RNA–Protein interactions for RNA: ENST00000529998.5

UBASH3B-205, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 4

Gene UBASH3B, Length 698 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-205ENST00000529998 LXNQ9BS40 222 aa9.74□□□□□ -0.85
UBASH3B-205ENST00000529998 NIFKQ9BYG3 293 aaKnown RBP9.74□□□□□ -0.85
UBASH3B-205ENST00000529998 FAM49AQ9H0Q0 323 aaPredicted RBP9.74□□□□□ -0.85
UBASH3B-205ENST00000529998 IL23AQ9NPF7 189 aa9.74□□□□□ -0.85
UBASH3B-205ENST00000529998 SEPT9Q9UHD8 586 aaPredicted RBP9.74□□□□□ -0.85
UBASH3B-205ENST00000529998 PCDHA2Q9Y5H9 948 aa9.74□□□□□ -0.85
UBASH3B-205ENST00000529998 SMIM35A0A1B0GVV1 85 aa9.73□□□□□ -0.85
UBASH3B-205ENST00000529998 RSPH10B2B2RC85 870 aa9.73□□□□□ -0.85
UBASH3B-205ENST00000529998 LAD1O00515 517 aa9.73□□□□□ -0.85
UBASH3B-205ENST00000529998 MED24O75448 989 aa9.73□□□□□ -0.85
UBASH3B-205ENST00000529998 CHRNA1P02708 482 aa9.73□□□□□ -0.85
UBASH3B-205ENST00000529998 RSPH10BP0C881 870 aa9.73□□□□□ -0.85
UBASH3B-205ENST00000529998 SPATA31C1P0DKV0 1188 aa9.73□□□□□ -0.85
UBASH3B-205ENST00000529998 FXR2P51116 673 aaKnown RBP eCLIP9.73□□□□□ -0.85
UBASH3B-205ENST00000529998 NPEPPSP55786 919 aa9.73□□□□□ -0.85
UBASH3B-205ENST00000529998 ATP2C1P98194 919 aaPredicted RBP9.73□□□□□ -0.85
UBASH3B-205ENST00000529998 TMEM62Q0P6H9 643 aa9.73□□□□□ -0.85
UBASH3B-205ENST00000529998 PKP1Q13835 747 aa9.73□□□□□ -0.85
UBASH3B-205ENST00000529998 PDIA5Q14554 519 aa9.73□□□□□ -0.85
UBASH3B-205ENST00000529998 SF3A1Q15459 793 aaKnown RBP9.73□□□□□ -0.85
UBASH3B-205ENST00000529998 TCTN1Q2MV58 587 aa9.73□□□□□ -0.85
UBASH3B-205ENST00000529998 MTERF2Q49AM1 385 aa9.73□□□□□ -0.85
UBASH3B-205ENST00000529998 FAM26DQ5JW98 314 aa9.73□□□□□ -0.85
UBASH3B-205ENST00000529998 FOXD4L5Q5VV16 416 aaPredicted RBP9.73□□□□□ -0.85
UBASH3B-205ENST00000529998 PLA2G4FQ68DD2 849 aa9.73□□□□□ -0.85
UBASH3B-205ENST00000529998 TAF2Q6P1X5 1199 aa9.73□□□□□ -0.85
UBASH3B-205ENST00000529998 RPAINQ86UA6 219 aa9.73□□□□□ -0.85
UBASH3B-205ENST00000529998 CATSPER3Q86XQ3 398 aa9.73□□□□□ -0.85
UBASH3B-205ENST00000529998 C4orf19Q8IY42 314 aa9.73□□□□□ -0.85
UBASH3B-205ENST00000529998 RPUSD2Q8IZ73 545 aaKnown RBP9.73□□□□□ -0.85
UBASH3B-205ENST00000529998 KIAA0319LQ8IZA0 1049 aa9.73□□□□□ -0.85
UBASH3B-205ENST00000529998 TDHQ8IZJ6 230 aa9.73□□□□□ -0.85
UBASH3B-205ENST00000529998 FOXD4L4Q8WXT5 416 aaPredicted RBP9.73□□□□□ -0.85
UBASH3B-205ENST00000529998 FTOQ9C0B1 505 aaKnown RBP eCLIP9.73□□□□□ -0.85
UBASH3B-205ENST00000529998 ZSWIM4Q9H7M6 989 aa9.73□□□□□ -0.85
UBASH3B-205ENST00000529998 CEP131Q9UPN4 1083 aa9.73□□□□□ -0.85
UBASH3B-205ENST00000529998 CLIC4Q9Y696 253 aa9.73□□□□□ -0.85
UBASH3B-205ENST00000529998 PTPRSQ13332 1948 aa9.72□□□□□ -0.85
UBASH3B-205ENST00000529998 TRIOBPQ9H2D6 2365 aa9.72□□□□□ -0.85
UBASH3B-205ENST00000529998 PP2D1A8MPX8 630 aa9.72□□□□□ -0.85
UBASH3B-205ENST00000529998 MAGEB2O15479 319 aa9.72□□□□□ -0.85
UBASH3B-205ENST00000529998 DKC1O60832 514 aaKnown RBP eCLIP9.72□□□□□ -0.85
UBASH3B-205ENST00000529998 CAND2O75155 1236 aa9.72□□□□□ -0.85
UBASH3B-205ENST00000529998 FGBP02675 491 aa9.72□□□□□ -0.85
UBASH3B-205ENST00000529998 CXCL10P02778 98 aa9.72□□□□□ -0.85
UBASH3B-205ENST00000529998 CDC25AP30304 524 aa9.72□□□□□ -0.85
UBASH3B-205ENST00000529998 YWHABP31946 246 aaKnown RBP9.72□□□□□ -0.85
UBASH3B-205ENST00000529998 RFC2P35250 354 aa9.72□□□□□ -0.85
UBASH3B-205ENST00000529998 PRPHP41219 470 aa9.72□□□□□ -0.85
UBASH3B-205ENST00000529998 CLCN3P51790 818 aa9.72□□□□□ -0.85
UBASH3B-205ENST00000529998 MGAT3Q09327 533 aa9.72□□□□□ -0.85
UBASH3B-205ENST00000529998 MKRN4PQ13434 485 aaPredicted RBP9.72□□□□□ -0.85
UBASH3B-205ENST00000529998 ECM1Q16610 540 aa9.72□□□□□ -0.85
UBASH3B-205ENST00000529998 TMEM266Q2M3C6 531 aa9.72□□□□□ -0.85
UBASH3B-205ENST00000529998 HABP4Q5JVS0 413 aaKnown RBP9.72□□□□□ -0.85
UBASH3B-205ENST00000529998 EFCAB12Q6NXP0 572 aa9.72□□□□□ -0.85
UBASH3B-205ENST00000529998 DTHD1Q6ZMT9 781 aa9.72□□□□□ -0.85
UBASH3B-205ENST00000529998 OTOP2Q7RTS6 562 aa9.72□□□□□ -0.85
UBASH3B-205ENST00000529998 RSPH3Q86UC2 560 aa9.72□□□□□ -0.85
UBASH3B-205ENST00000529998 LRRC71Q8N4P6 559 aa9.72□□□□□ -0.85
UBASH3B-205ENST00000529998 METTL13Q8N6R0 699 aa9.72□□□□□ -0.85
UBASH3B-205ENST00000529998 LINC01465Q8N7H1 131 aa9.72□□□□□ -0.85
UBASH3B-205ENST00000529998 IGSF22Q8N9C0 903 aa9.72□□□□□ -0.85
UBASH3B-205ENST00000529998 POLR3CQ9BUI4 534 aaPredicted RBP9.72□□□□□ -0.85
UBASH3B-205ENST00000529998 ZSCAN16Q9H4T2 348 aaPredicted RBP9.72□□□□□ -0.85
UBASH3B-205ENST00000529998 SUGCTQ9HAC7 445 aa9.72□□□□□ -0.85
UBASH3B-205ENST00000529998 CDHR5Q9HBB8 845 aa9.72□□□□□ -0.85
UBASH3B-205ENST00000529998 CYP26B1Q9NR63 512 aa9.72□□□□□ -0.85
UBASH3B-205ENST00000529998 LRWD1Q9UFC0 647 aa9.72□□□□□ -0.85
UBASH3B-205ENST00000529998 CDY2AQ9Y6F7 541 aa9.72□□□□□ -0.85
UBASH3B-205ENST00000529998 GBF1Q92538 1859 aa9.72□□□□□ -0.85
UBASH3B-205ENST00000529998 IGKV6-21A0A0C4DH24 114 aa9.71□□□□□ -0.86
UBASH3B-205ENST00000529998 A0A1W2PPC1 479 aa9.71□□□□□ -0.86
UBASH3B-205ENST00000529998 VWA3AA6NCI4 1184 aa9.71□□□□□ -0.86
UBASH3B-205ENST00000529998 MAFO75444 373 aaPredicted RBP9.71□□□□□ -0.86
UBASH3B-205ENST00000529998 LYPLA2O95372 231 aa9.71□□□□□ -0.86
UBASH3B-205ENST00000529998 PARNO95453 639 aaKnown RBP9.71□□□□□ -0.86
UBASH3B-205ENST00000529998 VTNP04004 478 aa9.71□□□□□ -0.86
UBASH3B-205ENST00000529998 ZSCAN22P10073 491 aaPredicted RBP9.71□□□□□ -0.86
UBASH3B-205ENST00000529998 RPA1P27694 616 aa9.71□□□□□ -0.86
UBASH3B-205ENST00000529998 MRPS6P82932 125 aaKnown RBP9.71□□□□□ -0.86
UBASH3B-205ENST00000529998 CEBPZQ03701 1054 aaKnown RBP9.71□□□□□ -0.86
UBASH3B-205ENST00000529998 GRIN1Q05586 938 aa9.71□□□□□ -0.86
UBASH3B-205ENST00000529998 TBC1D8BQ0IIM8 1120 aa9.71□□□□□ -0.86
UBASH3B-205ENST00000529998 DRP2Q13474 957 aa9.71□□□□□ -0.86
UBASH3B-205ENST00000529998 BECN1Q14457 450 aa9.71□□□□□ -0.86
UBASH3B-205ENST00000529998 PTPAQ15257 358 aa9.71□□□□□ -0.86
UBASH3B-205ENST00000529998 XKR9Q5GH70 373 aa9.71□□□□□ -0.86
UBASH3B-205ENST00000529998 RASIP1Q5U651 963 aa9.71□□□□□ -0.86
UBASH3B-205ENST00000529998 ARL6IP4Q66PJ3 421 aaKnown RBP9.71□□□□□ -0.86
UBASH3B-205ENST00000529998 PSRC1Q6PGN9 363 aaPredicted RBP9.71□□□□□ -0.86
UBASH3B-205ENST00000529998 NME8Q8N427 588 aa9.71□□□□□ -0.86
UBASH3B-205ENST00000529998 PIP4P2Q8N4L2 257 aa9.71□□□□□ -0.86
UBASH3B-205ENST00000529998 NEK9Q8TD19 979 aa9.71□□□□□ -0.86
UBASH3B-205ENST00000529998 PIGOQ8TEQ8 1089 aa9.71□□□□□ -0.86
UBASH3B-205ENST00000529998 HERVK_113Q902F9 699 aa9.71□□□□□ -0.86
UBASH3B-205ENST00000529998 CEP170P1Q96L14 293 aa9.71□□□□□ -0.86
UBASH3B-205ENST00000529998 USP28Q96RU2 1077 aa9.71□□□□□ -0.86
UBASH3B-205ENST00000529998 MMTAG2Q9BU76 263 aaKnown RBP9.71□□□□□ -0.86
UBASH3B-205ENST00000529998 TUFT1Q9NNX1 390 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms