RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-208ENST00000520580 F8W735 103 aaPredicted RBP4.4□□□□□ -1.71
SREK1-208ENST00000520580 RHOBTB3O94955 611 aa4.4□□□□□ -1.71
SREK1-208ENST00000520580 COL6A1P12109 1028 aa4.4□□□□□ -1.71
SREK1-208ENST00000520580 BMP3P12645 472 aa4.4□□□□□ -1.71
SREK1-208ENST00000520580 KIR3DL1P43629 444 aa4.4□□□□□ -1.71
SREK1-208ENST00000520580 CACNB3P54284 484 aa4.4□□□□□ -1.71
SREK1-208ENST00000520580 TOMM20Q15388 145 aa4.4□□□□□ -1.71
SREK1-208ENST00000520580 PDCD2Q16342 344 aaPredicted RBP4.4□□□□□ -1.71
SREK1-208ENST00000520580 ANO6Q4KMQ2 910 aa4.4□□□□□ -1.71
SREK1-208ENST00000520580 FAM209BQ5JX69 171 aa4.4□□□□□ -1.71
SREK1-208ENST00000520580 DUSP27Q5VZP5 1158 aa4.4□□□□□ -1.71
SREK1-208ENST00000520580 SEZ6L2Q6UXD5 910 aa4.4□□□□□ -1.71
SREK1-208ENST00000520580 UNQ6494/PRO21346Q6UXR6 183 aa4.4□□□□□ -1.71
SREK1-208ENST00000520580 OTOP3Q7RTS5 596 aa4.4□□□□□ -1.71
SREK1-208ENST00000520580 DAAM2Q86T65 1068 aa4.4□□□□□ -1.71
SREK1-208ENST00000520580 KIAA0319LQ8IZA0 1049 aa4.4□□□□□ -1.71
SREK1-208ENST00000520580 OXR1Q8N573 874 aa4.4□□□□□ -1.71
SREK1-208ENST00000520580 ENOX1Q8TC92 643 aaKnown RBP4.4□□□□□ -1.71
SREK1-208ENST00000520580 NSUN6Q8TEA1 469 aaKnown RBP4.4□□□□□ -1.71
SREK1-208ENST00000520580 UBL7Q96S82 380 aaPredicted RBP4.4□□□□□ -1.71
SREK1-208ENST00000520580 PLVAPQ9BX97 442 aa4.4□□□□□ -1.71
SREK1-208ENST00000520580 DUSP15Q9H1R2 295 aaPredicted RBP4.4□□□□□ -1.71
SREK1-208ENST00000520580 KCNF1Q9H3M0 494 aa4.4□□□□□ -1.71
SREK1-208ENST00000520580 KCNG1Q9UIX4 513 aa4.4□□□□□ -1.71
SREK1-208ENST00000520580 USP21Q9UK80 565 aa4.4□□□□□ -1.71
SREK1-208ENST00000520580 SRPK3Q9UPE1 567 aa4.4□□□□□ -1.71
SREK1-208ENST00000520580 RWDD3Q9Y3V2 267 aa4.4□□□□□ -1.71
SREK1-208ENST00000520580 B3GALT1Q9Y5Z6 326 aa4.4□□□□□ -1.71
SREK1-208ENST00000520580 FAM95CA0A1B0GW59 222 aa4.39□□□□□ -1.71
SREK1-208ENST00000520580 CAPN8A6NHC0 703 aa4.39□□□□□ -1.71
SREK1-208ENST00000520580 CCDC154A6NI56 674 aa4.39□□□□□ -1.71
SREK1-208ENST00000520580 C22orf46C9J442 243 aa4.39□□□□□ -1.71
SREK1-208ENST00000520580 DTNBO60941 627 aa4.39□□□□□ -1.71
SREK1-208ENST00000520580 CYP17A1P05093 508 aa4.39□□□□□ -1.71
SREK1-208ENST00000520580 PYGLP06737 847 aa4.39□□□□□ -1.71
SREK1-208ENST00000520580 CCT5P48643 541 aa4.39□□□□□ -1.71
SREK1-208ENST00000520580 LGALS4P56470 323 aa4.39□□□□□ -1.71
SREK1-208ENST00000520580 C3orf36Q3SXR2 165 aa4.39□□□□□ -1.71
SREK1-208ENST00000520580 CCDC38Q502W7 563 aa4.39□□□□□ -1.71
SREK1-208ENST00000520580 ZZZ3Q8IYH5 903 aa4.39□□□□□ -1.71
SREK1-208ENST00000520580 PRR18Q8N4B5 295 aa4.39□□□□□ -1.71
SREK1-208ENST00000520580 SPATA5Q8NB90 893 aa4.39□□□□□ -1.71
SREK1-208ENST00000520580 LRTOMTQ8WZ04 291 aa4.39□□□□□ -1.71
SREK1-208ENST00000520580 YIPF2Q9BWQ6 316 aa4.39□□□□□ -1.71
SREK1-208ENST00000520580 ACSS2Q9NR19 701 aa4.39□□□□□ -1.71
SREK1-208ENST00000520580 SMC4Q9NTJ3 1288 aa4.39□□□□□ -1.71
SREK1-208ENST00000520580 ZNF69Q9UC07 566 aa4.39□□□□□ -1.71
SREK1-208ENST00000520580 STAP2Q9UGK3 403 aa4.39□□□□□ -1.71
SREK1-208ENST00000520580 MAGED2Q9UNF1 606 aaPredicted RBP4.39□□□□□ -1.71
SREK1-208ENST00000520580 GPR52Q9Y2T5 361 aa4.39□□□□□ -1.71
SREK1-208ENST00000520580 NR2E3Q9Y5X4 410 aa4.39□□□□□ -1.71
SREK1-208ENST00000520580 PRSS38A1L453 326 aa4.39□□□□□ -1.71
SREK1-208ENST00000520580 FAM155AB1AL88 458 aaPredicted RBP4.39□□□□□ -1.71
SREK1-208ENST00000520580 ELL2O00472 640 aaPredicted RBP4.39□□□□□ -1.71
SREK1-208ENST00000520580 DDX3XO00571 662 aaKnown RBP eCLIP4.39□□□□□ -1.71
SREK1-208ENST00000520580 FUCA1P04066 466 aa4.39□□□□□ -1.71
SREK1-208ENST00000520580 EDNRBP24530 442 aa4.39□□□□□ -1.71
SREK1-208ENST00000520580 RPL10P27635 214 aaKnown RBP4.39□□□□□ -1.71
SREK1-208ENST00000520580 DUSP4Q13115 394 aa4.39□□□□□ -1.71
SREK1-208ENST00000520580 KCTD2Q14681 263 aa4.39□□□□□ -1.71
SREK1-208ENST00000520580 CATSPEREQ5SY80 951 aa4.39□□□□□ -1.71
SREK1-208ENST00000520580 MBNL2Q5VZF2 373 aaKnown RBP4.39□□□□□ -1.71
SREK1-208ENST00000520580 C7orf31Q8N865 590 aa4.39□□□□□ -1.71
SREK1-208ENST00000520580 DPF2Q92785 391 aa4.39□□□□□ -1.71
SREK1-208ENST00000520580 C16orf92Q96LL3 132 aa4.39□□□□□ -1.71
SREK1-208ENST00000520580 NUP62CLQ9H1M0 184 aa4.39□□□□□ -1.71
SREK1-208ENST00000520580 C14orf93Q9H972 538 aaKnown RBP4.39□□□□□ -1.71
SREK1-208ENST00000520580 RIC8BQ9NVN3 520 aa4.39□□□□□ -1.71
SREK1-208ENST00000520580 CAPN6Q9Y6Q1 641 aa4.39□□□□□ -1.71
SREK1-208ENST00000520580 PRAMEF25A6NGN4 478 aa4.38□□□□□ -1.71
SREK1-208ENST00000520580 hCG_1984214I3L0E3 225 aa4.38□□□□□ -1.71
SREK1-208ENST00000520580 M0R3H8 397 aa4.38□□□□□ -1.71
SREK1-208ENST00000520580 MGEA5O60502 916 aa4.38□□□□□ -1.71
SREK1-208ENST00000520580 TLR5O60602 858 aa4.38□□□□□ -1.71
SREK1-208ENST00000520580 PPP1R11O60927 126 aaPredicted RBP4.38□□□□□ -1.71
SREK1-208ENST00000520580 RNASEH2AO75792 299 aaKnown RBP4.38□□□□□ -1.71
SREK1-208ENST00000520580 DGKIO75912 1065 aa4.38□□□□□ -1.71
SREK1-208ENST00000520580 HOXB4P17483 251 aaPredicted RBP4.38□□□□□ -1.71
SREK1-208ENST00000520580 GRK6P43250 576 aa4.38□□□□□ -1.71
SREK1-208ENST00000520580 TNFAIP2Q03169 654 aa4.38□□□□□ -1.71
SREK1-208ENST00000520580 TRIM25Q14258 630 aaKnown RBP4.38□□□□□ -1.71
SREK1-208ENST00000520580 ERBB4Q15303 1308 aa4.38□□□□□ -1.71
SREK1-208ENST00000520580 HSF5Q4G112 596 aaPredicted RBP4.38□□□□□ -1.71
SREK1-208ENST00000520580 FIGNQ5HY92 759 aa4.38□□□□□ -1.71
SREK1-208ENST00000520580 SUGP1Q8IWZ8 645 aaKnown RBP4.38□□□□□ -1.71
SREK1-208ENST00000520580 LINC00116Q8NCU8 138 aa4.38□□□□□ -1.71
SREK1-208ENST00000520580 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.38□□□□□ -1.71
SREK1-208ENST00000520580 AUTS2Q8WXX7 1259 aa4.38□□□□□ -1.71
SREK1-208ENST00000520580 EZH1Q92800 747 aaPredicted RBP4.38□□□□□ -1.71
SREK1-208ENST00000520580 COX4I2Q96KJ9 171 aa4.38□□□□□ -1.71
SREK1-208ENST00000520580 GPR62Q9BZJ7 368 aa4.38□□□□□ -1.71
SREK1-208ENST00000520580 KCTD10Q9H3F6 313 aa4.38□□□□□ -1.71
SREK1-208ENST00000520580 AKTIPQ9H8T0 292 aa4.38□□□□□ -1.71
SREK1-208ENST00000520580 KCNH7Q9NS40 1196 aa4.38□□□□□ -1.71
SREK1-208ENST00000520580 ZSWIM5Q9P217 1185 aa4.38□□□□□ -1.71
SREK1-208ENST00000520580 ATP23Q9Y6H3 246 aa4.38□□□□□ -1.71
SREK1-208ENST00000520580 A0A087WV62 115 aa4.38□□□□□ -1.71
SREK1-208ENST00000520580 TMEM82A0PJX8 343 aa4.38□□□□□ -1.71
SREK1-208ENST00000520580 CCER2I3L3R5 266 aa4.38□□□□□ -1.71
SREK1-208ENST00000520580 HTRA2O43464 458 aaPredicted RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms