RNA–Protein interactions for RNA: ENST00000529714.5

SMCO4-205, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 3

Gene SMCO4, Length 355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-205ENST00000529714 ZNF202O95125 648 aa15.21■□□□□ 0.03
SMCO4-205ENST00000529714 PLA2G4BP0C869 781 aa15.21■□□□□ 0.03
SMCO4-205ENST00000529714 INSRRP14616 1297 aa15.21■□□□□ 0.03
SMCO4-205ENST00000529714 LIG1P18858 919 aa15.21■□□□□ 0.03
SMCO4-205ENST00000529714 HOXC8P31273 242 aa15.21■□□□□ 0.03
SMCO4-205ENST00000529714 MNX1P50219 401 aaPredicted RBP15.21■□□□□ 0.03
SMCO4-205ENST00000529714 PTPN11Q06124 597 aaPredicted RBP15.21■□□□□ 0.03
SMCO4-205ENST00000529714 PPFIA1Q13136 1202 aa15.21■□□□□ 0.03
SMCO4-205ENST00000529714 XKR9Q5GH70 373 aa15.21■□□□□ 0.03
SMCO4-205ENST00000529714 COL13A1Q5TAT6 717 aaPredicted RBP15.21■□□□□ 0.03
SMCO4-205ENST00000529714 NFRKBQ6P4R8 1299 aa15.21■□□□□ 0.03
SMCO4-205ENST00000529714 EXOC8Q8IYI6 725 aa15.21■□□□□ 0.03
SMCO4-205ENST00000529714 CEP57L1Q8IYX8 460 aa15.21■□□□□ 0.03
SMCO4-205ENST00000529714 SYT2Q8N9I0 419 aaPredicted RBP15.21■□□□□ 0.03
SMCO4-205ENST00000529714 LRRC15Q8TF66 581 aa15.21■□□□□ 0.03
SMCO4-205ENST00000529714 CCDC34Q96HJ3 373 aa15.21■□□□□ 0.03
SMCO4-205ENST00000529714 PLIN2Q99541 437 aa15.21■□□□□ 0.03
SMCO4-205ENST00000529714 BHMT2Q9H2M3 363 aa15.21■□□□□ 0.03
SMCO4-205ENST00000529714 TNMDQ9H2S6 317 aa15.21■□□□□ 0.03
SMCO4-205ENST00000529714 CYP26B1Q9NR63 512 aa15.21■□□□□ 0.03
SMCO4-205ENST00000529714 KCND2Q9NZV8 630 aa15.21■□□□□ 0.03
SMCO4-205ENST00000529714 ZBTB42B2RXF5 422 aa15.2■□□□□ 0.02
SMCO4-205ENST00000529714 ZBTB39O15060 712 aa15.2■□□□□ 0.02
SMCO4-205ENST00000529714 KINO60870 393 aaKnown RBP15.2■□□□□ 0.02
SMCO4-205ENST00000529714 NR1I2O75469 434 aa15.2■□□□□ 0.02
SMCO4-205ENST00000529714 SMIM10L2AP0DMW4 78 aa15.2■□□□□ 0.02
SMCO4-205ENST00000529714 SMIM10L2BP0DMW5 78 aa15.2■□□□□ 0.02
SMCO4-205ENST00000529714 GNAT1P11488 350 aa15.2■□□□□ 0.02
SMCO4-205ENST00000529714 COL6A1P12109 1028 aa15.2■□□□□ 0.02
SMCO4-205ENST00000529714 RFC5P40937 340 aa15.2■□□□□ 0.02
SMCO4-205ENST00000529714 SLC12A3P55017 1021 aa15.2■□□□□ 0.02
SMCO4-205ENST00000529714 NBPF20Q3BBV1 942 aa15.2■□□□□ 0.02
SMCO4-205ENST00000529714 LONRF3Q496Y0 759 aa15.2■□□□□ 0.02
SMCO4-205ENST00000529714 TPRNQ4KMQ1 711 aa15.2■□□□□ 0.02
SMCO4-205ENST00000529714 PLA2G4FQ68DD2 849 aa15.2■□□□□ 0.02
SMCO4-205ENST00000529714 KANK3Q6NY19 840 aa15.2■□□□□ 0.02
SMCO4-205ENST00000529714 KRBA2Q6ZNG9 492 aa15.2■□□□□ 0.02
SMCO4-205ENST00000529714 SV2BQ7L1I2 683 aa15.2■□□□□ 0.02
SMCO4-205ENST00000529714 ELOA2Q8IYF1 753 aaPredicted RBP15.2■□□□□ 0.02
SMCO4-205ENST00000529714 C7orf31Q8N865 590 aa15.2■□□□□ 0.02
SMCO4-205ENST00000529714 SLC43A3Q8NBI5 491 aa15.2■□□□□ 0.02
SMCO4-205ENST00000529714 CEP170P1Q96L14 293 aa15.2■□□□□ 0.02
SMCO4-205ENST00000529714 CEP89Q96ST8 783 aa15.2■□□□□ 0.02
SMCO4-205ENST00000529714 JPH2Q9BR39 696 aaPredicted RBP15.2■□□□□ 0.02
SMCO4-205ENST00000529714 LRRC27Q9C0I9 530 aa15.2■□□□□ 0.02
SMCO4-205ENST00000529714 STARD7Q9NQZ5 370 aa15.2■□□□□ 0.02
SMCO4-205ENST00000529714 KBTBD4Q9NVX7 518 aa15.2■□□□□ 0.02
SMCO4-205ENST00000529714 KAT6AQ92794 2004 aa15.2■□□□□ 0.02
SMCO4-205ENST00000529714 KIAA0100Q14667 2235 aaKnown RBP15.2■□□□□ 0.02
SMCO4-205ENST00000529714 GRIN2DO15399 1336 aa15.19■□□□□ 0.02
SMCO4-205ENST00000529714 A0A0U1RQG5 324 aaPredicted RBP15.19■□□□□ 0.02
SMCO4-205ENST00000529714 TMEM150BA6NC51 233 aa15.19■□□□□ 0.02
SMCO4-205ENST00000529714 MAGEB2O15479 319 aa15.19■□□□□ 0.02
SMCO4-205ENST00000529714 GAS2O43903 313 aaKnown RBP15.19■□□□□ 0.02
SMCO4-205ENST00000529714 DGAT1O75907 488 aa15.19■□□□□ 0.02
SMCO4-205ENST00000529714 MYL1P05976 194 aa15.19■□□□□ 0.02
SMCO4-205ENST00000529714 NPEPPSP55786 919 aa15.19■□□□□ 0.02
SMCO4-205ENST00000529714 AMPD3Q01432 767 aa15.19■□□□□ 0.02
SMCO4-205ENST00000529714 ITGA7Q13683 1181 aa15.19■□□□□ 0.02
SMCO4-205ENST00000529714 GRIK4Q16099 956 aa15.19■□□□□ 0.02
SMCO4-205ENST00000529714 MTERF2Q49AM1 385 aa15.19■□□□□ 0.02
SMCO4-205ENST00000529714 CNNM3Q8NE01 707 aa15.19■□□□□ 0.02
SMCO4-205ENST00000529714 TIPINQ9BVW5 301 aa15.19■□□□□ 0.02
SMCO4-205ENST00000529714 DHX33Q9H6R0 707 aaKnown RBP15.19■□□□□ 0.02
SMCO4-205ENST00000529714 HDAC6Q9UBN7 1215 aa15.19■□□□□ 0.02
SMCO4-205ENST00000529714 GTF2IRD1Q9UHL9 959 aa15.19■□□□□ 0.02
SMCO4-205ENST00000529714 SERTAD1Q9UHV2 236 aa15.19■□□□□ 0.02
SMCO4-205ENST00000529714 A0A087WWV3 80 aa15.18■□□□□ 0.02
SMCO4-205ENST00000529714 MBLAC1A4D2B0 266 aaPredicted RBP15.18■□□□□ 0.02
SMCO4-205ENST00000529714 MAFO75444 373 aaPredicted RBP15.18■□□□□ 0.02
SMCO4-205ENST00000529714 ADAM17P78536 824 aa15.18■□□□□ 0.02
SMCO4-205ENST00000529714 TBC1D8BQ0IIM8 1120 aa15.18■□□□□ 0.02
SMCO4-205ENST00000529714 MCM6Q14566 821 aa15.18■□□□□ 0.02
SMCO4-205ENST00000529714 C1orf53Q5VUE5 145 aa15.18■□□□□ 0.02
SMCO4-205ENST00000529714 CNNM4Q6P4Q7 775 aa15.18■□□□□ 0.02
SMCO4-205ENST00000529714 PADI6Q6TGC4 694 aa15.18■□□□□ 0.02
SMCO4-205ENST00000529714 TRMT1LQ7Z2T5 733 aaKnown RBP15.18■□□□□ 0.02
SMCO4-205ENST00000529714 SH3RF1Q7Z6J0 888 aa15.18■□□□□ 0.02
SMCO4-205ENST00000529714 MCPH1Q8NEM0 835 aa15.18■□□□□ 0.02
SMCO4-205ENST00000529714 GPT2Q8TD30 523 aa15.18■□□□□ 0.02
SMCO4-205ENST00000529714 LMBR1Q8WVP7 490 aa15.18■□□□□ 0.02
SMCO4-205ENST00000529714 SLC7A3Q8WY07 619 aa15.18■□□□□ 0.02
SMCO4-205ENST00000529714 VTI1AQ96AJ9 217 aa15.18■□□□□ 0.02
SMCO4-205ENST00000529714 DACT1Q9NYF0 836 aa15.18■□□□□ 0.02
SMCO4-205ENST00000529714 HOOK1Q9UJC3 728 aaKnown RBP15.18■□□□□ 0.02
SMCO4-205ENST00000529714 IGKV6-21A0A0C4DH24 114 aa15.17■□□□□ 0.02
SMCO4-205ENST00000529714 C17orf102A2RUQ5 167 aa15.17■□□□□ 0.02
SMCO4-205ENST00000529714 ARVCFO00192 962 aa15.17■□□□□ 0.02
SMCO4-205ENST00000529714 C22orf31O95567 290 aa15.17■□□□□ 0.02
SMCO4-205ENST00000529714 SSBP05455 408 aaKnown RBP eCLIP15.17■□□□□ 0.02
SMCO4-205ENST00000529714 CYP11B2P19099 503 aa15.17■□□□□ 0.02
SMCO4-205ENST00000529714 GUCY2CP25092 1073 aa15.17■□□□□ 0.02
SMCO4-205ENST00000529714 CDK7P50613 346 aa15.17■□□□□ 0.02
SMCO4-205ENST00000529714 POLGP54098 1239 aaPredicted RBP15.17■□□□□ 0.02
SMCO4-205ENST00000529714 CHMP4BP1P59074 171 aa15.17■□□□□ 0.02
SMCO4-205ENST00000529714 NFKBIBQ15653 356 aa15.17■□□□□ 0.02
SMCO4-205ENST00000529714 MARCH8Q5T0T0 291 aa15.17■□□□□ 0.02
SMCO4-205ENST00000529714 RINT1Q6NUQ1 792 aa15.17■□□□□ 0.02
SMCO4-205ENST00000529714 C1orf186Q6ZWK4 172 aa15.17■□□□□ 0.02
SMCO4-205ENST00000529714 NECAB2Q7Z6G3 386 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms