RNA–Protein interactions for RNA: ENST00000525854.5

HIF3A-209, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-209ENST00000525854 ATP4AP20648 1035 aa13.14□□□□□ -0.31
HIF3A-209ENST00000525854 CYP3A7P24462 503 aa13.14□□□□□ -0.31
HIF3A-209ENST00000525854 SCRN1Q12765 414 aa13.14□□□□□ -0.31
HIF3A-209ENST00000525854 NONOQ15233 471 aaKnown RBP eCLIP13.14□□□□□ -0.31
HIF3A-209ENST00000525854 MOXD1Q6UVY6 613 aa13.14□□□□□ -0.31
HIF3A-209ENST00000525854 KRT25Q7Z3Z0 450 aa13.14□□□□□ -0.31
HIF3A-209ENST00000525854 TMEM192Q8IY95 271 aa13.14□□□□□ -0.31
HIF3A-209ENST00000525854 ZNF710Q8N1W2 664 aa13.14□□□□□ -0.31
HIF3A-209ENST00000525854 RDM1Q8NG50 284 aa13.14□□□□□ -0.31
HIF3A-209ENST00000525854 ADAMTS19Q8TE59 1207 aa13.14□□□□□ -0.31
HIF3A-209ENST00000525854 WASF1Q92558 559 aa13.14□□□□□ -0.31
HIF3A-209ENST00000525854 MRPL38Q96DV4 380 aaKnown RBP13.14□□□□□ -0.31
HIF3A-209ENST00000525854 NRBP2Q9NSY0 501 aa13.14□□□□□ -0.31
HIF3A-209ENST00000525854 RNF216Q9NWF9 866 aaPredicted RBP13.14□□□□□ -0.31
HIF3A-209ENST00000525854 TPCN1Q9ULQ1 816 aa13.14□□□□□ -0.31
HIF3A-209ENST00000525854 PADI3Q9ULW8 664 aa13.14□□□□□ -0.31
HIF3A-209ENST00000525854 GINS2Q9Y248 185 aa13.14□□□□□ -0.31
HIF3A-209ENST00000525854 COL4A6Q14031 1691 aa13.14□□□□□ -0.31
HIF3A-209ENST00000525854 ADGRA3Q8IWK6 1321 aa13.13□□□□□ -0.31
HIF3A-209ENST00000525854 STK36Q9NRP7 1315 aa13.13□□□□□ -0.31
HIF3A-209ENST00000525854 H3BNC9 293 aa13.13□□□□□ -0.31
HIF3A-209ENST00000525854 M0R2N6 131 aa13.13□□□□□ -0.31
HIF3A-209ENST00000525854 TNFRSF10AO00220 468 aa13.13□□□□□ -0.31
HIF3A-209ENST00000525854 EDIL3O43854 480 aa13.13□□□□□ -0.31
HIF3A-209ENST00000525854 OATP04181 439 aa13.13□□□□□ -0.31
HIF3A-209ENST00000525854 RB1P06400 928 aa13.13□□□□□ -0.31
HIF3A-209ENST00000525854 STAG3L1P0CL83 205 aa13.13□□□□□ -0.31
HIF3A-209ENST00000525854 TMOD1P28289 359 aa13.13□□□□□ -0.31
HIF3A-209ENST00000525854 TFF2Q03403 129 aa13.13□□□□□ -0.31
HIF3A-209ENST00000525854 NFX1Q12986 1120 aaKnown RBP13.13□□□□□ -0.31
HIF3A-209ENST00000525854 TRMT1LQ7Z2T5 733 aaKnown RBP13.13□□□□□ -0.31
HIF3A-209ENST00000525854 NPAS4Q8IUM7 802 aa13.13□□□□□ -0.31
HIF3A-209ENST00000525854 METTL13Q8N6R0 699 aa13.13□□□□□ -0.31
HIF3A-209ENST00000525854 AIFM3Q96NN9 605 aa13.13□□□□□ -0.31
HIF3A-209ENST00000525854 MAP7D2Q96T17 732 aa13.13□□□□□ -0.31
HIF3A-209ENST00000525854 CCDC194A0A1B0GVG4 234 aa13.12□□□□□ -0.31
HIF3A-209ENST00000525854 GPR182O15218 404 aa13.12□□□□□ -0.31
HIF3A-209ENST00000525854 CHMP2AO43633 222 aa13.12□□□□□ -0.31
HIF3A-209ENST00000525854 RPS6KA5O75582 802 aa13.12□□□□□ -0.31
HIF3A-209ENST00000525854 PSMD10O75832 226 aa13.12□□□□□ -0.31
HIF3A-209ENST00000525854 DGKIO75912 1065 aa13.12□□□□□ -0.31
HIF3A-209ENST00000525854 TDP2O95551 362 aa13.12□□□□□ -0.31
HIF3A-209ENST00000525854 CTNNB1P35222 781 aa13.12□□□□□ -0.31
HIF3A-209ENST00000525854 CRYBB1P53674 252 aaPredicted RBP13.12□□□□□ -0.31
HIF3A-209ENST00000525854 PRKCEQ02156 737 aa13.12□□□□□ -0.31
HIF3A-209ENST00000525854 GPM6BQ13491 265 aa13.12□□□□□ -0.31
HIF3A-209ENST00000525854 BTG3Q14201 252 aaPredicted RBP13.12□□□□□ -0.31
HIF3A-209ENST00000525854 NPY5RQ15761 445 aa13.12□□□□□ -0.31
HIF3A-209ENST00000525854 TIGD5Q53EQ6 642 aa13.12□□□□□ -0.31
HIF3A-209ENST00000525854 RTN4RL1Q86UN2 441 aaPredicted RBP13.12□□□□□ -0.31
HIF3A-209ENST00000525854 ZNF689Q96CS4 500 aaPredicted RBP13.12□□□□□ -0.31
HIF3A-209ENST00000525854 MBOAT7Q96N66 472 aa13.12□□□□□ -0.31
HIF3A-209ENST00000525854 UHRF1Q96T88 793 aaPredicted RBP13.12□□□□□ -0.31
HIF3A-209ENST00000525854 NAP1L4Q99733 375 aaKnown RBP13.12□□□□□ -0.31
HIF3A-209ENST00000525854 C11orf84Q9BUA3 381 aaPredicted RBP13.12□□□□□ -0.31
HIF3A-209ENST00000525854 PHF20Q9BVI0 1012 aa13.12□□□□□ -0.31
HIF3A-209ENST00000525854 UNC45AQ9H3U1 944 aa13.12□□□□□ -0.31
HIF3A-209ENST00000525854 RC3H2Q9HBD1 1191 aaKnown RBP13.12□□□□□ -0.31
HIF3A-209ENST00000525854 DDX25Q9UHL0 483 aaKnown RBP13.12□□□□□ -0.31
HIF3A-209ENST00000525854 KCNJ14Q9UNX9 436 aa13.12□□□□□ -0.31
HIF3A-209ENST00000525854 VCANP13611 3396 aa13.11□□□□□ -0.31
HIF3A-209ENST00000525854 C5orf67F2Z3F1 127 aa13.11□□□□□ -0.31
HIF3A-209ENST00000525854 BMP1P13497 986 aa13.11□□□□□ -0.31
HIF3A-209ENST00000525854 GCFC2P16383 781 aaKnown RBP13.11□□□□□ -0.31
HIF3A-209ENST00000525854 BMPR1AP36894 532 aa13.11□□□□□ -0.31
HIF3A-209ENST00000525854 AK2P54819 239 aa13.11□□□□□ -0.31
HIF3A-209ENST00000525854 INF2Q27J81 1249 aa13.11□□□□□ -0.31
HIF3A-209ENST00000525854 KIZQ2M2Z5 673 aa13.11□□□□□ -0.31
HIF3A-209ENST00000525854 TMEM266Q2M3C6 531 aa13.11□□□□□ -0.31
HIF3A-209ENST00000525854 EFCAB12Q6NXP0 572 aa13.11□□□□□ -0.31
HIF3A-209ENST00000525854 MIER3Q7Z3K6 550 aa13.11□□□□□ -0.31
HIF3A-209ENST00000525854 CMTR2Q8IYT2 770 aaKnown RBP13.11□□□□□ -0.31
HIF3A-209ENST00000525854 LINC01599Q8WXQ3 324 aa13.11□□□□□ -0.31
HIF3A-209ENST00000525854 CLP1Q92989 425 aaKnown RBP13.11□□□□□ -0.31
HIF3A-209ENST00000525854 ERVK-5Q9HDB9 667 aa13.11□□□□□ -0.31
HIF3A-209ENST00000525854 C1orf112Q9NSG2 853 aa13.11□□□□□ -0.31
HIF3A-209ENST00000525854 ORC3Q9UBD5 711 aaPredicted RBP13.11□□□□□ -0.31
HIF3A-209ENST00000525854 LRFN2Q9ULH4 789 aa13.11□□□□□ -0.31
HIF3A-209ENST00000525854 NOC2LQ9Y3T9 749 aaKnown RBP13.11□□□□□ -0.31
HIF3A-209ENST00000525854 SIP14410 1827 aa13.11□□□□□ -0.31
HIF3A-209ENST00000525854 TRANK1O15050 2925 aa13.1□□□□□ -0.31
HIF3A-209ENST00000525854 TTC3P53804 2025 aa13.1□□□□□ -0.31
HIF3A-209ENST00000525854 COL4A4P53420 1690 aaPredicted RBP13.1□□□□□ -0.31
HIF3A-209ENST00000525854 DENND3A2RUS2 1198 aa13.1□□□□□ -0.31
HIF3A-209ENST00000525854 ZNF862O60290 1169 aa13.1□□□□□ -0.31
HIF3A-209ENST00000525854 VTNP04004 478 aa13.1□□□□□ -0.31
HIF3A-209ENST00000525854 SARSP49591 514 aaKnown RBP13.1□□□□□ -0.31
HIF3A-209ENST00000525854 KCNQ1P51787 676 aa13.1□□□□□ -0.31
HIF3A-209ENST00000525854 LETM2Q2VYF4 491 aa13.1□□□□□ -0.31
HIF3A-209ENST00000525854 PPP4R3AQ6IN85 833 aa13.1□□□□□ -0.31
HIF3A-209ENST00000525854 NEK8Q86SG6 692 aa13.1□□□□□ -0.31
HIF3A-209ENST00000525854 CRIPAKQ8N1N5 446 aa13.1□□□□□ -0.31
HIF3A-209ENST00000525854 ETNPPLQ8TBG4 499 aa13.1□□□□□ -0.31
HIF3A-209ENST00000525854 TMEM40Q8WWA1 233 aa13.1□□□□□ -0.31
HIF3A-209ENST00000525854 GJA10Q969M2 543 aa13.1□□□□□ -0.31
HIF3A-209ENST00000525854 FAM20AQ96MK3 541 aa13.1□□□□□ -0.31
HIF3A-209ENST00000525854 PLVAPQ9BX97 442 aa13.1□□□□□ -0.31
HIF3A-209ENST00000525854 LMAN2LQ9H0V9 348 aa13.1□□□□□ -0.31
HIF3A-209ENST00000525854 TMX1Q9H3N1 280 aa13.1□□□□□ -0.31
HIF3A-209ENST00000525854 CDHR5Q9HBB8 845 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms