RNA–Protein interactions for RNA: ENST00000528999.5

PUF60-213, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-213ENST00000528999 TRIM10Q9UDY6 481 aa11.74□□□□□ -0.53
PUF60-213ENST00000528999 ZNF536O15090 1300 aa11.74□□□□□ -0.53
PUF60-213ENST00000528999 ARHGEF35A5YM69 484 aa11.73□□□□□ -0.53
PUF60-213ENST00000528999 ASTN1O14525 1302 aa11.73□□□□□ -0.53
PUF60-213ENST00000528999 NKRFO15226 690 aaKnown RBP eCLIP11.73□□□□□ -0.53
PUF60-213ENST00000528999 MAPK13O15264 365 aa11.73□□□□□ -0.53
PUF60-213ENST00000528999 TGFB1I1O43294 461 aa11.73□□□□□ -0.53
PUF60-213ENST00000528999 DKC1O60832 514 aaKnown RBP eCLIP11.73□□□□□ -0.53
PUF60-213ENST00000528999 EIF3JO75822 258 aaKnown RBP11.73□□□□□ -0.53
PUF60-213ENST00000528999 TBC1D8O95759 1140 aa11.73□□□□□ -0.53
PUF60-213ENST00000528999 ARP10275 920 aa11.73□□□□□ -0.53
PUF60-213ENST00000528999 RFX1P22670 979 aa11.73□□□□□ -0.53
PUF60-213ENST00000528999 PON1P27169 355 aa11.73□□□□□ -0.53
PUF60-213ENST00000528999 POLD1P28340 1107 aa11.73□□□□□ -0.53
PUF60-213ENST00000528999 SFNP31947 248 aa11.73□□□□□ -0.53
PUF60-213ENST00000528999 PLA2G4AP47712 749 aa11.73□□□□□ -0.53
PUF60-213ENST00000528999 CASP5P51878 434 aa11.73□□□□□ -0.53
PUF60-213ENST00000528999 OAZ1P54368 228 aa11.73□□□□□ -0.53
PUF60-213ENST00000528999 CYP4A11Q02928 519 aa11.73□□□□□ -0.53
PUF60-213ENST00000528999 DMTNQ08495 405 aa11.73□□□□□ -0.53
PUF60-213ENST00000528999 KLHL30Q0D2K2 578 aa11.73□□□□□ -0.53
PUF60-213ENST00000528999 CTTNQ14247 550 aaKnown RBP11.73□□□□□ -0.53
PUF60-213ENST00000528999 NBPF9Q3BBW0 867 aa11.73□□□□□ -0.53
PUF60-213ENST00000528999 GLE1Q53GS7 698 aaKnown RBP11.73□□□□□ -0.53
PUF60-213ENST00000528999 BEND6Q5SZJ8 279 aaPredicted RBP11.73□□□□□ -0.53
PUF60-213ENST00000528999 IRF2BP2Q7Z5L9 587 aa11.73□□□□□ -0.53
PUF60-213ENST00000528999 VPS36Q86VN1 386 aa11.73□□□□□ -0.53
PUF60-213ENST00000528999 FAM178BQ8IXR5 827 aa11.73□□□□□ -0.53
PUF60-213ENST00000528999 ATAD5Q96QE3 1844 aa11.73□□□□□ -0.53
PUF60-213ENST00000528999 VIPAS39Q9H9C1 493 aa11.73□□□□□ -0.53
PUF60-213ENST00000528999 AS3MTQ9HBK9 375 aa11.73□□□□□ -0.53
PUF60-213ENST00000528999 AGO4Q9HCK5 861 aaKnown RBP11.73□□□□□ -0.53
PUF60-213ENST00000528999 LARSQ9P2J5 1176 aaKnown RBP11.73□□□□□ -0.53
PUF60-213ENST00000528999 KCNG1Q9UIX4 513 aa11.73□□□□□ -0.53
PUF60-213ENST00000528999 ZNF112Q9UJU3 913 aa11.73□□□□□ -0.53
PUF60-213ENST00000528999 PPP1R9AQ9ULJ8 1098 aa11.73□□□□□ -0.53
PUF60-213ENST00000528999 L1RE1Q9UN81 338 aa11.73□□□□□ -0.53
PUF60-213ENST00000528999 FRMD4BQ9Y2L6 1034 aa11.73□□□□□ -0.53
PUF60-213ENST00000528999 HYOU1Q9Y4L1 999 aa11.73□□□□□ -0.53
PUF60-213ENST00000528999 PMM2O15305 246 aa11.72□□□□□ -0.53
PUF60-213ENST00000528999 P4HA2O15460 535 aa11.72□□□□□ -0.53
PUF60-213ENST00000528999 DHX15O43143 795 aaKnown RBP11.72□□□□□ -0.53
PUF60-213ENST00000528999 TLR2O60603 784 aa11.72□□□□□ -0.53
PUF60-213ENST00000528999 AKAP3O75969 853 aa11.72□□□□□ -0.53
PUF60-213ENST00000528999 PLEKP08567 350 aaPredicted RBP11.72□□□□□ -0.53
PUF60-213ENST00000528999 UCHL3P15374 230 aa11.72□□□□□ -0.53
PUF60-213ENST00000528999 FERP16591 822 aa11.72□□□□□ -0.53
PUF60-213ENST00000528999 ITGB5P18084 799 aa11.72□□□□□ -0.53
PUF60-213ENST00000528999 ABCD1P33897 745 aa11.72□□□□□ -0.53
PUF60-213ENST00000528999 PAFAH1B1P43034 410 aa11.72□□□□□ -0.53
PUF60-213ENST00000528999 QARSP47897 775 aaKnown RBP11.72□□□□□ -0.53
PUF60-213ENST00000528999 CACNB1Q02641 598 aaPredicted RBP11.72□□□□□ -0.53
PUF60-213ENST00000528999 ENPEPQ07075 957 aa11.72□□□□□ -0.53
PUF60-213ENST00000528999 RAD51AP2Q09MP3 1159 aa11.72□□□□□ -0.53
PUF60-213ENST00000528999 TKFCQ3LXA3 575 aa11.72□□□□□ -0.53
PUF60-213ENST00000528999 MIER3Q7Z3K6 550 aa11.72□□□□□ -0.53
PUF60-213ENST00000528999 C4orf19Q8IY42 314 aa11.72□□□□□ -0.53
PUF60-213ENST00000528999 FAM186BQ8IYM0 893 aa11.72□□□□□ -0.53
PUF60-213ENST00000528999 SYTL5Q8TDW5 730 aaPredicted RBP11.72□□□□□ -0.53
PUF60-213ENST00000528999 LMBR1Q8WVP7 490 aa11.72□□□□□ -0.53
PUF60-213ENST00000528999 SLC35C1Q96A29 364 aa11.72□□□□□ -0.53
PUF60-213ENST00000528999 AGBL1Q96MI9 1066 aa11.72□□□□□ -0.53
PUF60-213ENST00000528999 SENP7Q9BQF6 1050 aa11.72□□□□□ -0.53
PUF60-213ENST00000528999 NLRC4Q9NPP4 1024 aa11.72□□□□□ -0.53
PUF60-213ENST00000528999 KCNH7Q9NS40 1196 aa11.72□□□□□ -0.53
PUF60-213ENST00000528999 ANKEF1Q9NU02 776 aa11.72□□□□□ -0.53
PUF60-213ENST00000528999 CTDP1Q9Y5B0 961 aaPredicted RBP11.72□□□□□ -0.53
PUF60-213ENST00000528999 COL4A5P29400 1685 aa11.71□□□□□ -0.53
PUF60-213ENST00000528999 EP400Q96L91 3159 aa11.71□□□□□ -0.53
PUF60-213ENST00000528999 A0A0A6YYK5 440 aaPredicted RBP11.71□□□□□ -0.53
PUF60-213ENST00000528999 MACROD2A1Z1Q3 448 aa11.71□□□□□ -0.53
PUF60-213ENST00000528999 GRID2IPA4D2P6 1211 aa11.71□□□□□ -0.53
PUF60-213ENST00000528999 C19orf81C9J6K1 198 aa11.71□□□□□ -0.53
PUF60-213ENST00000528999 N4BP1O75113 896 aaKnown RBP11.71□□□□□ -0.53
PUF60-213ENST00000528999 PPP1R37O75864 691 aa11.71□□□□□ -0.53
PUF60-213ENST00000528999 STAM2O75886 525 aa11.71□□□□□ -0.53
PUF60-213ENST00000528999 CLSTN1O94985 981 aa11.71□□□□□ -0.53
PUF60-213ENST00000528999 SCP2P22307 547 aa11.71□□□□□ -0.53
PUF60-213ENST00000528999 JAK3P52333 1124 aa11.71□□□□□ -0.53
PUF60-213ENST00000528999 NPEPPSP55786 919 aa11.71□□□□□ -0.53
PUF60-213ENST00000528999 JAM2P57087 298 aa11.71□□□□□ -0.53
PUF60-213ENST00000528999 KRT76Q01546 638 aa11.71□□□□□ -0.53
PUF60-213ENST00000528999 TERF2Q15554 542 aa11.71□□□□□ -0.53
PUF60-213ENST00000528999 TDRD12Q587J7 1177 aaKnown RBP11.71□□□□□ -0.53
PUF60-213ENST00000528999 PADI6Q6TGC4 694 aa11.71□□□□□ -0.53
PUF60-213ENST00000528999 CREG2Q8IUH2 290 aa11.71□□□□□ -0.53
PUF60-213ENST00000528999 PIGOQ8TEQ8 1089 aa11.71□□□□□ -0.53
PUF60-213ENST00000528999 HVCN1Q96D96 273 aa11.71□□□□□ -0.53
PUF60-213ENST00000528999 C12orf42Q96LP6 360 aa11.71□□□□□ -0.53
PUF60-213ENST00000528999 SPAG5Q96R06 1193 aa11.71□□□□□ -0.53
PUF60-213ENST00000528999 FIZ1Q96SL8 496 aa11.71□□□□□ -0.53
PUF60-213ENST00000528999 MMS19Q96T76 1030 aa11.71□□□□□ -0.53
PUF60-213ENST00000528999 LXNQ9BS40 222 aa11.71□□□□□ -0.53
PUF60-213ENST00000528999 STK33Q9BYT3 514 aa11.71□□□□□ -0.53
PUF60-213ENST00000528999 FBXO28Q9NVF7 368 aa11.71□□□□□ -0.53
PUF60-213ENST00000528999 USP20Q9Y2K6 914 aa11.71□□□□□ -0.53
PUF60-213ENST00000528999 PCDHGC5Q9Y5F6 944 aa11.71□□□□□ -0.53
PUF60-213ENST00000528999 CD2APQ9Y5K6 639 aa11.71□□□□□ -0.53
PUF60-213ENST00000528999 DUSP10Q9Y6W6 482 aa11.71□□□□□ -0.53
PUF60-213ENST00000528999 RSPH10B2B2RC85 870 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 241 ms