RNA–Protein interactions for RNA: ENST00000530131.5

RDX-209, Transcript of radixin, humanhuman

TSL 2

Gene RDX, Length 1,911 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-209ENST00000530131 LRRC55Q6ZSA7 311 aa16.9■□□□□ 0.3
RDX-209ENST00000530131 VSTM4Q8IW00 320 aa16.9■□□□□ 0.3
RDX-209ENST00000530131 CTAGE1Q96RT6 745 aa16.9■□□□□ 0.3
RDX-209ENST00000530131 PCYT2Q99447 389 aa16.9■□□□□ 0.3
RDX-209ENST00000530131 SH2D3AQ9BRG2 576 aa16.9■□□□□ 0.3
RDX-209ENST00000530131 KATNBL1Q9H079 304 aa16.9■□□□□ 0.3
RDX-209ENST00000530131 USO1O60763 962 aaKnown RBP16.9■□□□□ 0.3
RDX-209ENST00000530131 KIF20AO95235 890 aa16.9■□□□□ 0.3
RDX-209ENST00000530131 ATP4AP20648 1035 aa16.9■□□□□ 0.3
RDX-209ENST00000530131 PTGS1P23219 599 aa16.9■□□□□ 0.3
RDX-209ENST00000530131 EEF1GP26641 437 aaKnown RBP16.9■□□□□ 0.3
RDX-209ENST00000530131 SREBF2Q12772 1141 aa16.9■□□□□ 0.3
RDX-209ENST00000530131 XKR9Q5GH70 373 aa16.9■□□□□ 0.3
RDX-209ENST00000530131 CELF3Q5SZQ8 465 aaKnown RBP16.9■□□□□ 0.3
RDX-209ENST00000530131 CCDC186Q7Z3E2 898 aa16.9■□□□□ 0.3
RDX-209ENST00000530131 MYCT1Q8N699 235 aa16.9■□□□□ 0.3
RDX-209ENST00000530131 ZIC5Q96T25 663 aa16.9■□□□□ 0.3
RDX-209ENST00000530131 TIPINQ9BVW5 301 aa16.9■□□□□ 0.3
RDX-209ENST00000530131 VTA1Q9NP79 307 aa16.9■□□□□ 0.3
RDX-209ENST00000530131 ZNF302Q9NR11 478 aa16.9■□□□□ 0.3
RDX-209ENST00000530131 PDGFCQ9NRA1 345 aa16.9■□□□□ 0.3
RDX-209ENST00000530131 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.9■□□□□ 0.3
RDX-209ENST00000530131 RBM47A0AV96 593 aaKnown RBP16.89■□□□□ 0.29
RDX-209ENST00000530131 TM4SF4P48230 202 aa16.89■□□□□ 0.29
RDX-209ENST00000530131 MORN1Q5T089 497 aa16.89■□□□□ 0.29
RDX-209ENST00000530131 TAPT1Q6NXT6 567 aa16.89■□□□□ 0.29
RDX-209ENST00000530131 TMC6Q7Z403 805 aa16.89■□□□□ 0.29
RDX-209ENST00000530131 ZC3H3Q8IXZ2 948 aaKnown RBP16.89■□□□□ 0.29
RDX-209ENST00000530131 ZNF507Q8TCN5 953 aa16.89■□□□□ 0.29
RDX-209ENST00000530131 SCFD2Q8WU76 684 aa16.89■□□□□ 0.29
RDX-209ENST00000530131 MAML3Q96JK9 1138 aa16.89■□□□□ 0.29
RDX-209ENST00000530131 MRPL44Q9H9J2 332 aaKnown RBP16.89■□□□□ 0.29
RDX-209ENST00000530131 RTN4Q9NQC3 1192 aaKnown RBP16.89■□□□□ 0.29
RDX-209ENST00000530131 IMPACTQ9P2X3 320 aa16.89■□□□□ 0.29
RDX-209ENST00000530131 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.89■□□□□ 0.29
RDX-209ENST00000530131 EIF3DO15371 548 aaKnown RBP eCLIP16.88■□□□□ 0.29
RDX-209ENST00000530131 TOMM70O94826 608 aa16.88■□□□□ 0.29
RDX-209ENST00000530131 SNAI1O95863 264 aaPredicted RBP16.88■□□□□ 0.29
RDX-209ENST00000530131 TPM3P06753 285 aa16.88■□□□□ 0.29
RDX-209ENST00000530131 NMT1P30419 496 aaKnown RBP16.88■□□□□ 0.29
RDX-209ENST00000530131 PBX1P40424 430 aa16.88■□□□□ 0.29
RDX-209ENST00000530131 COPB1P53618 953 aaKnown RBP16.88■□□□□ 0.29
RDX-209ENST00000530131 XKR3Q5GH77 459 aa16.88■□□□□ 0.29
RDX-209ENST00000530131 TMEM63BQ5T3F8 832 aa16.88■□□□□ 0.29
RDX-209ENST00000530131 OTUD6AQ7L8S5 288 aa16.88■□□□□ 0.29
RDX-209ENST00000530131 NELFCDQ8IXH7 590 aa16.88■□□□□ 0.29
RDX-209ENST00000530131 AFAP1L1Q8TED9 768 aa16.88■□□□□ 0.29
RDX-209ENST00000530131 CCDC43Q96MW1 224 aaKnown RBP16.88■□□□□ 0.29
RDX-209ENST00000530131 GPR20Q99678 358 aa16.88■□□□□ 0.29
RDX-209ENST00000530131 STRA6Q9BX79 667 aa16.88■□□□□ 0.29
RDX-209ENST00000530131 KCNF1Q9H3M0 494 aa16.88■□□□□ 0.29
RDX-209ENST00000530131 PDLIM7Q9NR12 457 aa16.88■□□□□ 0.29
RDX-209ENST00000530131 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.88■□□□□ 0.29
RDX-209ENST00000530131 TEX33O43247 280 aa16.88■□□□□ 0.29
RDX-209ENST00000530131 TTLL4Q14679 1199 aa16.88■□□□□ 0.29
RDX-209ENST00000530131 ZNF720Q7Z2F6 126 aa16.88■□□□□ 0.29
RDX-209ENST00000530131 DPP9Q86TI2 863 aa16.88■□□□□ 0.29
RDX-209ENST00000530131 NPLOC4Q8TAT6 608 aa16.88■□□□□ 0.29
RDX-209ENST00000530131 SEPT1Q8WYJ6 367 aa16.88■□□□□ 0.29
RDX-209ENST00000530131 COPS5Q92905 334 aa16.88■□□□□ 0.29
RDX-209ENST00000530131 EEF2KMTQ96G04 330 aa16.88■□□□□ 0.29
RDX-209ENST00000530131 TSG101Q99816 390 aa16.88■□□□□ 0.29
RDX-209ENST00000530131 MLXIPQ9HAP2 919 aa16.88■□□□□ 0.29
RDX-209ENST00000530131 TAB2Q9NYJ8 693 aa16.88■□□□□ 0.29
RDX-209ENST00000530131 ZMYM2Q9UBW7 1377 aa16.87■□□□□ 0.29
RDX-209ENST00000530131 UBE4BO95155 1302 aa16.87■□□□□ 0.29
RDX-209ENST00000530131 PPP1R37O75864 691 aa16.87■□□□□ 0.29
RDX-209ENST00000530131 PRPF6O94906 941 aaKnown RBP16.87■□□□□ 0.29
RDX-209ENST00000530131 GCNT3O95395 438 aa16.87■□□□□ 0.29
RDX-209ENST00000530131 OATP04181 439 aa16.87■□□□□ 0.29
RDX-209ENST00000530131 TXNP10599 105 aaKnown RBP16.87■□□□□ 0.29
RDX-209ENST00000530131 CRHR2Q13324 411 aa16.87■□□□□ 0.29
RDX-209ENST00000530131 PTPN21Q16825 1174 aa16.87■□□□□ 0.29
RDX-209ENST00000530131 KNOP1Q1ED39 458 aaKnown RBP16.87■□□□□ 0.29
RDX-209ENST00000530131 EDRF1Q3B7T1 1238 aa16.87■□□□□ 0.29
RDX-209ENST00000530131 HSDL1Q3SXM5 330 aa16.87■□□□□ 0.29
RDX-209ENST00000530131 ODR4Q5SWX8 454 aa16.87■□□□□ 0.29
RDX-209ENST00000530131 TRMT1LQ7Z2T5 733 aaKnown RBP16.87■□□□□ 0.29
RDX-209ENST00000530131 ZSCAN30Q86W11 494 aa16.87■□□□□ 0.29
RDX-209ENST00000530131 FAM114A1Q8IWE2 563 aa16.87■□□□□ 0.29
RDX-209ENST00000530131 CEP170P1Q96L14 293 aa16.87■□□□□ 0.29
RDX-209ENST00000530131 CNOT6LQ96LI5 555 aaKnown RBP16.87■□□□□ 0.29
RDX-209ENST00000530131 ZNF830Q96NB3 372 aaPredicted RBP16.87■□□□□ 0.29
RDX-209ENST00000530131 CYP26B1Q9NR63 512 aa16.87■□□□□ 0.29
RDX-209ENST00000530131 SEPT9Q9UHD8 586 aaPredicted RBP16.87■□□□□ 0.29
RDX-209ENST00000530131 TRAF3IP3Q9Y228 551 aa16.87■□□□□ 0.29
RDX-209ENST00000530131 ZKSCAN5Q9Y2L8 839 aa16.87■□□□□ 0.29
RDX-209ENST00000530131 MGAMO43451 1857 aa16.87■□□□□ 0.29
RDX-209ENST00000530131 LGR5O75473 907 aa16.86■□□□□ 0.29
RDX-209ENST00000530131 TCF7P36402 384 aaPredicted RBP16.86■□□□□ 0.29
RDX-209ENST00000530131 PPP4R3CPQ6ZMV5 832 aa16.86■□□□□ 0.29
RDX-209ENST00000530131 FILIP1Q7Z7B0 1213 aa16.86■□□□□ 0.29
RDX-209ENST00000530131 FAM178BQ8IXR5 827 aa16.86■□□□□ 0.29
RDX-209ENST00000530131 ANKRD20A12PQ8NF67 263 aa16.86■□□□□ 0.29
RDX-209ENST00000530131 USP6NLQ92738 828 aa16.86■□□□□ 0.29
RDX-209ENST00000530131 DRC1Q96MC2 740 aa16.86■□□□□ 0.29
RDX-209ENST00000530131 CEP89Q96ST8 783 aa16.86■□□□□ 0.29
RDX-209ENST00000530131 ZFYVE28Q9HCC9 887 aa16.86■□□□□ 0.29
RDX-209ENST00000530131 GPRC5CQ9NQ84 441 aa16.86■□□□□ 0.29
RDX-209ENST00000530131 NKRFO15226 690 aaKnown RBP eCLIP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms