RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 ATP9AO75110 1047 aa10.99□□□□□ -0.65
VPS13B-212ENST00000524330 HIP1RO75146 1068 aa10.99□□□□□ -0.65
VPS13B-212ENST00000524330 OFD1O75665 1012 aa10.99□□□□□ -0.65
VPS13B-212ENST00000524330 CNMDO75829 334 aa10.99□□□□□ -0.65
VPS13B-212ENST00000524330 DGAT1O75907 488 aa10.99□□□□□ -0.65
VPS13B-212ENST00000524330 SUPT20HL2P0C7V6 817 aa10.99□□□□□ -0.65
VPS13B-212ENST00000524330 PLS3P13797 630 aa10.99□□□□□ -0.65
VPS13B-212ENST00000524330 TRIM21P19474 475 aaKnown RBP10.99□□□□□ -0.65
VPS13B-212ENST00000524330 EDNRBP24530 442 aa10.99□□□□□ -0.65
VPS13B-212ENST00000524330 PBX1P40424 430 aa10.99□□□□□ -0.65
VPS13B-212ENST00000524330 RARRES1P49788 294 aa10.99□□□□□ -0.65
VPS13B-212ENST00000524330 PMS1P54277 932 aaKnown RBP10.99□□□□□ -0.65
VPS13B-212ENST00000524330 MARSP56192 900 aaKnown RBP10.99□□□□□ -0.65
VPS13B-212ENST00000524330 ACTR2P61160 394 aa10.99□□□□□ -0.65
VPS13B-212ENST00000524330 CCZ1BP86790 482 aa10.99□□□□□ -0.65
VPS13B-212ENST00000524330 CCZ1P86791 482 aaPredicted RBP10.99□□□□□ -0.65
VPS13B-212ENST00000524330 CACNB1Q02641 598 aaPredicted RBP10.99□□□□□ -0.65
VPS13B-212ENST00000524330 LRMPQ12912 555 aa10.99□□□□□ -0.65
VPS13B-212ENST00000524330 XKR3Q5GH77 459 aa10.99□□□□□ -0.65
VPS13B-212ENST00000524330 FIGNQ5HY92 759 aa10.99□□□□□ -0.65
VPS13B-212ENST00000524330 CHADLQ6NUI6 762 aa10.99□□□□□ -0.65
VPS13B-212ENST00000524330 ARMCX5Q6P1M9 558 aa10.99□□□□□ -0.65
VPS13B-212ENST00000524330 EPM2AIP1Q7L775 607 aaPredicted RBP10.99□□□□□ -0.65
VPS13B-212ENST00000524330 FRMD5Q7Z6J6 570 aa10.99□□□□□ -0.65
VPS13B-212ENST00000524330 TMTC1Q8IUR5 882 aa10.99□□□□□ -0.65
VPS13B-212ENST00000524330 HPS3Q969F9 1004 aa10.99□□□□□ -0.65
VPS13B-212ENST00000524330 CEP170P1Q96L14 293 aa10.99□□□□□ -0.65
VPS13B-212ENST00000524330 IFT74Q96LB3 600 aa10.99□□□□□ -0.65
VPS13B-212ENST00000524330 ACCSQ96QU6 501 aa10.99□□□□□ -0.65
VPS13B-212ENST00000524330 ERGIC2Q96RQ1 377 aa10.99□□□□□ -0.65
VPS13B-212ENST00000524330 JPH2Q9BR39 696 aaPredicted RBP10.99□□□□□ -0.65
VPS13B-212ENST00000524330 MKNK1Q9BUB5 465 aa10.99□□□□□ -0.65
VPS13B-212ENST00000524330 EDEM3Q9BZQ6 932 aa10.99□□□□□ -0.65
VPS13B-212ENST00000524330 NUCKS1Q9H1E3 243 aaKnown RBP10.99□□□□□ -0.65
VPS13B-212ENST00000524330 NDST4Q9H3R1 872 aa10.99□□□□□ -0.65
VPS13B-212ENST00000524330 AZI2Q9H6S1 392 aa10.99□□□□□ -0.65
VPS13B-212ENST00000524330 MLXIPQ9HAP2 919 aa10.99□□□□□ -0.65
VPS13B-212ENST00000524330 ZNF302Q9NR11 478 aa10.99□□□□□ -0.65
VPS13B-212ENST00000524330 INTS13Q9NVM9 706 aa10.99□□□□□ -0.65
VPS13B-212ENST00000524330 RBPJLQ9UBG7 517 aa10.99□□□□□ -0.65
VPS13B-212ENST00000524330 ARMCX3Q9UH62 379 aaPredicted RBP10.99□□□□□ -0.65
VPS13B-212ENST00000524330 PYCARDQ9ULZ3 195 aa10.99□□□□□ -0.65
VPS13B-212ENST00000524330 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.99□□□□□ -0.65
VPS13B-212ENST00000524330 MANSC4A6NHS7 340 aaPredicted RBP10.98□□□□□ -0.65
VPS13B-212ENST00000524330 K7ENM7 598 aa10.98□□□□□ -0.65
VPS13B-212ENST00000524330 NOP56O00567 594 aaKnown RBP10.98□□□□□ -0.65
VPS13B-212ENST00000524330 TEX33O43247 280 aa10.98□□□□□ -0.65
VPS13B-212ENST00000524330 USO1O60763 962 aaKnown RBP10.98□□□□□ -0.65
VPS13B-212ENST00000524330 MFAP3LO75121 409 aa10.98□□□□□ -0.65
VPS13B-212ENST00000524330 COBLO75128 1261 aa10.98□□□□□ -0.65
VPS13B-212ENST00000524330 IPO7O95373 1038 aaKnown RBP10.98□□□□□ -0.65
VPS13B-212ENST00000524330 NR2F2P24468 414 aa10.98□□□□□ -0.65
VPS13B-212ENST00000524330 DMP1Q13316 513 aaPredicted RBP10.98□□□□□ -0.65
VPS13B-212ENST00000524330 MOGSQ13724 837 aa10.98□□□□□ -0.65
VPS13B-212ENST00000524330 TTLL4Q14679 1199 aa10.98□□□□□ -0.65
VPS13B-212ENST00000524330 PPP2R5AQ15172 486 aa10.98□□□□□ -0.65
VPS13B-212ENST00000524330 ZCWPW2Q504Y3 356 aa10.98□□□□□ -0.65
VPS13B-212ENST00000524330 SPRYD7Q5W111 196 aa10.98□□□□□ -0.65
VPS13B-212ENST00000524330 SWSAP1Q6NVH7 229 aa10.98□□□□□ -0.65
VPS13B-212ENST00000524330 ZNF720Q7Z2F6 126 aa10.98□□□□□ -0.65
VPS13B-212ENST00000524330 IRF2BP1Q8IU81 584 aa10.98□□□□□ -0.65
VPS13B-212ENST00000524330 TXLNBQ8N3L3 684 aa10.98□□□□□ -0.65
VPS13B-212ENST00000524330 OR8K1Q8NGG5 319 aa10.98□□□□□ -0.65
VPS13B-212ENST00000524330 SEPT1Q8WYJ6 367 aa10.98□□□□□ -0.65
VPS13B-212ENST00000524330 GBP3Q9H0R5 595 aa10.98□□□□□ -0.65
VPS13B-212ENST00000524330 KCTD10Q9H3F6 313 aa10.98□□□□□ -0.65
VPS13B-212ENST00000524330 ST6GALNAC4Q9H4F1 302 aa10.98□□□□□ -0.65
VPS13B-212ENST00000524330 ATP6V0A4Q9HBG4 840 aa10.98□□□□□ -0.65
VPS13B-212ENST00000524330 MORF4L1Q9UBU8 362 aa10.98□□□□□ -0.65
VPS13B-212ENST00000524330 FRMD4BQ9Y2L6 1034 aa10.98□□□□□ -0.65
VPS13B-212ENST00000524330 PHLPP2Q6ZVD8 1323 aa10.98□□□□□ -0.65
VPS13B-212ENST00000524330 A0A1W2PQJ5 194 aa10.97□□□□□ -0.65
VPS13B-212ENST00000524330 SOWAHBA6NEL2 793 aa10.97□□□□□ -0.65
VPS13B-212ENST00000524330 PRPF6O94906 941 aaKnown RBP10.97□□□□□ -0.65
VPS13B-212ENST00000524330 ATG7O95352 703 aa10.97□□□□□ -0.65
VPS13B-212ENST00000524330 CCNE2O96020 404 aa10.97□□□□□ -0.65
VPS13B-212ENST00000524330 NR3C1P04150 777 aa10.97□□□□□ -0.65
VPS13B-212ENST00000524330 MAPK4P31152 587 aa10.97□□□□□ -0.65
VPS13B-212ENST00000524330 PSMC2P35998 433 aaKnown RBP10.97□□□□□ -0.65
VPS13B-212ENST00000524330 RFC5P40937 340 aa10.97□□□□□ -0.65
VPS13B-212ENST00000524330 INHBEP58166 350 aa10.97□□□□□ -0.65
VPS13B-212ENST00000524330 RTP1P59025 263 aa10.97□□□□□ -0.65
VPS13B-212ENST00000524330 CNTN2Q02246 1040 aa10.97□□□□□ -0.65
VPS13B-212ENST00000524330 RBL2Q08999 1139 aa10.97□□□□□ -0.65
VPS13B-212ENST00000524330 PTPN14Q15678 1187 aa10.97□□□□□ -0.65
VPS13B-212ENST00000524330 FAM102BQ5T8I3 360 aa10.97□□□□□ -0.65
VPS13B-212ENST00000524330 METTL7BQ6UX53 244 aa10.97□□□□□ -0.65
VPS13B-212ENST00000524330 ABHD15Q6UXT9 468 aa10.97□□□□□ -0.65
VPS13B-212ENST00000524330 CYP26C1Q6V0L0 522 aa10.97□□□□□ -0.65
VPS13B-212ENST00000524330 LRRC55Q6ZSA7 311 aa10.97□□□□□ -0.65
VPS13B-212ENST00000524330 ZNF467Q7Z7K2 595 aaPredicted RBP10.97□□□□□ -0.65
VPS13B-212ENST00000524330 USP37Q86T82 979 aa10.97□□□□□ -0.65
VPS13B-212ENST00000524330 FMNL3Q8IVF7 1028 aa10.97□□□□□ -0.65
VPS13B-212ENST00000524330 ZC3H3Q8IXZ2 948 aaKnown RBP10.97□□□□□ -0.65
VPS13B-212ENST00000524330 TC2NQ8N9U0 490 aa10.97□□□□□ -0.65
VPS13B-212ENST00000524330 NEK11Q8NG66 645 aa10.97□□□□□ -0.65
VPS13B-212ENST00000524330 SCFD2Q8WU76 684 aa10.97□□□□□ -0.65
VPS13B-212ENST00000524330 CPLX3Q8WVH0 158 aa10.97□□□□□ -0.65
VPS13B-212ENST00000524330 PURBQ96QR8 312 aaKnown RBP10.97□□□□□ -0.65
VPS13B-212ENST00000524330 TMX1Q9H3N1 280 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms