RNA–Protein interactions for RNA: ENST00000530746.1

PPFIA1-216, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-216ENST00000530746 GHRP10912 638 aa16.8■□□□□ 0.28
PPFIA1-216ENST00000530746 DEFB103AP81534 67 aa16.8■□□□□ 0.28
PPFIA1-216ENST00000530746 SPIRE1Q08AE8 756 aa16.8■□□□□ 0.28
PPFIA1-216ENST00000530746 TMEM62Q0P6H9 643 aa16.8■□□□□ 0.28
PPFIA1-216ENST00000530746 MKRN4PQ13434 485 aaPredicted RBP16.8■□□□□ 0.28
PPFIA1-216ENST00000530746 GNL2Q13823 731 aaKnown RBP16.8■□□□□ 0.28
PPFIA1-216ENST00000530746 CALCRLQ16602 461 aa16.8■□□□□ 0.28
PPFIA1-216ENST00000530746 FBXO47Q5MNV8 452 aa16.8■□□□□ 0.28
PPFIA1-216ENST00000530746 NOSTRINQ8IVI9 506 aa16.8■□□□□ 0.28
PPFIA1-216ENST00000530746 KIAA0319LQ8IZA0 1049 aa16.8■□□□□ 0.28
PPFIA1-216ENST00000530746 BANK1Q8NDB2 785 aa16.8■□□□□ 0.28
PPFIA1-216ENST00000530746 APBB2Q92870 758 aa16.8■□□□□ 0.28
PPFIA1-216ENST00000530746 GUCD1Q96NT3 240 aa16.8■□□□□ 0.28
PPFIA1-216ENST00000530746 IFIH1Q9BYX4 1025 aaKnown RBP16.8■□□□□ 0.28
PPFIA1-216ENST00000530746 ZNF576Q9H609 170 aa16.8■□□□□ 0.28
PPFIA1-216ENST00000530746 YBX2Q9Y2T7 364 aaKnown RBP16.8■□□□□ 0.28
PPFIA1-216ENST00000530746 TRPV2Q9Y5S1 764 aa16.8■□□□□ 0.28
PPFIA1-216ENST00000530746 CHD7Q9P2D1 2997 aa16.8■□□□□ 0.28
PPFIA1-216ENST00000530746 KDM3AQ9Y4C1 1321 aa16.79■□□□□ 0.28
PPFIA1-216ENST00000530746 MAGEB2O15479 319 aa16.79■□□□□ 0.28
PPFIA1-216ENST00000530746 ATP2B1P20020 1258 aa16.79■□□□□ 0.28
PPFIA1-216ENST00000530746 PSMC5P62195 406 aa16.79■□□□□ 0.28
PPFIA1-216ENST00000530746 LPIN1Q14693 890 aa16.79■□□□□ 0.28
PPFIA1-216ENST00000530746 XKR3Q5GH77 459 aa16.79■□□□□ 0.28
PPFIA1-216ENST00000530746 NIFKQ9BYG3 293 aaKnown RBP16.79■□□□□ 0.28
PPFIA1-216ENST00000530746 CELF4Q9BZC1 486 aaKnown RBP16.79■□□□□ 0.28
PPFIA1-216ENST00000530746 NKX2-4Q9H2Z4 354 aa16.79■□□□□ 0.28
PPFIA1-216ENST00000530746 SLC28A3Q9HAS3 691 aa16.79■□□□□ 0.28
PPFIA1-216ENST00000530746 PCDHA12Q9UN75 941 aa16.79■□□□□ 0.28
PPFIA1-216ENST00000530746 SQORQ9Y6N5 450 aa16.79■□□□□ 0.28
PPFIA1-216ENST00000530746 KIF28PB7ZC32 967 aa16.78■□□□□ 0.28
PPFIA1-216ENST00000530746 DKC1O60832 514 aaKnown RBP eCLIP16.78■□□□□ 0.28
PPFIA1-216ENST00000530746 STBD1O95210 358 aa16.78■□□□□ 0.28
PPFIA1-216ENST00000530746 P4HBP07237 508 aaKnown RBP16.78■□□□□ 0.28
PPFIA1-216ENST00000530746 MYOGP15173 224 aa16.78■□□□□ 0.28
PPFIA1-216ENST00000530746 U2AF2P26368 475 aaKnown RBP eCLIP16.78■□□□□ 0.282e-13■■■■□ 21.7
PPFIA1-216ENST00000530746 GJB2P29033 226 aa16.78■□□□□ 0.28
PPFIA1-216ENST00000530746 MCM7P33993 719 aa16.78■□□□□ 0.28
PPFIA1-216ENST00000530746 QARSP47897 775 aaKnown RBP16.78■□□□□ 0.28
PPFIA1-216ENST00000530746 EPHA7Q15375 998 aa16.78■□□□□ 0.28
PPFIA1-216ENST00000530746 TARBP2Q15633 366 aaKnown RBP16.78■□□□□ 0.28
PPFIA1-216ENST00000530746 NCAPH2Q6IBW4 605 aa16.78■□□□□ 0.28
PPFIA1-216ENST00000530746 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.78■□□□□ 0.282e-6■■■■□ 19.7
PPFIA1-216ENST00000530746 TSHZ1Q6ZSZ6 1077 aa16.78■□□□□ 0.28
PPFIA1-216ENST00000530746 METTL13Q8N6R0 699 aa16.78■□□□□ 0.28
PPFIA1-216ENST00000530746 USP38Q8NB14 1042 aa16.78■□□□□ 0.28
PPFIA1-216ENST00000530746 MTMR9Q96QG7 549 aa16.78■□□□□ 0.28
PPFIA1-216ENST00000530746 TTC12Q9H892 705 aaPredicted RBP16.78■□□□□ 0.28
PPFIA1-216ENST00000530746 SEPT9Q9UHD8 586 aaPredicted RBP16.78■□□□□ 0.28
PPFIA1-216ENST00000530746 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.78■□□□□ 0.28
PPFIA1-216ENST00000530746 ARID2Q68CP9 1835 aa16.77■□□□□ 0.28
PPFIA1-216ENST00000530746 GJB5O95377 273 aa16.77■□□□□ 0.28
PPFIA1-216ENST00000530746 AMHP03971 560 aa16.77■□□□□ 0.28
PPFIA1-216ENST00000530746 TMOD1P28289 359 aa16.77■□□□□ 0.28
PPFIA1-216ENST00000530746 TXKP42681 527 aa16.77■□□□□ 0.28
PPFIA1-216ENST00000530746 TRAPPC10P48553 1259 aa16.77■□□□□ 0.28
PPFIA1-216ENST00000530746 TBC1D8BQ0IIM8 1120 aa16.77■□□□□ 0.28
PPFIA1-216ENST00000530746 ORC2Q13416 577 aaPredicted RBP16.77■□□□□ 0.28
PPFIA1-216ENST00000530746 EFCAB12Q6NXP0 572 aa16.77■□□□□ 0.28
PPFIA1-216ENST00000530746 TMCO2Q7Z6W1 182 aaPredicted RBP16.77■□□□□ 0.28
PPFIA1-216ENST00000530746 LINC01465Q8N7H1 131 aa16.77■□□□□ 0.28
PPFIA1-216ENST00000530746 CDX2Q99626 313 aaPredicted RBP16.77■□□□□ 0.28
PPFIA1-216ENST00000530746 TMEM60Q9H2L4 133 aa16.77■□□□□ 0.28
PPFIA1-216ENST00000530746 AGO3Q9H9G7 860 aaKnown RBP16.77■□□□□ 0.28
PPFIA1-216ENST00000530746 SMC3Q9UQE7 1217 aa16.77■□□□□ 0.28
PPFIA1-216ENST00000530746 STXBP5LQ9Y2K9 1186 aa16.77■□□□□ 0.28
PPFIA1-216ENST00000530746 EYSQ5T1H1 3165 aa16.76■□□□□ 0.27
PPFIA1-216ENST00000530746 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.76■□□□□ 0.27
PPFIA1-216ENST00000530746 TMEM150BA6NC51 233 aa16.76■□□□□ 0.27
PPFIA1-216ENST00000530746 DDX11L8A8MPP1 907 aa16.76■□□□□ 0.27
PPFIA1-216ENST00000530746 TLL1O43897 1013 aa16.76■□□□□ 0.27
PPFIA1-216ENST00000530746 CA3P07451 260 aa16.76■□□□□ 0.27
PPFIA1-216ENST00000530746 CD52P31358 61 aa16.76■□□□□ 0.27
PPFIA1-216ENST00000530746 CLCN3P51790 818 aa16.76■□□□□ 0.27
PPFIA1-216ENST00000530746 GRIN2CQ14957 1233 aa16.76■□□□□ 0.27
PPFIA1-216ENST00000530746 MTERF2Q49AM1 385 aa16.76■□□□□ 0.27
PPFIA1-216ENST00000530746 TTC38Q5R3I4 469 aa16.76■□□□□ 0.27
PPFIA1-216ENST00000530746 PPP2R2DQ66LE6 453 aa16.76■□□□□ 0.27
PPFIA1-216ENST00000530746 ANO5Q75V66 913 aa16.76■□□□□ 0.27
PPFIA1-216ENST00000530746 CEP89Q96ST8 783 aa16.76■□□□□ 0.27
PPFIA1-216ENST00000530746 LXNQ9BS40 222 aa16.76■□□□□ 0.27
PPFIA1-216ENST00000530746 ZBED2Q9BTP6 218 aa16.76■□□□□ 0.27
PPFIA1-216ENST00000530746 WRAP73Q9P2S5 460 aaPredicted RBP16.76■□□□□ 0.27
PPFIA1-216ENST00000530746 NOL7Q9UMY1 257 aaKnown RBP16.76■□□□□ 0.27
PPFIA1-216ENST00000530746 GINS2Q9Y248 185 aa16.76■□□□□ 0.27
PPFIA1-216ENST00000530746 TTC3P53804 2025 aa16.75■□□□□ 0.27
PPFIA1-216ENST00000530746 VTNP04004 478 aa16.75■□□□□ 0.27
PPFIA1-216ENST00000530746 CUL4AQ13619 759 aa16.75■□□□□ 0.27
PPFIA1-216ENST00000530746 ZNF174Q15697 407 aa16.75■□□□□ 0.27
PPFIA1-216ENST00000530746 C4orf19Q8IY42 314 aa16.75■□□□□ 0.27
PPFIA1-216ENST00000530746 MYOCDQ8IZQ8 938 aa16.75■□□□□ 0.27
PPFIA1-216ENST00000530746 LRRC71Q8N4P6 559 aa16.75■□□□□ 0.27
PPFIA1-216ENST00000530746 DYDC2Q96IM9 177 aa16.75■□□□□ 0.27
PPFIA1-216ENST00000530746 MAP7D2Q96T17 732 aa16.75■□□□□ 0.27
PPFIA1-216ENST00000530746 SH2D3AQ9BRG2 576 aa16.75■□□□□ 0.27
PPFIA1-216ENST00000530746 ZSWIM4Q9H7M6 989 aa16.75■□□□□ 0.27
PPFIA1-216ENST00000530746 SUGCTQ9HAC7 445 aa16.75■□□□□ 0.27
PPFIA1-216ENST00000530746 CDHR5Q9HBB8 845 aa16.75■□□□□ 0.27
PPFIA1-216ENST00000530746 RGL1Q9NZL6 768 aa16.75■□□□□ 0.27
PPFIA1-216ENST00000530746 PADI3Q9ULW8 664 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms