RNA–Protein interactions for RNA: ENST00000529371.5

LTBP3-213, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-213ENST00000529371 HIPK3Q9H422 1215 aa27.82■■■□□ 2.04
LTBP3-213ENST00000529371 TBX21Q9UL17 535 aa27.82■■■□□ 2.04
LTBP3-213ENST00000529371 PPME1Q9Y570 386 aa27.82■■■□□ 2.04
LTBP3-213ENST00000529371 MBLAC1A4D2B0 266 aaPredicted RBP27.81■■■□□ 2.04
LTBP3-213ENST00000529371 TMEM150BA6NC51 233 aa27.81■■■□□ 2.04
LTBP3-213ENST00000529371 MAGEB2O15479 319 aa27.81■■■□□ 2.04
LTBP3-213ENST00000529371 STBD1O95210 358 aa27.81■■■□□ 2.04
LTBP3-213ENST00000529371 RAG1P15918 1043 aa27.81■■■□□ 2.04
LTBP3-213ENST00000529371 KLRC1P26715 233 aa27.81■■■□□ 2.04
LTBP3-213ENST00000529371 ADAM17P78536 824 aa27.81■■■□□ 2.04
LTBP3-213ENST00000529371 MTHFD1LQ6UB35 978 aa27.81■■■□□ 2.04
LTBP3-213ENST00000529371 RSPH3Q86UC2 560 aa27.81■■■□□ 2.04
LTBP3-213ENST00000529371 CAGE1Q8TC20 777 aa27.81■■■□□ 2.04
LTBP3-213ENST00000529371 CLIC6Q96NY7 704 aa27.81■■■□□ 2.04
LTBP3-213ENST00000529371 CYP26B1Q9NR63 512 aa27.81■■■□□ 2.04
LTBP3-213ENST00000529371 ANKEF1Q9NU02 776 aa27.81■■■□□ 2.04
LTBP3-213ENST00000529371 ZMYND8Q9ULU4 1186 aaPredicted RBP27.81■■■□□ 2.04
LTBP3-213ENST00000529371 KIAA1024Q9UPX6 916 aa27.81■■■□□ 2.04
LTBP3-213ENST00000529371 KIAA0355O15063 1070 aa27.8■■■□□ 2.04
LTBP3-213ENST00000529371 RPLP2P05387 115 aaKnown RBP27.8■■■□□ 2.04
LTBP3-213ENST00000529371 XRCC6P12956 609 aaKnown RBP eCLIP27.8■■■□□ 2.04
LTBP3-213ENST00000529371 MARCH8Q5T0T0 291 aa27.8■■■□□ 2.04
LTBP3-213ENST00000529371 RETREG2Q8NC44 543 aa27.8■■■□□ 2.04
LTBP3-213ENST00000529371 PIGOQ8TEQ8 1089 aa27.8■■■□□ 2.04
LTBP3-213ENST00000529371 JPH2Q9BR39 696 aaPredicted RBP27.8■■■□□ 2.04
LTBP3-213ENST00000529371 PPP1R12CQ9BZL4 782 aa27.8■■■□□ 2.04
LTBP3-213ENST00000529371 DDX19AQ9NUU7 478 aaKnown RBP27.8■■■□□ 2.04
LTBP3-213ENST00000529371 RCOR1Q9UKL0 485 aa27.8■■■□□ 2.04
LTBP3-213ENST00000529371 ZBTB42B2RXF5 422 aa27.79■■■□□ 2.04
LTBP3-213ENST00000529371 CUTAO60888 179 aa27.79■■■□□ 2.04
LTBP3-213ENST00000529371 SYN1P17600 705 aa27.79■■■□□ 2.04
LTBP3-213ENST00000529371 SH3RF1Q7Z6J0 888 aa27.79■■■□□ 2.04
LTBP3-213ENST00000529371 EXOC8Q8IYI6 725 aa27.79■■■□□ 2.04
LTBP3-213ENST00000529371 METTL13Q8N6R0 699 aa27.79■■■□□ 2.04
LTBP3-213ENST00000529371 LEO1Q8WVC0 666 aaPredicted RBP27.79■■■□□ 2.04
LTBP3-213ENST00000529371 MMTAG2Q9BU76 263 aaKnown RBP27.79■■■□□ 2.04
LTBP3-213ENST00000529371 CCDC39Q9UFE4 941 aa27.79■■■□□ 2.04
LTBP3-213ENST00000529371 PCDHA2Q9Y5H9 948 aa27.79■■■□□ 2.04
LTBP3-213ENST00000529371 TRIP12Q14669 1992 aaPredicted RBP27.79■■■□□ 2.04
LTBP3-213ENST00000529371 C22orf31O95567 290 aa27.78■■■□□ 2.04
LTBP3-213ENST00000529371 TMOD1P28289 359 aa27.78■■■□□ 2.04
LTBP3-213ENST00000529371 RFC5P40937 340 aa27.78■■■□□ 2.04
LTBP3-213ENST00000529371 POLGP54098 1239 aaPredicted RBP27.78■■■□□ 2.04
LTBP3-213ENST00000529371 NPEPPSP55786 919 aa27.78■■■□□ 2.04
LTBP3-213ENST00000529371 TARBP2Q15633 366 aaKnown RBP27.78■■■□□ 2.04
LTBP3-213ENST00000529371 SPECC1Q5M775 1068 aa27.78■■■□□ 2.04
LTBP3-213ENST00000529371 SLC7A3Q8WY07 619 aa27.78■■■□□ 2.04
LTBP3-213ENST00000529371 SYMPKQ92797 1274 aaKnown RBP27.78■■■□□ 2.04
LTBP3-213ENST00000529371 CHAMP1Q96JM3 812 aa27.78■■■□□ 2.04
LTBP3-213ENST00000529371 CTAGE1Q96RT6 745 aa27.78■■■□□ 2.04
LTBP3-213ENST00000529371 SH2D3AQ9BRG2 576 aa27.78■■■□□ 2.04
LTBP3-213ENST00000529371 NOC4LQ9BVI4 516 aaKnown RBP27.78■■■□□ 2.04
LTBP3-213ENST00000529371 FAM49AQ9H0Q0 323 aaPredicted RBP27.78■■■□□ 2.04
LTBP3-213ENST00000529371 DBR1Q9UK59 544 aaKnown RBP27.78■■■□□ 2.04
LTBP3-213ENST00000529371 DNM3Q9UQ16 869 aa27.78■■■□□ 2.04
LTBP3-213ENST00000529371 SMIM35A0A1B0GVV1 85 aa27.77■■■□□ 2.04
LTBP3-213ENST00000529371 ARHGEF35A5YM69 484 aa27.77■■■□□ 2.04
LTBP3-213ENST00000529371 TRIM43BA6NCK2 446 aa27.77■■■□□ 2.04
LTBP3-213ENST00000529371 PITPNM1O00562 1244 aa27.77■■■□□ 2.04
LTBP3-213ENST00000529371 THPOP40225 353 aa27.77■■■□□ 2.04
LTBP3-213ENST00000529371 RUFY4Q6ZNE9 571 aa27.77■■■□□ 2.04
LTBP3-213ENST00000529371 KCTD17Q8N5Z5 321 aa27.77■■■□□ 2.04
LTBP3-213ENST00000529371 ZNF579Q8NAF0 562 aaKnown RBP27.77■■■□□ 2.04
LTBP3-213ENST00000529371 TRIM43Q96BQ3 446 aaPredicted RBP27.77■■■□□ 2.04
LTBP3-213ENST00000529371 MAP7D2Q96T17 732 aa27.77■■■□□ 2.04
LTBP3-213ENST00000529371 LBHD1Q9BQE6 289 aaPredicted RBP27.77■■■□□ 2.04
LTBP3-213ENST00000529371 CCSER1Q9C0I3 900 aa27.77■■■□□ 2.04
LTBP3-213ENST00000529371 ZBTB39O15060 712 aa27.76■■■□□ 2.03
LTBP3-213ENST00000529371 CAND2O75155 1236 aa27.76■■■□□ 2.03
LTBP3-213ENST00000529371 RARRES1P49788 294 aa27.76■■■□□ 2.03
LTBP3-213ENST00000529371 ECM1Q16610 540 aa27.76■■■□□ 2.03
LTBP3-213ENST00000529371 HYIQ5T013 277 aa27.76■■■□□ 2.03
LTBP3-213ENST00000529371 DNAJB3Q8WWF6 145 aa27.76■■■□□ 2.03
LTBP3-213ENST00000529371 DHX38Q92620 1227 aaKnown RBP27.76■■■□□ 2.03
LTBP3-213ENST00000529371 ZBTB10Q96DT7 871 aa27.76■■■□□ 2.03
LTBP3-213ENST00000529371 EPSTI1Q96J88 318 aa27.76■■■□□ 2.03
LTBP3-213ENST00000529371 PLIN2Q99541 437 aa27.76■■■□□ 2.03
LTBP3-213ENST00000529371 SUGCTQ9HAC7 445 aa27.76■■■□□ 2.03
LTBP3-213ENST00000529371 A0A087WWV3 80 aa27.75■■■□□ 2.03
LTBP3-213ENST00000529371 M0QZ92 97 aa27.75■■■□□ 2.03
LTBP3-213ENST00000529371 TIMP1P01033 207 aa27.75■■■□□ 2.03
LTBP3-213ENST00000529371 DNM2P50570 870 aa27.75■■■□□ 2.03
LTBP3-213ENST00000529371 EFCAB12Q6NXP0 572 aa27.75■■■□□ 2.03
LTBP3-213ENST00000529371 PCDHA7Q9UN72 937 aa27.75■■■□□ 2.03
LTBP3-213ENST00000529371 MAFO75444 373 aaPredicted RBP27.74■■■□□ 2.03
LTBP3-213ENST00000529371 SELPP16109 830 aa27.74■■■□□ 2.03
LTBP3-213ENST00000529371 CYP2C18P33260 490 aa27.74■■■□□ 2.03
LTBP3-213ENST00000529371 RBL2Q08999 1139 aa27.74■■■□□ 2.03
LTBP3-213ENST00000529371 GRB10Q13322 594 aa27.74■■■□□ 2.03
LTBP3-213ENST00000529371 KARSQ15046 597 aaKnown RBP27.74■■■□□ 2.03
LTBP3-213ENST00000529371 TMEM119Q4V9L6 283 aa27.74■■■□□ 2.03
LTBP3-213ENST00000529371 LRRC71Q8N4P6 559 aa27.74■■■□□ 2.03
LTBP3-213ENST00000529371 WNT8BQ93098 351 aa27.74■■■□□ 2.03
LTBP3-213ENST00000529371 PNMA5Q96PV4 448 aa27.74■■■□□ 2.03
LTBP3-213ENST00000529371 GAS2O43903 313 aaKnown RBP27.73■■■□□ 2.03
LTBP3-213ENST00000529371 USO1O60763 962 aaKnown RBP27.73■■■□□ 2.03
LTBP3-213ENST00000529371 DGAT1O75907 488 aa27.73■■■□□ 2.03
LTBP3-213ENST00000529371 EYA4O95677 639 aa27.73■■■□□ 2.03
LTBP3-213ENST00000529371 CKBP12277 381 aa27.73■■■□□ 2.03
LTBP3-213ENST00000529371 CLCN3P51790 818 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms