 aa8.71□□□□□ -1.02
TRIM44-202ENST00000532066 HS2ST1Q7LGA3 356 aa8.71□□□□□ -1.02
TRIM44-202ENST00000532066 VSIG10LQ86VR7 867 aa8.71□□□□□ -1.02
TRIM44-202ENST00000532066 SFR1Q86XK3 245 aa8.71□□□□□ -1.02
TRIM44-202ENST00000532066 MYCT1Q8N699 235 aa8.71□□□□□ -1.02
TRIM44-202ENST00000532066 EHBP1Q8NDI1 1231 aa8.71□□□□□ -1.02
TRIM44-202ENST00000532066 REPS2Q8NFH8 660 aa8.71□□□□□ -1.02
TRIM44-202ENST00000532066 NEK11Q8NG66 645 aa8.71□□□□□ -1.02
TRIM44-202ENST00000532066 SYN2Q92777 582 aaPredicted RBP8.71□□□□□ -1.02
TRIM44-202ENST00000532066 TAAR1Q96RJ0 339 aa8.71□□□□□ -1.02
TRIM44-202ENST00000532066 MPHOSPH6Q99547 160 aaKnown RBP8.71□□□□□ -1.02
TRIM44-202ENST00000532066 SENP7Q9BQF6 1050 aa8.71□□□□□ -1.02
TRIM44-202ENST00000532066 LXNQ9BS40 222 aa8.71□□□□□ -1.02
TRIM44-202ENST00000532066 FHDC1Q9C0D6 1143 aaPredicted RBP8.71□□□□□ -1.02
TRIM44-202ENST00000532066 KCTD10Q9H3F6 313 aa8.71□□□□□ -1.02
TRIM44-202ENST00000532066 HOMER2Q9NSB8 354 aa8.71□□□□□ -1.02
TRIM44-202ENST00000532066 ANKEF1Q9NU02 776 aa8.71□□□□□ -1.02
TRIM44-202ENST00000532066 RGL1Q9NZL6 768 aa8.71□□□□□ -1.02
TRIM44-202ENST00000532066 RNF181Q9P0P0 153 aa8.71□□□□□ -1.02
TRIM44-202ENST00000532066 COL20A1Q9P218 1284 aa8.71□□□□□ -1.02
TRIM44-202ENST00000532066 LARSQ9P2J5 1176 aaKnown RBP8.71□□□□□ -1.02
TRIM44-202ENST00000532066 DAAM1Q9Y4D1 1078 aa8.71□□□□□ -1.02
TRIM44-202ENST00000532066 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.71□□□□□ -1.02
TRIM44-202ENST00000532066 EPN1Q9Y6I3 576 aaPredicted RBP8.71□□□□□ -1.02
TRIM44-202ENST00000532066 DOCK1Q14185 1865 aa8.7□□□□□ -1.02
TRIM44-202ENST00000532066 NPHP3-ACAD11A0A0J9YXS1 232 aa8.7□□□□□ -1.02
TRIM44-202ENST00000532066 UNCXA6NJT0 531 aa8.7□□□□□ -1.02
TRIM44-202ENST00000532066 DHX15O43143 795 aaKnown RBP8.7□□□□□ -1.02
TRIM44-202ENST00000532066 SLU7O95391 586 aaKnown RBP8.7□□□□□ -1.02
TRIM44-202ENST00000532066 GCNT3O95395 438 aa8.7□□□□□ -1.02
TRIM44-202ENST00000532066 NR3C2P08235 984 aa8.7□□□□□ -1.02
TRIM44-202ENST00000532066 EPB41P11171 864 aaKnown RBP8.7□□□□□ -1.02
TRIM44-202ENST00000532066 MYCLP12524 364 aaPredicted RBP8.7□□□□□ -1.02
TRIM44-202ENST00000532066 EIF2AK2P19525 551 aaKnown RBP8.7□□□□□ -1.02
TRIM44-202ENST00000532066 SCP2P22307 547 aa8.7□□□□□ -1.02
TRIM44-202ENST00000532066 GNG11P61952 73 aa8.7□□□□□ -1.02
TRIM44-202ENST00000532066 PSMC5P62195 406 aa8.7□□□□□ -1.02
TRIM44-202ENST00000532066 MRPS9P82933 396 aaKnown RBP8.7□□□□□ -1.02
TRIM44-202ENST00000532066 PPATQ06203 517 aa8.7□□□□□ -1.02
TRIM44-202ENST00000532066 GOLGA8FQ08AF8 430 aa8.7□□□□□ -1.02
TRIM44-202ENST00000532066 GOLGA8DPQ0D2H9 430 aa8.7□□□□□ -1.02
TRIM44-202ENST00000532066 BAATQ14032 418 aaPredicted RBP8.7□□□□□ -1.02
TRIM44-202ENST00000532066 HSP90AA2PQ14568 343 aaPredicted RBP8.7□□□□□ -1.02
TRIM44-202ENST00000532066 PTPN21Q16825 1174 aa8.7□□□□□ -1.02
TRIM44-202ENST00000532066 SYT10Q6XYQ8 523 aa8.7□□□□□ -1.02
TRIM44-202ENST00000532066 ZNF662Q6ZS27 426 aa8.7□□□□□ -1.02
TRIM44-202ENST00000532066 TOGARAM2Q6ZUX3 1019 aa8.7□□□□□ -1.02
TRIM44-202ENST00000532066 ERO1BQ86YB8 467 aa8.7□□□□□ -1.02
TRIM44-202ENST00000532066 FMNL3Q8IVF7 1028 aa8.7□□□□□ -1.02
TRIM44-202ENST00000532066 TRIM59Q8IWR1 403 aa8.7□□□□□ -1.02
TRIM44-202ENST00000532066 NELFCDQ8IXH7 590 aa8.7□□□□□ -1.02
TRIM44-202ENST00000532066 FAM178BQ8IXR5 827 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms