RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 TMEM127O75204 238 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 PDGFRAP16234 1089 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 XPAP23025 273 aaPredicted RBP7.1□□□□□ -1.27
SDC2-208ENST00000523877 TARSP26639 723 aaKnown RBP7.1□□□□□ -1.27
SDC2-208ENST00000523877 ACTN2P35609 894 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 PSMC2P35998 433 aaKnown RBP7.1□□□□□ -1.27
SDC2-208ENST00000523877 HADHAP40939 763 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 TUFMP49411 452 aaKnown RBP7.1□□□□□ -1.27
SDC2-208ENST00000523877 PRSS12P56730 875 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 CCNA1P78396 465 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 NIPAL4Q0D2K0 466 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 FAM69CQ0P6D2 419 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 Q3ZCU0 254 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 CEP85LQ5SZL2 805 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 TMTC4Q5T4D3 741 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 KANK4Q5T7N3 995 aaPredicted RBP7.1□□□□□ -1.27
SDC2-208ENST00000523877 FAM102BQ5T8I3 360 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 GKAP1Q5VSY0 366 aaPredicted RBP7.1□□□□□ -1.27
SDC2-208ENST00000523877 NEPROQ6NW34 567 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 TLDC1Q6P9B6 456 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 KDELC2Q7Z4H8 507 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 VSIG1Q86XK7 387 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 CCDC155Q8N6L0 562 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 OR6P1Q8NGX9 317 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 CAGE1Q8TC20 777 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 SLC22A8Q8TCC7 542 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 SHC3Q92529 594 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 KIFAP3Q92845 792 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 FERMT2Q96AC1 680 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 SPDL1Q96EA4 605 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 CDCA7LQ96GN5 454 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 LRCH3Q96II8 777 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 CABS1Q96KC9 395 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 NLRP4Q96MN2 994 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 DEPDC7Q96QD5 511 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 PRPF18Q99633 342 aaKnown RBP7.1□□□□□ -1.27
SDC2-208ENST00000523877 PI4K2AQ9BTU6 479 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 SARGQ9BW04 601 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 FAM126AQ9BYI3 521 aaPredicted RBP7.1□□□□□ -1.27
SDC2-208ENST00000523877 B3GNT4Q9C0J1 378 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 LMAN2LQ9H0V9 348 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 VPS16Q9H269 839 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 SLC39A1Q9NY26 324 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 R3HDM2Q9Y2K5 976 aaKnown RBP7.1□□□□□ -1.27
SDC2-208ENST00000523877 SH3GLB1Q9Y371 365 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 SLC4A7Q9Y6M7 1214 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.1□□□□□ -1.27
SDC2-208ENST00000523877 TNIKQ9UKE5 1360 aa7.09□□□□□ -1.27
SDC2-208ENST00000523877 CEP170Q5SW79 1584 aa7.09□□□□□ -1.27
SDC2-208ENST00000523877 GOLGA8SH3BPF8 625 aa7.09□□□□□ -1.27
SDC2-208ENST00000523877 STMND1H3BQB6 276 aa7.09□□□□□ -1.27
SDC2-208ENST00000523877 MASP2O00187 686 aa7.09□□□□□ -1.27
SDC2-208ENST00000523877 E2F3O00716 465 aa7.09□□□□□ -1.27
SDC2-208ENST00000523877 POLR2DO15514 142 aaKnown RBP7.09□□□□□ -1.27
SDC2-208ENST00000523877 KCNQ2O43526 872 aa7.09□□□□□ -1.27
SDC2-208ENST00000523877 SPOPO43791 374 aa7.09□□□□□ -1.27
SDC2-208ENST00000523877 DKC1O60832 514 aaKnown RBP eCLIP7.09□□□□□ -1.27
SDC2-208ENST00000523877 DNAJC8O75937 253 aaPredicted RBP7.09□□□□□ -1.27
SDC2-208ENST00000523877 POP4O95707 220 aaKnown RBP7.09□□□□□ -1.27
SDC2-208ENST00000523877 ATP5BP06576 529 aaKnown RBP7.09□□□□□ -1.27
SDC2-208ENST00000523877 P4HBP07237 508 aaKnown RBP7.09□□□□□ -1.27
SDC2-208ENST00000523877 FDX1P10109 184 aa7.09□□□□□ -1.27
SDC2-208ENST00000523877 EZRP15311 586 aaKnown RBP7.09□□□□□ -1.27
SDC2-208ENST00000523877 IL32P24001 234 aa7.09□□□□□ -1.27
SDC2-208ENST00000523877 EVI2BP34910 448 aa7.09□□□□□ -1.27
SDC2-208ENST00000523877 PTGS2P35354 604 aa7.09□□□□□ -1.27
SDC2-208ENST00000523877 MTIF2P46199 727 aaKnown RBP7.09□□□□□ -1.27
SDC2-208ENST00000523877 TM4SF4P48230 202 aa7.09□□□□□ -1.27
SDC2-208ENST00000523877 PLCD1P51178 756 aa7.09□□□□□ -1.27
SDC2-208ENST00000523877 GPC3P51654 580 aa7.09□□□□□ -1.27
SDC2-208ENST00000523877 AP3M2P53677 418 aa7.09□□□□□ -1.27
SDC2-208ENST00000523877 PMS1P54277 932 aaKnown RBP7.09□□□□□ -1.27
SDC2-208ENST00000523877 VCPP55072 806 aaKnown RBP7.09□□□□□ -1.27
SDC2-208ENST00000523877 HAND2P61296 217 aa7.09□□□□□ -1.27
SDC2-208ENST00000523877 TRIM32Q13049 653 aa7.09□□□□□ -1.27
SDC2-208ENST00000523877 FKBP5Q13451 457 aaPredicted RBP7.09□□□□□ -1.27
SDC2-208ENST00000523877 SMAD4Q13485 552 aaKnown RBP7.09□□□□□ -1.27
SDC2-208ENST00000523877 FRG1Q14331 258 aaKnown RBP7.09□□□□□ -1.27
SDC2-208ENST00000523877 SPCS2Q15005 226 aa7.09□□□□□ -1.27
SDC2-208ENST00000523877 RAB3GAP1Q15042 981 aa7.09□□□□□ -1.27
SDC2-208ENST00000523877 CEP55Q53EZ4 464 aa7.09□□□□□ -1.27
SDC2-208ENST00000523877 DCAF17Q5H9S7 520 aaPredicted RBP7.09□□□□□ -1.27
SDC2-208ENST00000523877 FAM26DQ5JW98 314 aa7.09□□□□□ -1.27
SDC2-208ENST00000523877 TRAPPC3LQ5T215 181 aa7.09□□□□□ -1.27
SDC2-208ENST00000523877 TPGS2Q68CL5 300 aa7.09□□□□□ -1.27
SDC2-208ENST00000523877 B3GNT6Q6ZMB0 384 aa7.09□□□□□ -1.27
SDC2-208ENST00000523877 SPOCD1Q6ZMY3 1216 aa7.09□□□□□ -1.27
SDC2-208ENST00000523877 CLEC17AQ6ZS10 378 aa7.09□□□□□ -1.27
SDC2-208ENST00000523877 STK32CQ86UX6 486 aa7.09□□□□□ -1.27
SDC2-208ENST00000523877 NKAIN4Q8IVV8 208 aa7.09□□□□□ -1.27
SDC2-208ENST00000523877 FAM20CQ8IXL6 584 aa7.09□□□□□ -1.27
SDC2-208ENST00000523877 SYTL1Q8IYJ3 562 aa7.09□□□□□ -1.27
SDC2-208ENST00000523877 NRSN1Q8IZ57 195 aa7.09□□□□□ -1.27
SDC2-208ENST00000523877 GALNT15Q8N3T1 639 aa7.09□□□□□ -1.27
SDC2-208ENST00000523877 NKAPQ8N5F7 415 aaKnown RBP7.09□□□□□ -1.27
SDC2-208ENST00000523877 SPATA5Q8NB90 893 aa7.09□□□□□ -1.27
SDC2-208ENST00000523877 ARRDC4Q8NCT1 418 aa7.09□□□□□ -1.27
SDC2-208ENST00000523877 SHCBP1Q8NEM2 672 aa7.09□□□□□ -1.27
SDC2-208ENST00000523877 CEP70Q8NHQ1 597 aa7.09□□□□□ -1.27
SDC2-208ENST00000523877 MAGEC3Q8TD91 643 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms