RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 ATG7O95352 703 aa16■□□□□ 0.15
TTC39A-216ENST00000530004 IDEP14735 1019 aa16■□□□□ 0.15
TTC39A-216ENST00000530004 CYP11B2P19099 503 aa16■□□□□ 0.15
TTC39A-216ENST00000530004 PRCPP42785 496 aa16■□□□□ 0.15
TTC39A-216ENST00000530004 ZNF75DP51815 510 aa16■□□□□ 0.15
TTC39A-216ENST00000530004 JAK3P52333 1124 aa16■□□□□ 0.15
TTC39A-216ENST00000530004 STX17P56962 302 aa16■□□□□ 0.15
TTC39A-216ENST00000530004 GJA9P57773 515 aa16■□□□□ 0.15
TTC39A-216ENST00000530004 LHX8Q68G74 356 aa16■□□□□ 0.15
TTC39A-216ENST00000530004 SYT2Q8N9I0 419 aaPredicted RBP16■□□□□ 0.15
TTC39A-216ENST00000530004 NEK9Q8TD19 979 aa16■□□□□ 0.15
TTC39A-216ENST00000530004 SEPT1Q8WYJ6 367 aa16■□□□□ 0.15
TTC39A-216ENST00000530004 DNAJC19Q96DA6 116 aa16■□□□□ 0.15
TTC39A-216ENST00000530004 RNF208Q9H0X6 261 aa16■□□□□ 0.15
TTC39A-216ENST00000530004 UPF3AQ9H1J1 476 aaKnown RBP16■□□□□ 0.15
TTC39A-216ENST00000530004 XPNPEP3Q9NQH7 507 aa16■□□□□ 0.15
TTC39A-216ENST00000530004 FANCLQ9NW38 375 aa16■□□□□ 0.15
TTC39A-216ENST00000530004 NFE2L3Q9Y4A8 694 aa16■□□□□ 0.15
TTC39A-216ENST00000530004 SAMM50Q9Y512 469 aa16■□□□□ 0.15
TTC39A-216ENST00000530004 PCDHA10Q9Y5I2 948 aa16■□□□□ 0.15
TTC39A-216ENST00000530004 GSTTP1A0A1W2PQM5 241 aa16■□□□□ 0.15
TTC39A-216ENST00000530004 A6NJR5 290 aa16■□□□□ 0.15
TTC39A-216ENST00000530004 ADAMTS4O75173 837 aa16■□□□□ 0.15
TTC39A-216ENST00000530004 EYA4O95677 639 aa16■□□□□ 0.15
TTC39A-216ENST00000530004 PGK1P00558 417 aa16■□□□□ 0.15
TTC39A-216ENST00000530004 MUTP22033 750 aa16■□□□□ 0.15
TTC39A-216ENST00000530004 NKX3-2P78367 333 aa16■□□□□ 0.15
TTC39A-216ENST00000530004 IRX5P78411 483 aaPredicted RBP16■□□□□ 0.15
TTC39A-216ENST00000530004 PAK1Q13153 545 aa16■□□□□ 0.15
TTC39A-216ENST00000530004 ABHD15Q6UXT9 468 aa16■□□□□ 0.15
TTC39A-216ENST00000530004 ADSSL1Q8N142 457 aa16■□□□□ 0.15
TTC39A-216ENST00000530004 BANK1Q8NDB2 785 aa16■□□□□ 0.15
TTC39A-216ENST00000530004 RDM1Q8NG50 284 aa16■□□□□ 0.15
TTC39A-216ENST00000530004 PIGOQ8TEQ8 1089 aa16■□□□□ 0.15
TTC39A-216ENST00000530004 LXNQ9BS40 222 aa16■□□□□ 0.15
TTC39A-216ENST00000530004 GTPBP4Q9BZE4 634 aaKnown RBP16■□□□□ 0.15
TTC39A-216ENST00000530004 BHMT2Q9H2M3 363 aa16■□□□□ 0.15
TTC39A-216ENST00000530004 NPHP3-ACAD11A0A0J9YXS1 232 aa15.99■□□□□ 0.15
TTC39A-216ENST00000530004 KRT18P05783 430 aaKnown RBP15.99■□□□□ 0.15
TTC39A-216ENST00000530004 MMP3P08254 477 aa15.99■□□□□ 0.15
TTC39A-216ENST00000530004 C6orf222P0C671 652 aaPredicted RBP15.99■□□□□ 0.15
TTC39A-216ENST00000530004 ATP1A3P13637 1013 aa15.99■□□□□ 0.15
TTC39A-216ENST00000530004 TCF7P36402 384 aaPredicted RBP15.99■□□□□ 0.15
TTC39A-216ENST00000530004 CPT1AP50416 773 aa15.99■□□□□ 0.15
TTC39A-216ENST00000530004 STK4Q13043 487 aa15.99■□□□□ 0.15
TTC39A-216ENST00000530004 STIM1Q13586 685 aa15.99■□□□□ 0.15
TTC39A-216ENST00000530004 ARSHQ5FYA8 562 aa15.99■□□□□ 0.15
TTC39A-216ENST00000530004 MIS18BP1Q6P0N0 1132 aa15.99■□□□□ 0.15
TTC39A-216ENST00000530004 NELFBQ8WX92 580 aa15.99■□□□□ 0.15
TTC39A-216ENST00000530004 HPS3Q969F9 1004 aa15.99■□□□□ 0.15
TTC39A-216ENST00000530004 TRIM44Q96DX7 344 aaPredicted RBP15.99■□□□□ 0.15
TTC39A-216ENST00000530004 SPC25Q9HBM1 224 aa15.99■□□□□ 0.15
TTC39A-216ENST00000530004 WRAP73Q9P2S5 460 aaPredicted RBP15.99■□□□□ 0.15
TTC39A-216ENST00000530004 RWDD2AQ9UIY3 292 aa15.99■□□□□ 0.15
TTC39A-216ENST00000530004 IGKV6D-21A0A0A0MT36 114 aa15.98■□□□□ 0.15
TTC39A-216ENST00000530004 MYADML2A6NDP7 307 aa15.98■□□□□ 0.15
TTC39A-216ENST00000530004 PPFIA4O75335 1185 aa15.98■□□□□ 0.15
TTC39A-216ENST00000530004 P4HBP07237 508 aaKnown RBP15.98■□□□□ 0.15
TTC39A-216ENST00000530004 PSAPP07602 524 aa15.98■□□□□ 0.15
TTC39A-216ENST00000530004 SUPT20HL2P0C7V6 817 aa15.98■□□□□ 0.15
TTC39A-216ENST00000530004 HOXD8P13378 290 aaPredicted RBP15.98■□□□□ 0.15
TTC39A-216ENST00000530004 FSCN1Q16658 493 aaKnown RBP15.98■□□□□ 0.15
TTC39A-216ENST00000530004 SPATA1Q5VX52 437 aa15.98■□□□□ 0.15
TTC39A-216ENST00000530004 DEFB118Q96PH6 123 aa15.98■□□□□ 0.15
TTC39A-216ENST00000530004 NACC1Q96RE7 527 aa15.98■□□□□ 0.15
TTC39A-216ENST00000530004 PANK4Q9NVE7 773 aa15.98■□□□□ 0.15
TTC39A-216ENST00000530004 BEX3Q00994 111 aa15.98■□□□□ 0.15
TTC39A-216ENST00000530004 EHHADHQ08426 723 aa15.98■□□□□ 0.15
TTC39A-216ENST00000530004 RAD51AP2Q09MP3 1159 aa15.98■□□□□ 0.15
TTC39A-216ENST00000530004 COASYQ13057 564 aa15.98■□□□□ 0.15
TTC39A-216ENST00000530004 DGKDQ16760 1214 aa15.98■□□□□ 0.15
TTC39A-216ENST00000530004 BRDTQ58F21 947 aaPredicted RBP15.98■□□□□ 0.15
TTC39A-216ENST00000530004 CCDC60Q8IWA6 550 aaPredicted RBP15.98■□□□□ 0.15
TTC39A-216ENST00000530004 CCDC65Q8IXS2 484 aa15.98■□□□□ 0.15
TTC39A-216ENST00000530004 KIAA0895Q8NCT3 520 aa15.98■□□□□ 0.15
TTC39A-216ENST00000530004 PCYT2Q99447 389 aa15.98■□□□□ 0.15
TTC39A-216ENST00000530004 SLC39A2Q9NP94 309 aa15.98■□□□□ 0.15
TTC39A-216ENST00000530004 PSMA7O14818 248 aa15.97■□□□□ 0.15
TTC39A-216ENST00000530004 ZBTB39O15060 712 aa15.97■□□□□ 0.15
TTC39A-216ENST00000530004 PTMAP06454 111 aaKnown RBP15.97■□□□□ 0.15
TTC39A-216ENST00000530004 CST5P28325 142 aaPredicted RBP15.97■□□□□ 0.15
TTC39A-216ENST00000530004 FANCCQ00597 558 aa15.97■□□□□ 0.15
TTC39A-216ENST00000530004 CACNB1Q02641 598 aaPredicted RBP15.97■□□□□ 0.15
TTC39A-216ENST00000530004 PSMD2Q13200 908 aa15.97■□□□□ 0.15
TTC39A-216ENST00000530004 HSP90AA4PQ58FG1 418 aa15.97■□□□□ 0.15
TTC39A-216ENST00000530004 GNASQ5JWF2 1037 aa15.97■□□□□ 0.15
TTC39A-216ENST00000530004 SWSAP1Q6NVH7 229 aa15.97■□□□□ 0.15
TTC39A-216ENST00000530004 KLHDC9Q8NEP7 349 aa15.97■□□□□ 0.15
TTC39A-216ENST00000530004 RUSC1Q9BVN2 902 aa15.97■□□□□ 0.15
TTC39A-216ENST00000530004 ZSWIM4Q9H7M6 989 aa15.97■□□□□ 0.15
TTC39A-216ENST00000530004 SAMSN1Q9NSI8 373 aaKnown RBP15.97■□□□□ 0.15
TTC39A-216ENST00000530004 DOCK5Q9H7D0 1870 aa15.96■□□□□ 0.15
TTC39A-216ENST00000530004 BACH1O14867 736 aa15.96■□□□□ 0.15
TTC39A-216ENST00000530004 LGR5O75473 907 aa15.96■□□□□ 0.15
TTC39A-216ENST00000530004 ZNF18P17022 549 aa15.96■□□□□ 0.15
TTC39A-216ENST00000530004 PPP1R2P41236 205 aa15.96■□□□□ 0.15
TTC39A-216ENST00000530004 QARSP47897 775 aaKnown RBP15.96■□□□□ 0.15
TTC39A-216ENST00000530004 TPD52L1Q16890 204 aaPredicted RBP15.96■□□□□ 0.15
TTC39A-216ENST00000530004 COBLL1Q53SF7 1204 aa15.96■□□□□ 0.15
TTC39A-216ENST00000530004 UTP14CQ5TAP6 766 aaKnown RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms