RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 TNPO1Q92973 898 aaKnown RBP13.43□□□□□ -0.26
CLN8-207ENST00000524258 LRCH3Q96II8 777 aa13.43□□□□□ -0.26
CLN8-207ENST00000524258 CDHR5Q9HBB8 845 aa13.43□□□□□ -0.26
CLN8-207ENST00000524258 NRBP2Q9NSY0 501 aa13.43□□□□□ -0.26
CLN8-207ENST00000524258 KDM3AQ9Y4C1 1321 aa13.42□□□□□ -0.26
CLN8-207ENST00000524258 MYH9P35579 1960 aaKnown RBP13.42□□□□□ -0.26
CLN8-207ENST00000524258 CTSHP09668 335 aa13.42□□□□□ -0.26
CLN8-207ENST00000524258 PDCP20941 246 aa13.42□□□□□ -0.26
CLN8-207ENST00000524258 FXR2P51116 673 aaKnown RBP eCLIP13.42□□□□□ -0.26
CLN8-207ENST00000524258 NPEPPSP55786 919 aa13.42□□□□□ -0.26
CLN8-207ENST00000524258 ATP2C1P98194 919 aaPredicted RBP13.42□□□□□ -0.26
CLN8-207ENST00000524258 GNL2Q13823 731 aaKnown RBP13.42□□□□□ -0.26
CLN8-207ENST00000524258 CTTNQ14247 550 aaKnown RBP13.42□□□□□ -0.26
CLN8-207ENST00000524258 OTOP2Q7RTS6 562 aa13.42□□□□□ -0.26
CLN8-207ENST00000524258 TRMT1LQ7Z2T5 733 aaKnown RBP13.42□□□□□ -0.26
CLN8-207ENST00000524258 CKAP2LQ8IYA6 745 aa13.42□□□□□ -0.26
CLN8-207ENST00000524258 NME8Q8N427 588 aa13.42□□□□□ -0.26
CLN8-207ENST00000524258 IGSF22Q8N9C0 903 aa13.42□□□□□ -0.26
CLN8-207ENST00000524258 RNPC3Q96LT9 517 aaKnown RBP13.42□□□□□ -0.26
CLN8-207ENST00000524258 SH2D3AQ9BRG2 576 aa13.42□□□□□ -0.26
CLN8-207ENST00000524258 LXNQ9BS40 222 aa13.42□□□□□ -0.26
CLN8-207ENST00000524258 NOL7Q9UMY1 257 aaKnown RBP13.42□□□□□ -0.26
CLN8-207ENST00000524258 DDX11L8A8MPP1 907 aa13.41□□□□□ -0.26
CLN8-207ENST00000524258 MAGEB2O15479 319 aa13.41□□□□□ -0.26
CLN8-207ENST00000524258 GPR32O75388 356 aa13.41□□□□□ -0.26
CLN8-207ENST00000524258 MED24O75448 989 aa13.41□□□□□ -0.26
CLN8-207ENST00000524258 PRPHP41219 470 aa13.41□□□□□ -0.26
CLN8-207ENST00000524258 TECP42680 631 aa13.41□□□□□ -0.26
CLN8-207ENST00000524258 MRPS6P82932 125 aaKnown RBP13.41□□□□□ -0.26
CLN8-207ENST00000524258 CYP4A11Q02928 519 aa13.41□□□□□ -0.26
CLN8-207ENST00000524258 DRP2Q13474 957 aa13.41□□□□□ -0.26
CLN8-207ENST00000524258 LPIN1Q14693 890 aa13.41□□□□□ -0.26
CLN8-207ENST00000524258 ECM1Q16610 540 aa13.41□□□□□ -0.26
CLN8-207ENST00000524258 FBXO47Q5MNV8 452 aa13.41□□□□□ -0.26
CLN8-207ENST00000524258 PLA2G4FQ68DD2 849 aa13.41□□□□□ -0.26
CLN8-207ENST00000524258 CNKSR3Q6P9H4 555 aa13.41□□□□□ -0.26
CLN8-207ENST00000524258 BRAPQ7Z569 592 aa13.41□□□□□ -0.26
CLN8-207ENST00000524258 FERMT3Q86UX7 667 aa13.41□□□□□ -0.26
CLN8-207ENST00000524258 CATSPER3Q86XQ3 398 aa13.41□□□□□ -0.26
CLN8-207ENST00000524258 HSCBQ8IWL3 235 aa13.41□□□□□ -0.26
CLN8-207ENST00000524258 DBF4BQ8NFT6 615 aa13.41□□□□□ -0.26
CLN8-207ENST00000524258 POLR3CQ9BUI4 534 aaPredicted RBP13.41□□□□□ -0.26
CLN8-207ENST00000524258 FAM49AQ9H0Q0 323 aaPredicted RBP13.41□□□□□ -0.26
CLN8-207ENST00000524258 ADAMTS10Q9H324 1103 aa13.41□□□□□ -0.26
CLN8-207ENST00000524258 ZSWIM4Q9H7M6 989 aa13.41□□□□□ -0.26
CLN8-207ENST00000524258 AGO3Q9H9G7 860 aaKnown RBP13.41□□□□□ -0.26
CLN8-207ENST00000524258 CHD7Q9P2D1 2997 aa13.41□□□□□ -0.26
CLN8-207ENST00000524258 CDY2AQ9Y6F7 541 aa13.41□□□□□ -0.26
CLN8-207ENST00000524258 A0A087WWV3 80 aa13.4□□□□□ -0.26
CLN8-207ENST00000524258 GRXCR1A8MXD5 290 aa13.4□□□□□ -0.26
CLN8-207ENST00000524258 MARCH6O60337 910 aa13.4□□□□□ -0.26
CLN8-207ENST00000524258 MAFO75444 373 aaPredicted RBP13.4□□□□□ -0.26
CLN8-207ENST00000524258 RPLP2P05387 115 aaKnown RBP13.4□□□□□ -0.26
CLN8-207ENST00000524258 CLCN3P51790 818 aa13.4□□□□□ -0.26
CLN8-207ENST00000524258 SMAD3P84022 425 aaKnown RBP13.4□□□□□ -0.26
CLN8-207ENST00000524258 PDIA5Q14554 519 aa13.4□□□□□ -0.26
CLN8-207ENST00000524258 EFCAB12Q6NXP0 572 aa13.4□□□□□ -0.26
CLN8-207ENST00000524258 FAM173BQ6P4H8 233 aa13.4□□□□□ -0.26
CLN8-207ENST00000524258 LRRC71Q8N4P6 559 aa13.4□□□□□ -0.26
CLN8-207ENST00000524258 NEK9Q8TD19 979 aa13.4□□□□□ -0.26
CLN8-207ENST00000524258 TMEM40Q8WWA1 233 aa13.4□□□□□ -0.26
CLN8-207ENST00000524258 MMTAG2Q9BU76 263 aaKnown RBP13.4□□□□□ -0.26
CLN8-207ENST00000524258 CELF4Q9BZC1 486 aaKnown RBP13.4□□□□□ -0.26
CLN8-207ENST00000524258 DHX33Q9H6R0 707 aaKnown RBP13.4□□□□□ -0.26
CLN8-207ENST00000524258 CYP26B1Q9NR63 512 aa13.4□□□□□ -0.26
CLN8-207ENST00000524258 CEP131Q9UPN4 1083 aa13.4□□□□□ -0.26
CLN8-207ENST00000524258 SQORQ9Y6N5 450 aa13.4□□□□□ -0.26
CLN8-207ENST00000524258 SIP14410 1827 aa13.4□□□□□ -0.26
CLN8-207ENST00000524258 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.39□□□□□ -0.27
CLN8-207ENST00000524258 VPS37CA5D8V6 355 aaPredicted RBP13.39□□□□□ -0.27
CLN8-207ENST00000524258 LAD1O00515 517 aa13.39□□□□□ -0.27
CLN8-207ENST00000524258 STX6O43752 255 aa13.39□□□□□ -0.27
CLN8-207ENST00000524258 BAIAP3O94812 1187 aa13.39□□□□□ -0.27
CLN8-207ENST00000524258 GHRP10912 638 aa13.39□□□□□ -0.27
CLN8-207ENST00000524258 RPA1P27694 616 aa13.39□□□□□ -0.27
CLN8-207ENST00000524258 YWHABP31946 246 aaKnown RBP13.39□□□□□ -0.27
CLN8-207ENST00000524258 WDR5P61964 334 aaKnown RBP13.39□□□□□ -0.27
CLN8-207ENST00000524258 TMEM62Q0P6H9 643 aa13.39□□□□□ -0.27
CLN8-207ENST00000524258 PTPAQ15257 358 aa13.39□□□□□ -0.27
CLN8-207ENST00000524258 MTERF2Q49AM1 385 aa13.39□□□□□ -0.27
CLN8-207ENST00000524258 RSPH3Q86UC2 560 aa13.39□□□□□ -0.27
CLN8-207ENST00000524258 TPH2Q8IWU9 490 aa13.39□□□□□ -0.27
CLN8-207ENST00000524258 FTOQ9C0B1 505 aaKnown RBP eCLIP13.39□□□□□ -0.27
CLN8-207ENST00000524258 TUFT1Q9NNX1 390 aa13.39□□□□□ -0.27
CLN8-207ENST00000524258 XPNPEP1Q9NQW7 623 aa13.39□□□□□ -0.27
CLN8-207ENST00000524258 SEPT9Q9UHD8 586 aaPredicted RBP13.39□□□□□ -0.27
CLN8-207ENST00000524258 TRPV2Q9Y5S1 764 aa13.39□□□□□ -0.27
CLN8-207ENST00000524258 EVPLQ92817 2033 aa13.39□□□□□ -0.27
CLN8-207ENST00000524258 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.38□□□□□ -0.27
CLN8-207ENST00000524258 ABHD14A-ACY1A0A1B0GW23 586 aa13.38□□□□□ -0.27
CLN8-207ENST00000524258 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.38□□□□□ -0.27
CLN8-207ENST00000524258 PP2D1A8MPX8 630 aa13.38□□□□□ -0.27
CLN8-207ENST00000524258 DKC1O60832 514 aaKnown RBP eCLIP13.38□□□□□ -0.27
CLN8-207ENST00000524258 VTNP04004 478 aa13.38□□□□□ -0.27
CLN8-207ENST00000524258 XRCC6P12956 609 aaKnown RBP eCLIP13.38□□□□□ -0.27
CLN8-207ENST00000524258 DEFB103AP81534 67 aa13.38□□□□□ -0.27
CLN8-207ENST00000524258 IER5Q5VY09 327 aa13.38□□□□□ -0.27
CLN8-207ENST00000524258 GPR153Q6NV75 609 aa13.38□□□□□ -0.27
CLN8-207ENST00000524258 RTN4RL1Q86UN2 441 aaPredicted RBP13.38□□□□□ -0.27
CLN8-207ENST00000524258 CRIPAKQ8N1N5 446 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms