RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 INPP4AQ96PE3 977 aaPredicted RBP4.07□□□□□ -1.76
PTPRC-213ENST00000529828 NEK1Q96PY6 1258 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 PPP1R16BQ96T49 567 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 UBAC1Q9BSL1 405 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 SENP2Q9HC62 589 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 ZSWIM5Q9P217 1185 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 MAD2L2Q9UI95 211 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 LRFN2Q9ULH4 789 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 GINS2Q9Y248 185 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 CACNA1BQ00975 2339 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 NRCAMQ92823 1304 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 CACNA1GO43497 2377 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 TPRP12270 2363 aaKnown RBP4.07□□□□□ -1.76
PTPRC-213ENST00000529828 CEP250Q9BV73 2442 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 MYH6P13533 1939 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 TBKBP1A7MCY6 615 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 HIDE1A8MVS5 230 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 SPATA31C2B4DYI2 1134 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 C2CD4DB7Z1M9 353 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 LCE2BO14633 110 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 FIBPO43427 364 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 MGEA5O60502 916 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 ATP9AO75110 1047 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 FGF18O76093 207 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 PCP11498 1178 aaKnown RBP4.06□□□□□ -1.76
PTPRC-213ENST00000529828 CA8P35219 290 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 ID4P47928 161 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 NFX1Q12986 1120 aaKnown RBP4.06□□□□□ -1.76
PTPRC-213ENST00000529828 PAK2Q13177 524 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 DUSP6Q16828 381 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 MARCH8Q5T0T0 291 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 FAM102BQ5T8I3 360 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 KANK3Q6NY19 840 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 TAF2Q6P1X5 1199 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 SYCE2Q6PIF2 218 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 USP17L6PQ6QN14 398 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 CWC27Q6UX04 472 aaKnown RBP4.06□□□□□ -1.76
PTPRC-213ENST00000529828 CYB5R4Q7L1T6 521 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 RSPH3Q86UC2 560 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 THNSL1Q8IYQ7 743 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 ADSSL1Q8N142 457 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 FLCNQ8NFG4 579 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 FEZF2Q8TBJ5 459 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 SUSD6Q92537 303 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 GLG1Q92896 1179 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 ZNF775Q96BV0 537 aaPredicted RBP4.06□□□□□ -1.76
PTPRC-213ENST00000529828 TMX1Q9H3N1 280 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 TMEM260Q9NX78 707 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 PADI3Q9ULW8 664 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 V9GY48 417 aaPredicted RBP4.06□□□□□ -1.76
PTPRC-213ENST00000529828 PLXNA4Q9HCM2 1894 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 TTC3P53804 2025 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 ASPMQ8IZT6 3477 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 GSTTP1A0A1W2PQM5 241 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 CYTH3O43739 400 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 FGFR1P11362 822 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 FOXK2Q01167 660 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 ANKRD54Q6NXT1 300 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 CRIPAKQ8N1N5 446 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 C12orf76Q8N812 135 aaPredicted RBP4.06□□□□□ -1.76
PTPRC-213ENST00000529828 COLGALT1Q8NBJ5 622 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 ATP8B4Q8TF62 1192 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 NKD2Q969F2 451 aaPredicted RBP4.06□□□□□ -1.76
PTPRC-213ENST00000529828 MTMR8Q96EF0 704 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 TCF25Q9BQ70 676 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 LNPKQ9C0E8 428 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 MAF1Q9H063 256 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 S1PR5Q9H228 398 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 MFSD1Q9H3U5 465 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 POMKQ9H5K3 350 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 ENTPD7Q9NQZ7 604 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 TYW1Q9NV66 732 aaKnown RBP4.06□□□□□ -1.76
PTPRC-213ENST00000529828 PCDHB12Q9Y5F1 795 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 TRPV2Q9Y5S1 764 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 BAZ2BQ9UIF8 2168 aaKnown RBP4.06□□□□□ -1.76
PTPRC-213ENST00000529828 CHD8Q9HCK8 2581 aa4.06□□□□□ -1.76
PTPRC-213ENST00000529828 ACACBO00763 2458 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 GPR179Q6PRD1 2367 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 FRMPD4Q14CM0 1322 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 MED19A0JLT2 244 aaPredicted RBP4.05□□□□□ -1.76
PTPRC-213ENST00000529828 MBLAC1A4D2B0 266 aaPredicted RBP4.05□□□□□ -1.76
PTPRC-213ENST00000529828 PALM3A6NDB9 673 aaPredicted RBP4.05□□□□□ -1.76
PTPRC-213ENST00000529828 PROB1E7EW31 1015 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 M0QZ92 97 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 STAG3L1P0CL83 205 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 INSRRP14616 1297 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 KCNA2P16389 499 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 ATF7P17544 494 aaPredicted RBP4.05□□□□□ -1.76
PTPRC-213ENST00000529828 SDSP20132 328 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 NBL1P41271 181 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 MTMR3Q13615 1198 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 PLCB4Q15147 1175 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 SEC23AQ15436 765 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 UBE2SQ16763 222 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 NAALADL2Q58DX5 795 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 CCDC178Q5BJE1 867 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 SMARCC2Q8TAQ2 1214 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 PCYT2Q99447 389 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 IRF2BPLQ9H1B7 796 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 IL25Q9H293 177 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms