RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 A6NJR5 290 aa11.86□□□□□ -0.51
SOX6-213ENST00000530378 GTPBP6O43824 516 aaPredicted RBP11.86□□□□□ -0.51
SOX6-213ENST00000530378 STBD1O95210 358 aa11.86□□□□□ -0.51
SOX6-213ENST00000530378 CPT1AP50416 773 aa11.86□□□□□ -0.51
SOX6-213ENST00000530378 SOX10P56693 466 aa11.86□□□□□ -0.51
SOX6-213ENST00000530378 MDM2Q00987 491 aaPredicted RBP11.86□□□□□ -0.51
SOX6-213ENST00000530378 GNASQ5JWF2 1037 aa11.86□□□□□ -0.51
SOX6-213ENST00000530378 SH3RF1Q7Z6J0 888 aa11.86□□□□□ -0.51
SOX6-213ENST00000530378 C4orf19Q8IY42 314 aa11.86□□□□□ -0.51
SOX6-213ENST00000530378 HPS3Q969F9 1004 aa11.86□□□□□ -0.51
SOX6-213ENST00000530378 CEP170P1Q96L14 293 aa11.86□□□□□ -0.51
SOX6-213ENST00000530378 C16orf70Q9BSU1 422 aa11.86□□□□□ -0.51
SOX6-213ENST00000530378 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.86□□□□□ -0.51
SOX6-213ENST00000530378 RNPEPQ9H4A4 650 aa11.86□□□□□ -0.51
SOX6-213ENST00000530378 ZHX3Q9H4I2 956 aa11.86□□□□□ -0.51
SOX6-213ENST00000530378 USP25Q9UHP3 1055 aa11.86□□□□□ -0.51
SOX6-213ENST00000530378 KIAA0100Q14667 2235 aaKnown RBP11.86□□□□□ -0.51
SOX6-213ENST00000530378 RSPH10B2B2RC85 870 aa11.86□□□□□ -0.51
SOX6-213ENST00000530378 RBAK-RBAKDNI3L0D1 243 aa11.86□□□□□ -0.51
SOX6-213ENST00000530378 ADAMTS4O75173 837 aa11.86□□□□□ -0.51
SOX6-213ENST00000530378 RSPH10BP0C881 870 aa11.86□□□□□ -0.51
SOX6-213ENST00000530378 IDEP14735 1019 aa11.86□□□□□ -0.51
SOX6-213ENST00000530378 CYP11B2P19099 503 aa11.86□□□□□ -0.51
SOX6-213ENST00000530378 RARRES1P49788 294 aa11.86□□□□□ -0.51
SOX6-213ENST00000530378 ARSHQ5FYA8 562 aa11.86□□□□□ -0.51
SOX6-213ENST00000530378 XKR3Q5GH77 459 aa11.86□□□□□ -0.51
SOX6-213ENST00000530378 PADI6Q6TGC4 694 aa11.86□□□□□ -0.51
SOX6-213ENST00000530378 CXCL17Q6UXB2 119 aa11.86□□□□□ -0.51
SOX6-213ENST00000530378 AFAP1L1Q8TED9 768 aa11.86□□□□□ -0.51
SOX6-213ENST00000530378 DDX12PQ92771 950 aa11.86□□□□□ -0.51
SOX6-213ENST00000530378 REEP2Q9BRK0 252 aa11.86□□□□□ -0.51
SOX6-213ENST00000530378 TRIM9Q9C026 710 aa11.86□□□□□ -0.51
SOX6-213ENST00000530378 CUEDC2Q9H467 287 aa11.86□□□□□ -0.51
SOX6-213ENST00000530378 SMARCAD1Q9H4L7 1026 aa11.86□□□□□ -0.51
SOX6-213ENST00000530378 PCDHA5Q9Y5H7 936 aa11.86□□□□□ -0.51
SOX6-213ENST00000530378 SFI1A8K8P3 1242 aa11.85□□□□□ -0.51
SOX6-213ENST00000530378 H3BRB1 525 aa11.85□□□□□ -0.51
SOX6-213ENST00000530378 SLC26A4O43511 780 aa11.85□□□□□ -0.51
SOX6-213ENST00000530378 PPFIA4O75335 1185 aa11.85□□□□□ -0.51
SOX6-213ENST00000530378 LYPLA2O95372 231 aa11.85□□□□□ -0.51
SOX6-213ENST00000530378 CCL5P13501 91 aa11.85□□□□□ -0.51
SOX6-213ENST00000530378 GJA9P57773 515 aa11.85□□□□□ -0.51
SOX6-213ENST00000530378 DPYDQ12882 1025 aa11.85□□□□□ -0.51
SOX6-213ENST00000530378 BRDTQ58F21 947 aaPredicted RBP11.85□□□□□ -0.51
SOX6-213ENST00000530378 RINT1Q6NUQ1 792 aa11.85□□□□□ -0.51
SOX6-213ENST00000530378 KANK3Q6NY19 840 aa11.85□□□□□ -0.51
SOX6-213ENST00000530378 SMYD4Q8IYR2 804 aaPredicted RBP11.85□□□□□ -0.51
SOX6-213ENST00000530378 SYT2Q8N9I0 419 aaPredicted RBP11.85□□□□□ -0.51
SOX6-213ENST00000530378 SMARCE1Q969G3 411 aa11.85□□□□□ -0.51
SOX6-213ENST00000530378 DEFB118Q96PH6 123 aa11.85□□□□□ -0.51
SOX6-213ENST00000530378 TUT1Q9H6E5 874 aaKnown RBP11.85□□□□□ -0.51
SOX6-213ENST00000530378 SPC25Q9HBM1 224 aa11.85□□□□□ -0.51
SOX6-213ENST00000530378 GPRC5CQ9NQ84 441 aa11.85□□□□□ -0.51
SOX6-213ENST00000530378 CYP26B1Q9NR63 512 aa11.85□□□□□ -0.51
SOX6-213ENST00000530378 ERAP1Q9NZ08 941 aa11.85□□□□□ -0.51
SOX6-213ENST00000530378 TBC1D7Q9P0N9 293 aa11.85□□□□□ -0.51
SOX6-213ENST00000530378 HOOK1Q9UJC3 728 aaKnown RBP11.85□□□□□ -0.51
SOX6-213ENST00000530378 ZNF215Q9UL58 517 aaPredicted RBP11.85□□□□□ -0.51
SOX6-213ENST00000530378 DKC1O60832 514 aaKnown RBP eCLIP11.84□□□□□ -0.51
SOX6-213ENST00000530378 HOXD8P13378 290 aaPredicted RBP11.84□□□□□ -0.51
SOX6-213ENST00000530378 KIAA0753Q2KHM9 967 aa11.84□□□□□ -0.51
SOX6-213ENST00000530378 ATP8B4Q8TF62 1192 aa11.84□□□□□ -0.51
SOX6-213ENST00000530378 KAT2BQ92831 832 aa11.84□□□□□ -0.51
SOX6-213ENST00000530378 CCDC34Q96HJ3 373 aa11.84□□□□□ -0.51
SOX6-213ENST00000530378 RNF208Q9H0X6 261 aa11.84□□□□□ -0.51
SOX6-213ENST00000530378 UPF3AQ9H1J1 476 aaKnown RBP11.84□□□□□ -0.51
SOX6-213ENST00000530378 MAGEF1Q9HAY2 307 aa11.84□□□□□ -0.51
SOX6-213ENST00000530378 KIAA1468Q9P260 1216 aa11.84□□□□□ -0.51
SOX6-213ENST00000530378 DBR1Q9UK59 544 aaKnown RBP11.84□□□□□ -0.51
SOX6-213ENST00000530378 SCN10AQ9Y5Y9 1956 aa11.84□□□□□ -0.51
SOX6-213ENST00000530378 SPDYE4A6NLX3 237 aa11.83□□□□□ -0.51
SOX6-213ENST00000530378 RPN1P04843 607 aaKnown RBP11.83□□□□□ -0.51
SOX6-213ENST00000530378 MUTP22033 750 aa11.83□□□□□ -0.51
SOX6-213ENST00000530378 POLGP54098 1239 aaPredicted RBP11.83□□□□□ -0.51
SOX6-213ENST00000530378 PURAQ00577 322 aaKnown RBP11.83□□□□□ -0.51
SOX6-213ENST00000530378 AMPD3Q01432 767 aa11.83□□□□□ -0.51
SOX6-213ENST00000530378 MFSD10Q14728 455 aa11.83□□□□□ -0.51
SOX6-213ENST00000530378 KCNA10Q16322 511 aa11.83□□□□□ -0.51
SOX6-213ENST00000530378 FAM102BQ5T8I3 360 aa11.83□□□□□ -0.51
SOX6-213ENST00000530378 LHX8Q68G74 356 aa11.83□□□□□ -0.51
SOX6-213ENST00000530378 FBXO46Q6PJ61 603 aaPredicted RBP11.83□□□□□ -0.51
SOX6-213ENST00000530378 C1orf186Q6ZWK4 172 aa11.83□□□□□ -0.51
SOX6-213ENST00000530378 OTUD6AQ7L8S5 288 aa11.83□□□□□ -0.51
SOX6-213ENST00000530378 PLPPR4Q7Z2D5 763 aa11.83□□□□□ -0.51
SOX6-213ENST00000530378 DNAJC19Q96DA6 116 aa11.83□□□□□ -0.51
SOX6-213ENST00000530378 FAM167AQ96KS9 214 aa11.83□□□□□ -0.51
SOX6-213ENST00000530378 ANKEF1Q9NU02 776 aa11.83□□□□□ -0.51
SOX6-213ENST00000530378 MAN1B1Q9UKM7 699 aa11.83□□□□□ -0.51
SOX6-213ENST00000530378 Q9Y3F1 56 aa11.83□□□□□ -0.51
SOX6-213ENST00000530378 MKI67P46013 3256 aaKnown RBP11.83□□□□□ -0.52
SOX6-213ENST00000530378 ZBTB42B2RXF5 422 aa11.83□□□□□ -0.52
SOX6-213ENST00000530378 KLRC4O43908 158 aa11.83□□□□□ -0.52
SOX6-213ENST00000530378 HIP1RO75146 1068 aa11.83□□□□□ -0.52
SOX6-213ENST00000530378 TBCAO75347 108 aaKnown RBP11.83□□□□□ -0.52
SOX6-213ENST00000530378 SMC2O95347 1197 aa11.83□□□□□ -0.52
SOX6-213ENST00000530378 F2P00734 622 aa11.83□□□□□ -0.52
SOX6-213ENST00000530378 ASGR1P07306 291 aa11.83□□□□□ -0.52
SOX6-213ENST00000530378 INSRRP14616 1297 aa11.83□□□□□ -0.52
SOX6-213ENST00000530378 PSEN2P49810 448 aa11.83□□□□□ -0.52
SOX6-213ENST00000530378 PPFIA1Q13136 1202 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms