RNA–Protein interactions for RNA: ENST00000528593.1

CKAP5-209, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 2

Gene CKAP5, Length 366 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-209ENST00000528593 ASAP3Q8TDY4 903 aa6.74□□□□□ -1.33
CKAP5-209ENST00000528593 ZNF526Q8TF50 670 aaPredicted RBP6.74□□□□□ -1.33
CKAP5-209ENST00000528593 ZKSCAN4Q969J2 545 aaPredicted RBP6.74□□□□□ -1.33
CKAP5-209ENST00000528593 UTP4Q969X6 686 aaKnown RBP6.74□□□□□ -1.33
CKAP5-209ENST00000528593 DMRTB1Q96MA1 342 aa6.74□□□□□ -1.33
CKAP5-209ENST00000528593 GBP4Q96PP9 640 aa6.74□□□□□ -1.33
CKAP5-209ENST00000528593 NUP88Q99567 741 aaPredicted RBP6.74□□□□□ -1.33
CKAP5-209ENST00000528593 RUSC1Q9BVN2 902 aa6.74□□□□□ -1.33
CKAP5-209ENST00000528593 SPZ1Q9BXG8 430 aa6.74□□□□□ -1.33
CKAP5-209ENST00000528593 CLEC4MQ9H2X3 399 aaPredicted RBP6.74□□□□□ -1.33
CKAP5-209ENST00000528593 SH2D4AQ9H788 454 aa6.74□□□□□ -1.33
CKAP5-209ENST00000528593 SUGCTQ9HAC7 445 aa6.74□□□□□ -1.33
CKAP5-209ENST00000528593 LIN7BQ9HAP6 207 aa6.74□□□□□ -1.33
CKAP5-209ENST00000528593 VAT1LQ9HCJ6 419 aa6.74□□□□□ -1.33
CKAP5-209ENST00000528593 GINM1Q9NU53 330 aa6.74□□□□□ -1.33
CKAP5-209ENST00000528593 ZNF112Q9UJU3 913 aa6.74□□□□□ -1.33
CKAP5-209ENST00000528593 SYNPO2Q9UMS6 1093 aa6.74□□□□□ -1.33
CKAP5-209ENST00000528593 GREB1LQ9C091 1923 aaPredicted RBP6.74□□□□□ -1.33
CKAP5-209ENST00000528593 WDR90Q96KV7 1748 aa6.73□□□□□ -1.33
CKAP5-209ENST00000528593 A0A096LPE4 126 aa6.73□□□□□ -1.33
CKAP5-209ENST00000528593 A0A1W2PPZ6 126 aa6.73□□□□□ -1.33
CKAP5-209ENST00000528593 GSC2O15499 205 aa6.73□□□□□ -1.33
CKAP5-209ENST00000528593 CYTH3O43739 400 aa6.73□□□□□ -1.33
CKAP5-209ENST00000528593 USP2O75604 605 aaPredicted RBP6.73□□□□□ -1.33
CKAP5-209ENST00000528593 TIAF1O95411 115 aa6.73□□□□□ -1.33
CKAP5-209ENST00000528593 BMP3P12645 472 aa6.73□□□□□ -1.33
CKAP5-209ENST00000528593 SCG2P13521 617 aa6.73□□□□□ -1.33
CKAP5-209ENST00000528593 VEGFAP15692 232 aaPredicted RBP6.73□□□□□ -1.33
CKAP5-209ENST00000528593 ITPKAP23677 461 aa6.73□□□□□ -1.33
CKAP5-209ENST00000528593 SLC16A2P36021 539 aa6.73□□□□□ -1.33
CKAP5-209ENST00000528593 NFKBIBQ15653 356 aa6.73□□□□□ -1.33
CKAP5-209ENST00000528593 PFKFB3Q16875 520 aaPredicted RBP6.73□□□□□ -1.33
CKAP5-209ENST00000528593 KIAA1755Q5JYT7 1200 aa6.73□□□□□ -1.33
CKAP5-209ENST00000528593 GPATCH4Q5T3I0 446 aaKnown RBP6.73□□□□□ -1.33
CKAP5-209ENST00000528593 MAP1SQ66K74 1059 aaPredicted RBP6.73□□□□□ -1.33
CKAP5-209ENST00000528593 HOMER1Q86YM7 354 aa6.73□□□□□ -1.33
CKAP5-209ENST00000528593 SPICE1Q8N0Z3 855 aa6.73□□□□□ -1.33
CKAP5-209ENST00000528593 SMG8Q8ND04 991 aaKnown RBP6.73□□□□□ -1.33
CKAP5-209ENST00000528593 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.73□□□□□ -1.33
CKAP5-209ENST00000528593 SHISA4Q96DD7 197 aa6.73□□□□□ -1.33
CKAP5-209ENST00000528593 RRP36Q96EU6 259 aaKnown RBP6.73□□□□□ -1.33
CKAP5-209ENST00000528593 PIGSQ96S52 555 aa6.73□□□□□ -1.33
CKAP5-209ENST00000528593 FEZ1Q99689 392 aa6.73□□□□□ -1.33
CKAP5-209ENST00000528593 VCPKMTQ9H867 229 aa6.73□□□□□ -1.33
CKAP5-209ENST00000528593 ZFP64Q9NPA5 681 aa6.73□□□□□ -1.33
CKAP5-209ENST00000528593 NMRK2Q9NPI5 230 aa6.73□□□□□ -1.33
CKAP5-209ENST00000528593 PICK1Q9NRD5 415 aa6.73□□□□□ -1.33
CKAP5-209ENST00000528593 VPS54Q9P1Q0 977 aa6.73□□□□□ -1.33
CKAP5-209ENST00000528593 KCNJ14Q9UNX9 436 aa6.73□□□□□ -1.33
CKAP5-209ENST00000528593 HIF3AQ9Y2N7 669 aa6.73□□□□□ -1.33
CKAP5-209ENST00000528593 TMX2Q9Y320 296 aa6.73□□□□□ -1.33
CKAP5-209ENST00000528593 SCO2A0A1W2PP80 73 aa6.72□□□□□ -1.33
CKAP5-209ENST00000528593 KIF28PB7ZC32 967 aa6.72□□□□□ -1.33
CKAP5-209ENST00000528593 TMEM232C9JQI7 657 aa6.72□□□□□ -1.33
CKAP5-209ENST00000528593 EIF1AYO14602 144 aaKnown RBP6.72□□□□□ -1.33
CKAP5-209ENST00000528593 DLGAP3O95886 979 aa6.72□□□□□ -1.33
CKAP5-209ENST00000528593 MMP1P03956 469 aa6.72□□□□□ -1.33
CKAP5-209ENST00000528593 XBP1P17861 261 aa6.72□□□□□ -1.33
CKAP5-209ENST00000528593 NCLP19338 710 aaKnown RBP6.72□□□□□ -1.33
CKAP5-209ENST00000528593 SMARCA1P28370 1054 aa6.72□□□□□ -1.33
CKAP5-209ENST00000528593 MCM4P33991 863 aa6.72□□□□□ -1.33
CKAP5-209ENST00000528593 NF2P35240 595 aa6.72□□□□□ -1.33
CKAP5-209ENST00000528593 KIF23Q02241 960 aaPredicted RBP6.72□□□□□ -1.33
CKAP5-209ENST00000528593 PCDH1Q08174 1060 aa6.72□□□□□ -1.33
CKAP5-209ENST00000528593 IKQ13123 557 aaPredicted RBP6.72□□□□□ -1.33
CKAP5-209ENST00000528593 GNL2Q13823 731 aaKnown RBP6.72□□□□□ -1.33
CKAP5-209ENST00000528593 VGLL4Q14135 290 aa6.72□□□□□ -1.33
CKAP5-209ENST00000528593 SAFBQ15424 915 aaKnown RBP eCLIP6.72□□□□□ -1.33
CKAP5-209ENST00000528593 ZNF423Q2M1K9 1284 aa6.72□□□□□ -1.33
CKAP5-209ENST00000528593 NOL9Q5SY16 702 aaKnown RBP6.72□□□□□ -1.33
CKAP5-209ENST00000528593 FAM83BQ5T0W9 1011 aa6.72□□□□□ -1.33
CKAP5-209ENST00000528593 WWC2Q6AWC2 1192 aa6.72□□□□□ -1.33
CKAP5-209ENST00000528593 FAM173BQ6P4H8 233 aa6.72□□□□□ -1.33
CKAP5-209ENST00000528593 CLEC17AQ6ZS10 378 aa6.72□□□□□ -1.33
CKAP5-209ENST00000528593 MOB2Q70IA6 237 aa6.72□□□□□ -1.33
CKAP5-209ENST00000528593 HEATR3Q7Z4Q2 680 aa6.72□□□□□ -1.33
CKAP5-209ENST00000528593 FAM20CQ8IXL6 584 aa6.72□□□□□ -1.33
CKAP5-209ENST00000528593 DIS3L2Q8IYB7 885 aaKnown RBP6.72□□□□□ -1.33
CKAP5-209ENST00000528593 ADGRF4Q8IZF3 695 aa6.72□□□□□ -1.33
CKAP5-209ENST00000528593 RGS22Q8NE09 1264 aa6.72□□□□□ -1.33
CKAP5-209ENST00000528593 WDR18Q9BV38 432 aa6.72□□□□□ -1.33
CKAP5-209ENST00000528593 ZSCAN16Q9H4T2 348 aaPredicted RBP6.72□□□□□ -1.33
CKAP5-209ENST00000528593 ZNF576Q9H609 170 aa6.72□□□□□ -1.33
CKAP5-209ENST00000528593 RIOX1Q9H6W3 641 aa6.72□□□□□ -1.33
CKAP5-209ENST00000528593 JMJD4Q9H9V9 463 aa6.72□□□□□ -1.33
CKAP5-209ENST00000528593 AS3MTQ9HBK9 375 aa6.72□□□□□ -1.33
CKAP5-209ENST00000528593 NPHS2Q9NP85 383 aa6.72□□□□□ -1.33
CKAP5-209ENST00000528593 SEC63Q9UGP8 760 aaKnown RBP6.72□□□□□ -1.33
CKAP5-209ENST00000528593 ATP6V1DQ9Y5K8 247 aa6.72□□□□□ -1.33
CKAP5-209ENST00000528593 SNCAIPQ9Y6H5 919 aa6.72□□□□□ -1.33
CKAP5-209ENST00000528593 TRIM75PA6NK02 468 aa6.71□□□□□ -1.34
CKAP5-209ENST00000528593 STXBP3O00186 592 aa6.71□□□□□ -1.34
CKAP5-209ENST00000528593 TRAF5O00463 557 aa6.71□□□□□ -1.34
CKAP5-209ENST00000528593 B3GALT4O96024 378 aa6.71□□□□□ -1.34
CKAP5-209ENST00000528593 IGLV1-40P01703 118 aa6.71□□□□□ -1.34
CKAP5-209ENST00000528593 NLRP5P59047 1200 aa6.71□□□□□ -1.34
CKAP5-209ENST00000528593 SNAP25P60880 206 aa6.71□□□□□ -1.34
CKAP5-209ENST00000528593 FMR1Q06787 632 aaKnown RBP eCLIP6.71□□□□□ -1.34
CKAP5-209ENST00000528593 SPP2Q13103 211 aa6.71□□□□□ -1.34
CKAP5-209ENST00000528593 SPRED3Q2MJR0 410 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms