RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 MRC1P22897 1456 aa6.68□□□□□ -1.34
AMBRA1-209ENST00000529963 SCN11AQ9UI33 1791 aa6.68□□□□□ -1.34
AMBRA1-209ENST00000529963 COL15A1P39059 1388 aa6.68□□□□□ -1.34
AMBRA1-209ENST00000529963 ARFGEF1Q9Y6D6 1849 aa6.68□□□□□ -1.34
AMBRA1-209ENST00000529963 PAPLNO95428 1278 aa6.68□□□□□ -1.34
AMBRA1-209ENST00000529963 BCL6P41182 706 aa6.68□□□□□ -1.34
AMBRA1-209ENST00000529963 IRAK1P51617 712 aa6.68□□□□□ -1.34
AMBRA1-209ENST00000529963 TKFCQ3LXA3 575 aa6.68□□□□□ -1.34
AMBRA1-209ENST00000529963 ACBD5Q5T8D3 534 aaPredicted RBP6.68□□□□□ -1.34
AMBRA1-209ENST00000529963 E4F1Q66K89 784 aaPredicted RBP6.68□□□□□ -1.34
AMBRA1-209ENST00000529963 SDE2Q6IQ49 451 aa6.68□□□□□ -1.34
AMBRA1-209ENST00000529963 GALNT18Q6P9A2 607 aa6.68□□□□□ -1.34
AMBRA1-209ENST00000529963 ATG4DQ86TL0 474 aaPredicted RBP6.68□□□□□ -1.34
AMBRA1-209ENST00000529963 NLRX1Q86UT6 975 aa6.68□□□□□ -1.34
AMBRA1-209ENST00000529963 TTC5Q8N0Z6 440 aa6.68□□□□□ -1.34
AMBRA1-209ENST00000529963 CHAMP1Q96JM3 812 aa6.68□□□□□ -1.34
AMBRA1-209ENST00000529963 NDOR1Q9UHB4 597 aa6.68□□□□□ -1.34
AMBRA1-209ENST00000529963 TRBV23OR9-2A0A075B6M9 112 aa6.67□□□□□ -1.34
AMBRA1-209ENST00000529963 NPHS1O60500 1241 aa6.67□□□□□ -1.34
AMBRA1-209ENST00000529963 STARD3NLO95772 234 aa6.67□□□□□ -1.34
AMBRA1-209ENST00000529963 FUCA1P04066 466 aa6.67□□□□□ -1.34
AMBRA1-209ENST00000529963 FPR2P25090 351 aa6.67□□□□□ -1.34
AMBRA1-209ENST00000529963 KCNAB2Q13303 367 aa6.67□□□□□ -1.34
AMBRA1-209ENST00000529963 NFIXQ14938 502 aa6.67□□□□□ -1.34
AMBRA1-209ENST00000529963 NR0B2Q15466 257 aa6.67□□□□□ -1.34
AMBRA1-209ENST00000529963 MTHFSDQ2M296 383 aaKnown RBP6.67□□□□□ -1.34
AMBRA1-209ENST00000529963 IQCEQ6IPM2 695 aa6.67□□□□□ -1.34
AMBRA1-209ENST00000529963 HOMER1Q86YM7 354 aa6.67□□□□□ -1.34
AMBRA1-209ENST00000529963 TEX2Q8IWB9 1127 aa6.67□□□□□ -1.34
AMBRA1-209ENST00000529963 SLC7A14Q8TBB6 771 aa6.67□□□□□ -1.34
AMBRA1-209ENST00000529963 APPBP2Q92624 585 aa6.67□□□□□ -1.34
AMBRA1-209ENST00000529963 CLUHP3Q96NS8 147 aa6.67□□□□□ -1.34
AMBRA1-209ENST00000529963 RXFP1Q9HBX9 757 aa6.67□□□□□ -1.34
AMBRA1-209ENST00000529963 MARCH2Q9P0N8 246 aa6.67□□□□□ -1.34
AMBRA1-209ENST00000529963 PPARGC1AQ9UBK2 798 aaKnown RBP6.67□□□□□ -1.34
AMBRA1-209ENST00000529963 ZBTB1Q9Y2K1 713 aa6.67□□□□□ -1.34
AMBRA1-209ENST00000529963 NPFFR2Q9Y5X5 522 aa6.67□□□□□ -1.34
AMBRA1-209ENST00000529963 KIF7Q2M1P5 1343 aa6.67□□□□□ -1.34
AMBRA1-209ENST00000529963 KCPQ6ZWJ8 1503 aa6.67□□□□□ -1.34
AMBRA1-209ENST00000529963 CDC45O75419 566 aa6.66□□□□□ -1.34
AMBRA1-209ENST00000529963 SERPINB2P05120 415 aa6.66□□□□□ -1.34
AMBRA1-209ENST00000529963 CYP4F8P98187 520 aa6.66□□□□□ -1.34
AMBRA1-209ENST00000529963 TEFQ10587 303 aa6.66□□□□□ -1.34
AMBRA1-209ENST00000529963 CC2D1BQ5T0F9 858 aaKnown RBP6.66□□□□□ -1.34
AMBRA1-209ENST00000529963 C2CD5Q86YS7 1000 aa6.66□□□□□ -1.34
AMBRA1-209ENST00000529963 LILRA2Q8N149 483 aa6.66□□□□□ -1.34
AMBRA1-209ENST00000529963 TTLL6Q8N841 843 aa6.66□□□□□ -1.34
AMBRA1-209ENST00000529963 DCAF4Q8WV16 495 aa6.66□□□□□ -1.34
AMBRA1-209ENST00000529963 ASIC4Q96FT7 647 aa6.66□□□□□ -1.34
AMBRA1-209ENST00000529963 NCOA5Q9HCD5 579 aaKnown RBP6.66□□□□□ -1.34
AMBRA1-209ENST00000529963 ACSL6Q9UKU0 697 aa6.66□□□□□ -1.34
AMBRA1-209ENST00000529963 ADAMTS7Q9UKP4 1686 aa6.66□□□□□ -1.34
AMBRA1-209ENST00000529963 H0YIN7 160 aa6.66□□□□□ -1.34
AMBRA1-209ENST00000529963 VEGFAP15692 232 aaPredicted RBP6.66□□□□□ -1.34
AMBRA1-209ENST00000529963 KCNMB1Q16558 191 aa6.66□□□□□ -1.34
AMBRA1-209ENST00000529963 ZC3H12BQ5HYM0 836 aaKnown RBP6.66□□□□□ -1.34
AMBRA1-209ENST00000529963 STYK1Q6J9G0 422 aa6.66□□□□□ -1.34
AMBRA1-209ENST00000529963 NLRP10Q86W26 655 aa6.66□□□□□ -1.34
AMBRA1-209ENST00000529963 ZSWIM9Q86XI8 627 aa6.66□□□□□ -1.34
AMBRA1-209ENST00000529963 USP33Q8TEY7 942 aa6.66□□□□□ -1.34
AMBRA1-209ENST00000529963 PTPRN2Q92932 1015 aa6.66□□□□□ -1.34
AMBRA1-209ENST00000529963 TEX13AQ9BXU3 409 aaPredicted RBP6.66□□□□□ -1.34
AMBRA1-209ENST00000529963 GPR27Q9NS67 375 aa6.66□□□□□ -1.34
AMBRA1-209ENST00000529963 PCDHA9Q9Y5H5 950 aa6.66□□□□□ -1.34
AMBRA1-209ENST00000529963 TIMM13Q9Y5L4 95 aaPredicted RBP6.66□□□□□ -1.34
AMBRA1-209ENST00000529963 A0A1W2PQJ5 194 aa6.65□□□□□ -1.35
AMBRA1-209ENST00000529963 TAL1P17542 331 aaPredicted RBP6.65□□□□□ -1.35
AMBRA1-209ENST00000529963 LBX1P52954 281 aa6.65□□□□□ -1.35
AMBRA1-209ENST00000529963 EIF5P55010 431 aaKnown RBP6.65□□□□□ -1.35
AMBRA1-209ENST00000529963 RPL11P62913 178 aaKnown RBP6.65□□□□□ -1.35
AMBRA1-209ENST00000529963 TESK1Q15569 626 aa6.65□□□□□ -1.35
AMBRA1-209ENST00000529963 ADGRF1Q5T601 910 aa6.65□□□□□ -1.35
AMBRA1-209ENST00000529963 BICRALQ6AI39 1079 aa6.65□□□□□ -1.35
AMBRA1-209ENST00000529963 ZNF790Q6PG37 636 aa6.65□□□□□ -1.35
AMBRA1-209ENST00000529963 CEP68Q76N32 757 aa6.65□□□□□ -1.35
AMBRA1-209ENST00000529963 LZTR1Q8N653 840 aa6.65□□□□□ -1.35
AMBRA1-209ENST00000529963 FAM168AQ92567 244 aa6.65□□□□□ -1.35
AMBRA1-209ENST00000529963 LIN37Q96GY3 246 aaPredicted RBP6.65□□□□□ -1.35
AMBRA1-209ENST00000529963 MTA3Q9BTC8 594 aa6.65□□□□□ -1.35
AMBRA1-209ENST00000529963 KCNK12Q9HB15 430 aa6.65□□□□□ -1.35
AMBRA1-209ENST00000529963 PDLIM7Q9NR12 457 aa6.65□□□□□ -1.35
AMBRA1-209ENST00000529963 PCDHA8Q9Y5H6 950 aa6.65□□□□□ -1.35
AMBRA1-209ENST00000529963 NPC1L1Q9UHC9 1359 aa6.64□□□□□ -1.35
AMBRA1-209ENST00000529963 HEG1Q9ULI3 1381 aa6.64□□□□□ -1.35
AMBRA1-209ENST00000529963 GLTPD2A6NH11 291 aa6.64□□□□□ -1.35
AMBRA1-209ENST00000529963 C22orf46C9J442 243 aa6.64□□□□□ -1.35
AMBRA1-209ENST00000529963 BIN1O00499 593 aa6.64□□□□□ -1.35
AMBRA1-209ENST00000529963 NPHP1O15259 732 aa6.64□□□□□ -1.35
AMBRA1-209ENST00000529963 MYO1BO43795 1136 aa6.64□□□□□ -1.35
AMBRA1-209ENST00000529963 ITGB5P18084 799 aa6.64□□□□□ -1.35
AMBRA1-209ENST00000529963 PDE6BP35913 854 aa6.64□□□□□ -1.35
AMBRA1-209ENST00000529963 IL6STP40189 918 aaPredicted RBP6.64□□□□□ -1.35
AMBRA1-209ENST00000529963 GABREP78334 506 aa6.64□□□□□ -1.35
AMBRA1-209ENST00000529963 C16orf86Q6ZW13 317 aa6.64□□□□□ -1.35
AMBRA1-209ENST00000529963 FGD2Q7Z6J4 655 aa6.64□□□□□ -1.35
AMBRA1-209ENST00000529963 MTDHQ86UE4 582 aaKnown RBP6.64□□□□□ -1.35
AMBRA1-209ENST00000529963 ZNF622Q969S3 477 aaKnown RBP eCLIP6.64□□□□□ -1.35
AMBRA1-209ENST00000529963 GCC1Q96CN9 775 aa6.64□□□□□ -1.35
AMBRA1-209ENST00000529963 ZNF496Q96IT1 587 aaPredicted RBP6.64□□□□□ -1.35
AMBRA1-209ENST00000529963 FMNL2Q96PY5 1086 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms