RNA–Protein interactions for RNA: ENST00000529848.1

SVIP-203, Transcript of small VCP interacting protein, humanhuman

TSL 5

Gene SVIP, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-203ENST00000529848 NCKAP1LP55160 1127 aa5.25□□□□□ -1.57
SVIP-203ENST00000529848 PIN1Q13526 163 aaPredicted RBP5.25□□□□□ -1.57
SVIP-203ENST00000529848 PDCD1Q15116 288 aa5.25□□□□□ -1.57
SVIP-203ENST00000529848 MLANAQ16655 118 aa5.25□□□□□ -1.57
SVIP-203ENST00000529848 SKIDA1Q1XH10 827 aa5.25□□□□□ -1.57
SVIP-203ENST00000529848 INAVAQ3KP66 663 aa5.25□□□□□ -1.57
SVIP-203ENST00000529848 SLFN12LQ6IEE8 588 aa5.25□□□□□ -1.57
SVIP-203ENST00000529848 PROSER1Q86XN7 944 aa5.25□□□□□ -1.57
SVIP-203ENST00000529848 CMIPQ8IY22 773 aa5.25□□□□□ -1.57
SVIP-203ENST00000529848 SMARCC2Q8TAQ2 1214 aa5.25□□□□□ -1.57
SVIP-203ENST00000529848 IGDCC4Q8TDY8 1250 aa5.25□□□□□ -1.57
SVIP-203ENST00000529848 FAXDC2Q96IV6 333 aa5.25□□□□□ -1.57
SVIP-203ENST00000529848 TMEM209Q96SK2 561 aa5.25□□□□□ -1.57
SVIP-203ENST00000529848 MYL10Q9BUA6 226 aa5.25□□□□□ -1.57
SVIP-203ENST00000529848 ANO3Q9BYT9 981 aa5.25□□□□□ -1.57
SVIP-203ENST00000529848 SLC13A1Q9BZW2 595 aa5.25□□□□□ -1.57
SVIP-203ENST00000529848 MCOLN1Q9GZU1 580 aa5.25□□□□□ -1.57
SVIP-203ENST00000529848 POFUT1Q9H488 388 aa5.25□□□□□ -1.57
SVIP-203ENST00000529848 LUC7LQ9NQ29 371 aaKnown RBP5.25□□□□□ -1.57
SVIP-203ENST00000529848 DLL4Q9NR61 685 aa5.25□□□□□ -1.57
SVIP-203ENST00000529848 RBPJLQ9UBG7 517 aa5.25□□□□□ -1.57
SVIP-203ENST00000529848 MBD1Q9UIS9 605 aaPredicted RBP5.25□□□□□ -1.57
SVIP-203ENST00000529848 IRS2Q9Y4H2 1338 aa5.24□□□□□ -1.57
SVIP-203ENST00000529848 CARMIL2Q6F5E8 1435 aa5.24□□□□□ -1.57
SVIP-203ENST00000529848 TEX51A0A1B0GUA7 166 aa5.24□□□□□ -1.57
SVIP-203ENST00000529848 MAFGO15525 162 aa5.24□□□□□ -1.57
SVIP-203ENST00000529848 AKAP10O43572 662 aa5.24□□□□□ -1.57
SVIP-203ENST00000529848 XPOTO43592 962 aaKnown RBP5.24□□□□□ -1.57
SVIP-203ENST00000529848 SEMA7AO75326 666 aa5.24□□□□□ -1.57
SVIP-203ENST00000529848 H2AFYO75367 372 aaKnown RBP5.24□□□□□ -1.57
SVIP-203ENST00000529848 CT47B1P0C2W7 299 aaPredicted RBP5.24□□□□□ -1.57
SVIP-203ENST00000529848 CLEC2LP0C7M8 214 aa5.24□□□□□ -1.57
SVIP-203ENST00000529848 ENPP1P22413 925 aa5.24□□□□□ -1.57
SVIP-203ENST00000529848 GPR3P46089 330 aa5.24□□□□□ -1.57
SVIP-203ENST00000529848 RAB27AP51159 221 aa5.24□□□□□ -1.57
SVIP-203ENST00000529848 CDR1P51861 262 aa5.24□□□□□ -1.57
SVIP-203ENST00000529848 MANFP55145 182 aaKnown RBP5.24□□□□□ -1.57
SVIP-203ENST00000529848 ADCY2Q08462 1091 aa5.24□□□□□ -1.57
SVIP-203ENST00000529848 NFE2Q16621 373 aaPredicted RBP5.24□□□□□ -1.57
SVIP-203ENST00000529848 UGT8Q16880 541 aa5.24□□□□□ -1.57
SVIP-203ENST00000529848 CT83Q5H943 113 aa5.24□□□□□ -1.57
SVIP-203ENST00000529848 KIAA1841Q6NSI8 718 aa5.24□□□□□ -1.57
SVIP-203ENST00000529848 CCDC62Q6P9F0 684 aa5.24□□□□□ -1.57
SVIP-203ENST00000529848 LIPIQ6XZB0 460 aa5.24□□□□□ -1.57
SVIP-203ENST00000529848 MZB1Q8WU39 189 aa5.24□□□□□ -1.57
SVIP-203ENST00000529848 TGFBRAP1Q8WUH2 860 aa5.24□□□□□ -1.57
SVIP-203ENST00000529848 RPGRQ92834 1020 aaKnown RBP5.24□□□□□ -1.57
SVIP-203ENST00000529848 CCDC136Q96JN2 1154 aa5.24□□□□□ -1.57
SVIP-203ENST00000529848 WRNIP1Q96S55 665 aa5.24□□□□□ -1.57
SVIP-203ENST00000529848 SEMA4AQ9H3S1 761 aa5.24□□□□□ -1.57
SVIP-203ENST00000529848 CNTD2Q9H8S5 307 aa5.24□□□□□ -1.57
SVIP-203ENST00000529848 CCM2LQ9NUG4 571 aaPredicted RBP5.24□□□□□ -1.57
SVIP-203ENST00000529848 GALNT8Q9NY28 637 aa5.24□□□□□ -1.57
SVIP-203ENST00000529848 ZIM2Q9NZV7 527 aa5.24□□□□□ -1.57
SVIP-203ENST00000529848 ARHGAP20Q9P2F6 1191 aa5.24□□□□□ -1.57
SVIP-203ENST00000529848 LUC7L2Q9Y383 392 aaKnown RBP5.24□□□□□ -1.57
SVIP-203ENST00000529848 PCDHA5Q9Y5H7 936 aa5.24□□□□□ -1.57
SVIP-203ENST00000529848 PPP2R3BQ9Y5P8 575 aa5.24□□□□□ -1.57
SVIP-203ENST00000529848 MYOCOSA0A1B0GUC4 107 aa5.23□□□□□ -1.57
SVIP-203ENST00000529848 TRIM75PA6NK02 468 aa5.23□□□□□ -1.57
SVIP-203ENST00000529848 ELL2O00472 640 aaPredicted RBP5.23□□□□□ -1.57
SVIP-203ENST00000529848 NFIBO00712 420 aa5.23□□□□□ -1.57
SVIP-203ENST00000529848 MPIG6BO95866 241 aa5.23□□□□□ -1.57
SVIP-203ENST00000529848 RBP3P10745 1247 aa5.23□□□□□ -1.57
SVIP-203ENST00000529848 ATF2P15336 505 aa5.23□□□□□ -1.57
SVIP-203ENST00000529848 ECE1P42892 770 aa5.23□□□□□ -1.57
SVIP-203ENST00000529848 RECQLP46063 649 aaPredicted RBP5.23□□□□□ -1.57
SVIP-203ENST00000529848 GLRBP48167 497 aa5.23□□□□□ -1.57
SVIP-203ENST00000529848 RGS3P49796 1198 aa5.23□□□□□ -1.57
SVIP-203ENST00000529848 MYBPC3Q14896 1274 aa5.23□□□□□ -1.57
SVIP-203ENST00000529848 ACAP2Q15057 778 aa5.23□□□□□ -1.57
SVIP-203ENST00000529848 PCBP2Q15366 365 aaKnown RBP eCLIP5.23□□□□□ -1.57
SVIP-203ENST00000529848 FSCN1Q16658 493 aaKnown RBP5.23□□□□□ -1.57
SVIP-203ENST00000529848 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.23□□□□□ -1.57
SVIP-203ENST00000529848 ZBTB41Q5SVQ8 909 aa5.23□□□□□ -1.57
SVIP-203ENST00000529848 LRSAM1Q6UWE0 723 aa5.23□□□□□ -1.57
SVIP-203ENST00000529848 DPP8Q6V1X1 898 aaPredicted RBP5.23□□□□□ -1.57
SVIP-203ENST00000529848 NOL8Q76FK4 1167 aaKnown RBP5.23□□□□□ -1.57
SVIP-203ENST00000529848 B3GNT8Q7Z7M8 397 aa5.23□□□□□ -1.57
SVIP-203ENST00000529848 WDR75Q8IWA0 830 aaKnown RBP5.23□□□□□ -1.57
SVIP-203ENST00000529848 DTX3Q8N9I9 347 aa5.23□□□□□ -1.57
SVIP-203ENST00000529848 FBXO15Q8NCQ5 510 aaPredicted RBP5.23□□□□□ -1.57
SVIP-203ENST00000529848 CLIC6Q96NY7 704 aa5.23□□□□□ -1.57
SVIP-203ENST00000529848 AMNQ9BXJ7 453 aa5.23□□□□□ -1.57
SVIP-203ENST00000529848 QRSL1Q9H0R6 528 aaKnown RBP5.23□□□□□ -1.57
SVIP-203ENST00000529848 WNT8AQ9H1J5 351 aa5.23□□□□□ -1.57
SVIP-203ENST00000529848 DNAJC28Q9NX36 388 aa5.23□□□□□ -1.57
SVIP-203ENST00000529848 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.23□□□□□ -1.57
SVIP-203ENST00000529848 ZNF180Q9UJW8 692 aa5.23□□□□□ -1.57
SVIP-203ENST00000529848 INVSQ9Y283 1065 aa5.23□□□□□ -1.57
SVIP-203ENST00000529848 PRSS38A1L453 326 aa5.22□□□□□ -1.57
SVIP-203ENST00000529848 N4BP3O15049 544 aa5.22□□□□□ -1.57
SVIP-203ENST00000529848 TSPAN6O43657 245 aa5.22□□□□□ -1.57
SVIP-203ENST00000529848 SCGB1D2O95969 90 aa5.22□□□□□ -1.57
SVIP-203ENST00000529848 APEX1P27695 318 aaKnown RBP5.22□□□□□ -1.57
SVIP-203ENST00000529848 ITGA1P56199 1179 aa5.22□□□□□ -1.57
SVIP-203ENST00000529848 BCAR1P56945 870 aa5.22□□□□□ -1.57
SVIP-203ENST00000529848 KRT85P78386 507 aa5.22□□□□□ -1.57
SVIP-203ENST00000529848 FOXO4P98177 505 aa5.22□□□□□ -1.57
SVIP-203ENST00000529848 TOR2AQ5JU69 321 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms