RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 RDXP35241 583 aaKnown RBP13.65□□□□□ -0.22
CAPN1-208ENST00000527323 FNTAP49354 379 aa13.65□□□□□ -0.22
CAPN1-208ENST00000527323 PTK2Q05397 1052 aa13.65□□□□□ -0.22
CAPN1-208ENST00000527323 SLC16A10Q8TF71 515 aa13.65□□□□□ -0.22
CAPN1-208ENST00000527323 JDP2Q8WYK2 163 aa13.65□□□□□ -0.22
CAPN1-208ENST00000527323 CCDC114Q96M63 670 aa13.65□□□□□ -0.22
CAPN1-208ENST00000527323 DDX47Q9H0S4 455 aaKnown RBP13.65□□□□□ -0.22
CAPN1-208ENST00000527323 EMILIN3Q9NT22 766 aa13.65□□□□□ -0.22
CAPN1-208ENST00000527323 KRIT1O00522 736 aa13.65□□□□□ -0.22
CAPN1-208ENST00000527323 SART1O43290 800 aaKnown RBP13.65□□□□□ -0.22
CAPN1-208ENST00000527323 ATP2C2O75185 946 aa13.65□□□□□ -0.22
CAPN1-208ENST00000527323 IBSPP21815 317 aaPredicted RBP13.65□□□□□ -0.22
CAPN1-208ENST00000527323 TMOD1P28289 359 aa13.65□□□□□ -0.22
CAPN1-208ENST00000527323 MAP2K2P36507 400 aa13.65□□□□□ -0.22
CAPN1-208ENST00000527323 CDR1P51861 262 aa13.65□□□□□ -0.22
CAPN1-208ENST00000527323 IFI16Q16666 785 aaKnown RBP13.65□□□□□ -0.22
CAPN1-208ENST00000527323 PPP4R3AQ6IN85 833 aa13.65□□□□□ -0.22
CAPN1-208ENST00000527323 GPBP1Q86WP2 473 aa13.65□□□□□ -0.22
CAPN1-208ENST00000527323 TRIM59Q8IWR1 403 aa13.65□□□□□ -0.22
CAPN1-208ENST00000527323 PBKQ96KB5 322 aa13.65□□□□□ -0.22
CAPN1-208ENST00000527323 PLCB1Q9NQ66 1216 aa13.65□□□□□ -0.22
CAPN1-208ENST00000527323 GMNCA6NCL1 334 aa13.65□□□□□ -0.23
CAPN1-208ENST00000527323 BACH1O14867 736 aa13.65□□□□□ -0.23
CAPN1-208ENST00000527323 TMEM119Q4V9L6 283 aa13.65□□□□□ -0.23
CAPN1-208ENST00000527323 ZCWPW2Q504Y3 356 aa13.65□□□□□ -0.23
CAPN1-208ENST00000527323 STRIP1Q5VSL9 837 aa13.65□□□□□ -0.23
CAPN1-208ENST00000527323 RUFY4Q6ZNE9 571 aa13.65□□□□□ -0.23
CAPN1-208ENST00000527323 C15orf52Q6ZUT6 534 aaKnown RBP13.65□□□□□ -0.23
CAPN1-208ENST00000527323 SH3BP5LQ7L8J4 393 aa13.65□□□□□ -0.23
CAPN1-208ENST00000527323 SPICE1Q8N0Z3 855 aa13.65□□□□□ -0.23
CAPN1-208ENST00000527323 AIPL1Q9NZN9 384 aa13.65□□□□□ -0.23
CAPN1-208ENST00000527323 ESYT2A0FGR8 921 aa13.64□□□□□ -0.23
CAPN1-208ENST00000527323 SLC9A1P19634 815 aa13.64□□□□□ -0.23
CAPN1-208ENST00000527323 JAG1P78504 1218 aa13.64□□□□□ -0.23
CAPN1-208ENST00000527323 DGKZQ13574 1117 aa13.64□□□□□ -0.23
CAPN1-208ENST00000527323 CUL1Q13616 776 aa13.64□□□□□ -0.23
CAPN1-208ENST00000527323 TCERG1LQ5VWI1 586 aa13.64□□□□□ -0.23
CAPN1-208ENST00000527323 PEX26Q7Z412 305 aa13.64□□□□□ -0.23
CAPN1-208ENST00000527323 CYFIP2Q96F07 1278 aa13.64□□□□□ -0.23
CAPN1-208ENST00000527323 FAM198AQ9UFP1 575 aa13.64□□□□□ -0.23
CAPN1-208ENST00000527323 NOVA2Q9UNW9 492 aaKnown RBP13.64□□□□□ -0.23
CAPN1-208ENST00000527323 C10orf71Q711Q0 1435 aa13.64□□□□□ -0.23
CAPN1-208ENST00000527323 PGRMC1O00264 195 aaKnown RBP13.64□□□□□ -0.23
CAPN1-208ENST00000527323 USP11P51784 963 aa13.64□□□□□ -0.23
CAPN1-208ENST00000527323 PPP4CP60510 307 aa13.64□□□□□ -0.23
CAPN1-208ENST00000527323 ALKBH5Q6P6C2 394 aaKnown RBP13.64□□□□□ -0.23
CAPN1-208ENST00000527323 LRIG3Q6UXM1 1119 aa13.64□□□□□ -0.23
CAPN1-208ENST00000527323 FBXL5Q9UKA1 691 aa13.64□□□□□ -0.23
CAPN1-208ENST00000527323 ATXN2Q99700 1313 aaKnown RBP13.63□□□□□ -0.23
CAPN1-208ENST00000527323 CLSTN1O94985 981 aa13.63□□□□□ -0.23
CAPN1-208ENST00000527323 PLA2G4BP0C869 781 aa13.63□□□□□ -0.23
CAPN1-208ENST00000527323 NR2F2P24468 414 aa13.63□□□□□ -0.23
CAPN1-208ENST00000527323 SLC16A2P36021 539 aa13.63□□□□□ -0.23
CAPN1-208ENST00000527323 IFFO1Q0D2I5 559 aa13.63□□□□□ -0.23
CAPN1-208ENST00000527323 SEPT2Q15019 361 aa13.63□□□□□ -0.23
CAPN1-208ENST00000527323 EMC10Q5UCC4 262 aa13.63□□□□□ -0.23
CAPN1-208ENST00000527323 C16orf86Q6ZW13 317 aa13.63□□□□□ -0.23
CAPN1-208ENST00000527323 ZNF571Q7Z3V5 609 aaPredicted RBP13.63□□□□□ -0.23
CAPN1-208ENST00000527323 YTHDF3Q7Z739 585 aaKnown RBP13.63□□□□□ -0.23
CAPN1-208ENST00000527323 SGIP1Q9BQI5 828 aa13.63□□□□□ -0.23
CAPN1-208ENST00000527323 TRIM31Q9BZY9 425 aa13.63□□□□□ -0.23
CAPN1-208ENST00000527323 AMACRQ9UHK6 382 aa13.63□□□□□ -0.23
CAPN1-208ENST00000527323 DAPK3O43293 454 aa13.63□□□□□ -0.23
CAPN1-208ENST00000527323 HOXA7P31268 230 aaPredicted RBP13.63□□□□□ -0.23
CAPN1-208ENST00000527323 ACTN3Q08043 901 aaPredicted RBP13.63□□□□□ -0.23
CAPN1-208ENST00000527323 DCAF17Q5H9S7 520 aaPredicted RBP13.63□□□□□ -0.23
CAPN1-208ENST00000527323 IFNLR1Q8IU57 520 aaPredicted RBP13.63□□□□□ -0.23
CAPN1-208ENST00000527323 CCDC13Q8IYE1 715 aa13.63□□□□□ -0.23
CAPN1-208ENST00000527323 OGFOD1Q8N543 542 aa13.63□□□□□ -0.23
CAPN1-208ENST00000527323 METTL13Q8N6R0 699 aa13.63□□□□□ -0.23
CAPN1-208ENST00000527323 NT5C3AQ9H0P0 336 aa13.63□□□□□ -0.23
CAPN1-208ENST00000527323 DPH5Q9H2P9 285 aa13.63□□□□□ -0.23
CAPN1-208ENST00000527323 RIOX1Q9H6W3 641 aa13.63□□□□□ -0.23
CAPN1-208ENST00000527323 CD248Q9HCU0 757 aa13.63□□□□□ -0.23
CAPN1-208ENST00000527323 HDAC9Q9UKV0 1011 aa13.63□□□□□ -0.23
CAPN1-208ENST00000527323 FAM170AA1A519 330 aa13.62□□□□□ -0.23
CAPN1-208ENST00000527323 PDHBP11177 359 aa13.62□□□□□ -0.23
CAPN1-208ENST00000527323 SMARCA1P28370 1054 aa13.62□□□□□ -0.23
CAPN1-208ENST00000527323 ZNF844Q08AG5 666 aa13.62□□□□□ -0.23
CAPN1-208ENST00000527323 KRT71Q3SY84 523 aa13.62□□□□□ -0.23
CAPN1-208ENST00000527323 CCDC125Q86Z20 511 aa13.62□□□□□ -0.23
CAPN1-208ENST00000527323 RTKN2Q8IZC4 609 aa13.62□□□□□ -0.23
CAPN1-208ENST00000527323 C1orf131Q8NDD1 294 aaKnown RBP13.62□□□□□ -0.23
CAPN1-208ENST00000527323 ZNF526Q8TF50 670 aaPredicted RBP13.62□□□□□ -0.23
CAPN1-208ENST00000527323 SCFD1Q8WVM8 642 aa13.62□□□□□ -0.23
CAPN1-208ENST00000527323 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.62□□□□□ -0.23
CAPN1-208ENST00000527323 KLC4Q9NSK0 619 aa13.62□□□□□ -0.23
CAPN1-208ENST00000527323 NOC2LQ9Y3T9 749 aaKnown RBP13.62□□□□□ -0.23
CAPN1-208ENST00000527323 CCDC88AQ3V6T2 1871 aa13.62□□□□□ -0.23
CAPN1-208ENST00000527323 ROBO3Q96MS0 1386 aa13.62□□□□□ -0.23
CAPN1-208ENST00000527323 EDIL3O43854 480 aa13.62□□□□□ -0.23
CAPN1-208ENST00000527323 ITGA4P13612 1032 aa13.62□□□□□ -0.23
CAPN1-208ENST00000527323 RRP1BQ14684 758 aaKnown RBP13.62□□□□□ -0.23
CAPN1-208ENST00000527323 UAP1Q16222 522 aaPredicted RBP13.62□□□□□ -0.23
CAPN1-208ENST00000527323 C10orf76Q5T2E6 689 aa13.62□□□□□ -0.23
CAPN1-208ENST00000527323 CPLX4Q7Z7G2 160 aa13.62□□□□□ -0.23
CAPN1-208ENST00000527323 CCDC26Q8TAB7 109 aa13.62□□□□□ -0.23
CAPN1-208ENST00000527323 SCFD2Q8WU76 684 aa13.62□□□□□ -0.23
CAPN1-208ENST00000527323 LMBR1Q8WVP7 490 aa13.62□□□□□ -0.23
CAPN1-208ENST00000527323 HAS1Q92839 578 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms