RNA–Protein interactions for RNA: ENST00000523765.1

LAMA4-220, Transcript of laminin subunit alpha 4, humanhuman

TSL 5

Gene LAMA4, Length 1,054 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-220ENST00000523765 MAP1BP46821 2468 aaKnown RBP11.2□□□□□ -0.62
LAMA4-220ENST00000523765 SPEGQ15772 3267 aa11.2□□□□□ -0.62
LAMA4-220ENST00000523765 ASPMQ8IZT6 3477 aa11.2□□□□□ -0.62
LAMA4-220ENST00000523765 C2orf16Q68DN1 1984 aa11.2□□□□□ -0.62
LAMA4-220ENST00000523765 A0A0D9SFI3 127 aa11.2□□□□□ -0.62
LAMA4-220ENST00000523765 SPATA31C2B4DYI2 1134 aa11.2□□□□□ -0.62
LAMA4-220ENST00000523765 DHX16O60231 1041 aaKnown RBP11.2□□□□□ -0.62
LAMA4-220ENST00000523765 LMNAP02545 664 aaKnown RBP11.2□□□□□ -0.62
LAMA4-220ENST00000523765 CCND2P30279 289 aa11.2□□□□□ -0.62
LAMA4-220ENST00000523765 IGBP1P78318 339 aa11.2□□□□□ -0.62
LAMA4-220ENST00000523765 PUM1Q14671 1186 aaKnown RBP eCLIP11.2□□□□□ -0.62
LAMA4-220ENST00000523765 GRIK4Q16099 956 aa11.2□□□□□ -0.62
LAMA4-220ENST00000523765 SPOUT1Q5T280 376 aaKnown RBP11.2□□□□□ -0.62
LAMA4-220ENST00000523765 METTL7BQ6UX53 244 aa11.2□□□□□ -0.62
LAMA4-220ENST00000523765 ZNF589Q86UQ0 364 aaPredicted RBP11.2□□□□□ -0.62
LAMA4-220ENST00000523765 FCHSD1Q86WN1 690 aa11.2□□□□□ -0.62
LAMA4-220ENST00000523765 RASGRP4Q8TDF6 673 aa11.2□□□□□ -0.62
LAMA4-220ENST00000523765 CDCA3Q99618 268 aaPredicted RBP11.2□□□□□ -0.62
LAMA4-220ENST00000523765 FAM49AQ9H0Q0 323 aaPredicted RBP11.2□□□□□ -0.62
LAMA4-220ENST00000523765 ERVK-5Q9HDB9 667 aa11.2□□□□□ -0.62
LAMA4-220ENST00000523765 TUBE1Q9UJT0 475 aa11.2□□□□□ -0.62
LAMA4-220ENST00000523765 ACACBO00763 2458 aa11.2□□□□□ -0.62
LAMA4-220ENST00000523765 MBLAC1A4D2B0 266 aaPredicted RBP11.19□□□□□ -0.62
LAMA4-220ENST00000523765 TBKBP1A7MCY6 615 aa11.19□□□□□ -0.62
LAMA4-220ENST00000523765 EIF5BO60841 1220 aaKnown RBP11.19□□□□□ -0.62
LAMA4-220ENST00000523765 UBE3AQ05086 875 aa11.19□□□□□ -0.62
LAMA4-220ENST00000523765 PPFIA1Q13136 1202 aa11.19□□□□□ -0.62
LAMA4-220ENST00000523765 RSPO4Q2I0M5 234 aaPredicted RBP11.19□□□□□ -0.62
LAMA4-220ENST00000523765 RARS2Q5T160 578 aaKnown RBP11.19□□□□□ -0.62
LAMA4-220ENST00000523765 LRRC55Q6ZSA7 311 aa11.19□□□□□ -0.62
LAMA4-220ENST00000523765 THNSL1Q8IYQ7 743 aa11.19□□□□□ -0.62
LAMA4-220ENST00000523765 CYP2W1Q8TAV3 490 aa11.19□□□□□ -0.62
LAMA4-220ENST00000523765 TRAPPC12Q8WVT3 735 aa11.19□□□□□ -0.62
LAMA4-220ENST00000523765 GPATCH3Q96I76 525 aa11.19□□□□□ -0.62
LAMA4-220ENST00000523765 INPP4AQ96PE3 977 aaPredicted RBP11.19□□□□□ -0.62
LAMA4-220ENST00000523765 TCF25Q9BQ70 676 aa11.19□□□□□ -0.62
LAMA4-220ENST00000523765 ADAM7Q9H2U9 754 aa11.19□□□□□ -0.62
LAMA4-220ENST00000523765 PCDHB12Q9Y5F1 795 aa11.19□□□□□ -0.62
LAMA4-220ENST00000523765 HCFC2Q9Y5Z7 792 aa11.19□□□□□ -0.62
LAMA4-220ENST00000523765 OTOGLQ3ZCN5 2332 aa11.19□□□□□ -0.62
LAMA4-220ENST00000523765 CHD8Q9HCK8 2581 aa11.19□□□□□ -0.62
LAMA4-220ENST00000523765 GSTTP1A0A1W2PQM5 241 aa11.18□□□□□ -0.62
LAMA4-220ENST00000523765 NARSO43776 548 aaKnown RBP11.18□□□□□ -0.62
LAMA4-220ENST00000523765 ATP9AO75110 1047 aa11.18□□□□□ -0.62
LAMA4-220ENST00000523765 STAG3L1P0CL83 205 aa11.18□□□□□ -0.62
LAMA4-220ENST00000523765 FGFR1P11362 822 aa11.18□□□□□ -0.62
LAMA4-220ENST00000523765 TCF7P36402 384 aaPredicted RBP11.18□□□□□ -0.62
LAMA4-220ENST00000523765 EMP3P54852 163 aa11.18□□□□□ -0.62
LAMA4-220ENST00000523765 TAF2Q6P1X5 1199 aa11.18□□□□□ -0.62
LAMA4-220ENST00000523765 CHD1LQ86WJ1 897 aa11.18□□□□□ -0.62
LAMA4-220ENST00000523765 SKAP1Q86WV1 359 aa11.18□□□□□ -0.62
LAMA4-220ENST00000523765 SIX5Q8N196 739 aa11.18□□□□□ -0.62
LAMA4-220ENST00000523765 MRPS27Q92552 414 aaKnown RBP11.18□□□□□ -0.62
LAMA4-220ENST00000523765 MTMR8Q96EF0 704 aa11.18□□□□□ -0.62
LAMA4-220ENST00000523765 AMNQ9BXJ7 453 aa11.18□□□□□ -0.62
LAMA4-220ENST00000523765 DCTPP1Q9H773 170 aa11.18□□□□□ -0.62
LAMA4-220ENST00000523765 CDHR5Q9HBB8 845 aa11.18□□□□□ -0.62
LAMA4-220ENST00000523765 ENTPD7Q9NQZ7 604 aa11.18□□□□□ -0.62
LAMA4-220ENST00000523765 ZNF215Q9UL58 517 aaPredicted RBP11.18□□□□□ -0.62
LAMA4-220ENST00000523765 LRFN2Q9ULH4 789 aa11.18□□□□□ -0.62
LAMA4-220ENST00000523765 ZZEF1O43149 2961 aa11.17□□□□□ -0.62
LAMA4-220ENST00000523765 FRMPD4Q14CM0 1322 aa11.17□□□□□ -0.62
LAMA4-220ENST00000523765 TTC41PQ6P2S7 1318 aa11.17□□□□□ -0.62
LAMA4-220ENST00000523765 IGSF9BQ9UPX0 1349 aa11.17□□□□□ -0.62
LAMA4-220ENST00000523765 TPRP12270 2363 aaKnown RBP11.17□□□□□ -0.62
LAMA4-220ENST00000523765 HOXB1P14653 301 aaPredicted RBP11.17□□□□□ -0.62
LAMA4-220ENST00000523765 HOXB8P17481 243 aaPredicted RBP11.17□□□□□ -0.62
LAMA4-220ENST00000523765 SARSP49591 514 aaKnown RBP11.17□□□□□ -0.62
LAMA4-220ENST00000523765 PAK2Q13177 524 aa11.17□□□□□ -0.62
LAMA4-220ENST00000523765 NEDD9Q14511 834 aa11.17□□□□□ -0.62
LAMA4-220ENST00000523765 ASPRV1Q53RT3 343 aa11.17□□□□□ -0.62
LAMA4-220ENST00000523765 MFSD6Q6ZSS7 791 aa11.17□□□□□ -0.62
LAMA4-220ENST00000523765 DGKHQ86XP1 1220 aa11.17□□□□□ -0.62
LAMA4-220ENST00000523765 ZDHHC14Q8IZN3 488 aa11.17□□□□□ -0.62
LAMA4-220ENST00000523765 ENAHQ8N8S7 591 aaPredicted RBP11.17□□□□□ -0.62
LAMA4-220ENST00000523765 TMC2Q8TDI7 906 aa11.17□□□□□ -0.62
LAMA4-220ENST00000523765 HS3ST6Q96QI5 342 aa11.17□□□□□ -0.62
LAMA4-220ENST00000523765 PCYT2Q99447 389 aa11.17□□□□□ -0.62
LAMA4-220ENST00000523765 FTHL17Q9BXU8 183 aa11.17□□□□□ -0.62
LAMA4-220ENST00000523765 UPF2Q9HAU5 1272 aaKnown RBP11.17□□□□□ -0.62
LAMA4-220ENST00000523765 RNF19AQ9NV58 838 aa11.17□□□□□ -0.62
LAMA4-220ENST00000523765 NOC2LQ9Y3T9 749 aaKnown RBP11.17□□□□□ -0.62
LAMA4-220ENST00000523765 PCDHA1Q9Y5I3 950 aa11.17□□□□□ -0.62
LAMA4-220ENST00000523765 TRPV2Q9Y5S1 764 aa11.17□□□□□ -0.62
LAMA4-220ENST00000523765 BAZ2BQ9UIF8 2168 aaKnown RBP11.17□□□□□ -0.62
LAMA4-220ENST00000523765 CACNA1GO43497 2377 aa11.17□□□□□ -0.62
LAMA4-220ENST00000523765 KRBA1A5PL33 1030 aa11.16□□□□□ -0.62
LAMA4-220ENST00000523765 TRIM6-TRIM34B2RNG4 842 aa11.16□□□□□ -0.62
LAMA4-220ENST00000523765 CLASP2O75122 1294 aaKnown RBP11.16□□□□□ -0.62
LAMA4-220ENST00000523765 PARP1P09874 1014 aaKnown RBP11.16□□□□□ -0.62
LAMA4-220ENST00000523765 INSRRP14616 1297 aa11.16□□□□□ -0.62
LAMA4-220ENST00000523765 EPCAMP16422 314 aa11.16□□□□□ -0.62
LAMA4-220ENST00000523765 RSPH3Q86UC2 560 aa11.16□□□□□ -0.62
LAMA4-220ENST00000523765 HOMER1Q86YM7 354 aa11.16□□□□□ -0.62
LAMA4-220ENST00000523765 TDRD5Q8NAT2 981 aaKnown RBP11.16□□□□□ -0.62
LAMA4-220ENST00000523765 TMEM40Q8WWA1 233 aa11.16□□□□□ -0.62
LAMA4-220ENST00000523765 AUTS2Q8WXX7 1259 aa11.16□□□□□ -0.62
LAMA4-220ENST00000523765 PIGSQ96S52 555 aa11.16□□□□□ -0.62
LAMA4-220ENST00000523765 HINFPQ9BQA5 517 aa11.16□□□□□ -0.62
LAMA4-220ENST00000523765 KRTAP3-3Q9BYR6 98 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms