RNA–Protein interactions for RNA: ENST00000528907.5

UBXN1-209, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 861 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-209ENST00000528907 SYMPKQ92797 1274 aaKnown RBP16.09■□□□□ 0.17
UBXN1-209ENST00000528907 CALML4Q96GE6 196 aa16.09■□□□□ 0.17
UBXN1-209ENST00000528907 EPSTI1Q96J88 318 aa16.09■□□□□ 0.17
UBXN1-209ENST00000528907 HTATIP2Q9BUP3 242 aa16.09■□□□□ 0.17
UBXN1-209ENST00000528907 CCDC39Q9UFE4 941 aa16.09■□□□□ 0.17
UBXN1-209ENST00000528907 TRPC6Q9Y210 931 aa16.09■□□□□ 0.17
UBXN1-209ENST00000528907 TLR3O15455 904 aaKnown RBP16.08■□□□□ 0.16
UBXN1-209ENST00000528907 MAGEB2O15479 319 aa16.08■□□□□ 0.16
UBXN1-209ENST00000528907 RARRES1P49788 294 aa16.08■□□□□ 0.16
UBXN1-209ENST00000528907 HIC1Q14526 733 aa16.08■□□□□ 0.16
UBXN1-209ENST00000528907 LRRC26Q2I0M4 334 aa16.08■□□□□ 0.16
UBXN1-209ENST00000528907 GDF6Q6KF10 455 aaPredicted RBP16.08■□□□□ 0.16
UBXN1-209ENST00000528907 POTEGQ6S5H5 508 aa16.08■□□□□ 0.16
UBXN1-209ENST00000528907 USP49Q70CQ1 688 aa16.08■□□□□ 0.16
UBXN1-209ENST00000528907 RPAINQ86UA6 219 aa16.08■□□□□ 0.16
UBXN1-209ENST00000528907 CTAGE1Q96RT6 745 aa16.08■□□□□ 0.16
UBXN1-209ENST00000528907 PYM1Q9BRP8 204 aaKnown RBP16.08■□□□□ 0.16
UBXN1-209ENST00000528907 CYP26B1Q9NR63 512 aa16.08■□□□□ 0.16
UBXN1-209ENST00000528907 DDX19AQ9NUU7 478 aaKnown RBP16.08■□□□□ 0.16
UBXN1-209ENST00000528907 SEPT9Q9UHD8 586 aaPredicted RBP16.08■□□□□ 0.16
UBXN1-209ENST00000528907 KIAA1024Q9UPX6 916 aa16.08■□□□□ 0.16
UBXN1-209ENST00000528907 IGKV6-21A0A0C4DH24 114 aa16.07■□□□□ 0.16
UBXN1-209ENST00000528907 DDX11L8A8MPP1 907 aa16.07■□□□□ 0.16
UBXN1-209ENST00000528907 EYA4O95677 639 aa16.07■□□□□ 0.16
UBXN1-209ENST00000528907 RFC5P40937 340 aa16.07■□□□□ 0.16
UBXN1-209ENST00000528907 RTP1P59025 263 aa16.07■□□□□ 0.16
UBXN1-209ENST00000528907 RBL2Q08999 1139 aa16.07■□□□□ 0.16
UBXN1-209ENST00000528907 PTK7Q13308 1070 aa16.07■□□□□ 0.16
UBXN1-209ENST00000528907 TRIM60Q495X7 471 aa16.07■□□□□ 0.16
UBXN1-209ENST00000528907 SPECC1Q5M775 1068 aa16.07■□□□□ 0.16
UBXN1-209ENST00000528907 CHRDL2Q6WN34 429 aa16.07■□□□□ 0.16
UBXN1-209ENST00000528907 SERINC5Q86VE9 423 aa16.07■□□□□ 0.16
UBXN1-209ENST00000528907 JPH2Q9BR39 696 aaPredicted RBP16.07■□□□□ 0.16
UBXN1-209ENST00000528907 DHX33Q9H6R0 707 aaKnown RBP16.07■□□□□ 0.16
UBXN1-209ENST00000528907 SETD4Q9NVD3 440 aa16.07■□□□□ 0.16
UBXN1-209ENST00000528907 FAM13BQ9NYF5 915 aa16.07■□□□□ 0.16
UBXN1-209ENST00000528907 STK17AQ9UEE5 414 aa16.07■□□□□ 0.16
UBXN1-209ENST00000528907 DNM3Q9UQ16 869 aa16.07■□□□□ 0.16
UBXN1-209ENST00000528907 HPSEQ9Y251 543 aa16.07■□□□□ 0.16
UBXN1-209ENST00000528907 PCDHA2Q9Y5H9 948 aa16.07■□□□□ 0.16
UBXN1-209ENST00000528907 TRIP12Q14669 1992 aaPredicted RBP16.06■□□□□ 0.16
UBXN1-209ENST00000528907 SMIM35A0A1B0GVV1 85 aa16.06■□□□□ 0.16
UBXN1-209ENST00000528907 DCDC2CA8MYV0 355 aa16.06■□□□□ 0.16
UBXN1-209ENST00000528907 GAS2O43903 313 aaKnown RBP16.06■□□□□ 0.16
UBXN1-209ENST00000528907 B4GALT4O60513 344 aa16.06■□□□□ 0.16
UBXN1-209ENST00000528907 CAND2O75155 1236 aa16.06■□□□□ 0.16
UBXN1-209ENST00000528907 MAFO75444 373 aaPredicted RBP16.06■□□□□ 0.16
UBXN1-209ENST00000528907 C22orf31O95567 290 aa16.06■□□□□ 0.16
UBXN1-209ENST00000528907 ATN1P54259 1190 aaPredicted RBP16.06■□□□□ 0.16
UBXN1-209ENST00000528907 PTGISQ16647 500 aa16.06■□□□□ 0.16
UBXN1-209ENST00000528907 FAM47CQ5HY64 1035 aa16.06■□□□□ 0.16
UBXN1-209ENST00000528907 TAF2Q6P1X5 1199 aa16.06■□□□□ 0.16
UBXN1-209ENST00000528907 MTHFD1LQ6UB35 978 aa16.06■□□□□ 0.16
UBXN1-209ENST00000528907 CCDC73Q6ZRK6 1079 aa16.06■□□□□ 0.16
UBXN1-209ENST00000528907 LINC01465Q8N7H1 131 aa16.06■□□□□ 0.16
UBXN1-209ENST00000528907 SLC17A8Q8NDX2 589 aa16.06■□□□□ 0.16
UBXN1-209ENST00000528907 CDK5RAP3Q96JB5 506 aa16.06■□□□□ 0.16
UBXN1-209ENST00000528907 CEP170P1Q96L14 293 aa16.06■□□□□ 0.16
UBXN1-209ENST00000528907 GDPD2Q9HCC8 539 aa16.06■□□□□ 0.16
UBXN1-209ENST00000528907 PDLIM7Q9NR12 457 aa16.06■□□□□ 0.16
UBXN1-209ENST00000528907 TUBE1Q9UJT0 475 aa16.06■□□□□ 0.16
UBXN1-209ENST00000528907 ZBTB39O15060 712 aa16.05■□□□□ 0.16
UBXN1-209ENST00000528907 TREHO43280 583 aa16.05■□□□□ 0.16
UBXN1-209ENST00000528907 DGAT1O75907 488 aa16.05■□□□□ 0.16
UBXN1-209ENST00000528907 PLCG1P19174 1290 aa16.05■□□□□ 0.16
UBXN1-209ENST00000528907 KLRC1P26715 233 aa16.05■□□□□ 0.16
UBXN1-209ENST00000528907 TLE2Q04725 743 aa16.05■□□□□ 0.16
UBXN1-209ENST00000528907 FAAP100Q0VG06 881 aa16.05■□□□□ 0.16
UBXN1-209ENST00000528907 KARSQ15046 597 aaKnown RBP16.05■□□□□ 0.16
UBXN1-209ENST00000528907 MTERF2Q49AM1 385 aa16.05■□□□□ 0.16
UBXN1-209ENST00000528907 XKR9Q5GH70 373 aa16.05■□□□□ 0.16
UBXN1-209ENST00000528907 PLA2G4FQ68DD2 849 aa16.05■□□□□ 0.16
UBXN1-209ENST00000528907 KCNK18Q7Z418 384 aa16.05■□□□□ 0.16
UBXN1-209ENST00000528907 ZNF710Q8N1W2 664 aa16.05■□□□□ 0.16
UBXN1-209ENST00000528907 SYT2Q8N9I0 419 aaPredicted RBP16.05■□□□□ 0.16
UBXN1-209ENST00000528907 PIGOQ8TEQ8 1089 aa16.05■□□□□ 0.16
UBXN1-209ENST00000528907 GBP4Q96PP9 640 aa16.05■□□□□ 0.16
UBXN1-209ENST00000528907 CUEDC2Q9H467 287 aa16.05■□□□□ 0.16
UBXN1-209ENST00000528907 BLOC1S4Q9NUP1 217 aa16.05■□□□□ 0.16
UBXN1-209ENST00000528907 TRMT13Q9NUP7 481 aaKnown RBP16.05■□□□□ 0.16
UBXN1-209ENST00000528907 KCND2Q9NZV8 630 aa16.05■□□□□ 0.16
UBXN1-209ENST00000528907 RANBP2P49792 3224 aaKnown RBP16.05■□□□□ 0.16
UBXN1-209ENST00000528907 TMEM150BA6NC51 233 aa16.04■□□□□ 0.16
UBXN1-209ENST00000528907 E9PMD0 336 aa16.04■□□□□ 0.16
UBXN1-209ENST00000528907 NPEPPSP55786 919 aa16.04■□□□□ 0.16
UBXN1-209ENST00000528907 CHMP4BP1P59074 171 aa16.04■□□□□ 0.16
UBXN1-209ENST00000528907 TBC1D8BQ0IIM8 1120 aa16.04■□□□□ 0.16
UBXN1-209ENST00000528907 E2F4Q16254 413 aa16.04■□□□□ 0.16
UBXN1-209ENST00000528907 TRIM71Q2Q1W2 868 aaKnown RBP16.04■□□□□ 0.16
UBXN1-209ENST00000528907 NAALADL2Q58DX5 795 aa16.04■□□□□ 0.16
UBXN1-209ENST00000528907 RRAGBQ5VZM2 374 aa16.04■□□□□ 0.16
UBXN1-209ENST00000528907 NME8Q8N427 588 aa16.04■□□□□ 0.16
UBXN1-209ENST00000528907 RETREG2Q8NC44 543 aa16.04■□□□□ 0.16
UBXN1-209ENST00000528907 CAGE1Q8TC20 777 aa16.04■□□□□ 0.16
UBXN1-209ENST00000528907 MRPS27Q92552 414 aaKnown RBP16.04■□□□□ 0.16
UBXN1-209ENST00000528907 RAD54LQ92698 747 aa16.04■□□□□ 0.16
UBXN1-209ENST00000528907 TRPV6Q9H1D0 765 aa16.04■□□□□ 0.16
UBXN1-209ENST00000528907 BHMT2Q9H2M3 363 aa16.04■□□□□ 0.16
UBXN1-209ENST00000528907 USP25Q9UHP3 1055 aa16.04■□□□□ 0.16
UBXN1-209ENST00000528907 TBX21Q9UL17 535 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms