RNA–Protein interactions for RNA: ENST00000519607.5

NUDCD1-203, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 2,286 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-203ENST00000519607 ZEB2O60315 1214 aa12.37□□□□□ -0.43
NUDCD1-203ENST00000519607 AKAP3O75969 853 aa12.37□□□□□ -0.43
NUDCD1-203ENST00000519607 EYA4O95677 639 aa12.37□□□□□ -0.43
NUDCD1-203ENST00000519607 MYBP10242 640 aa12.37□□□□□ -0.43
NUDCD1-203ENST00000519607 NR1D1P20393 614 aa12.37□□□□□ -0.43
NUDCD1-203ENST00000519607 CRKP46108 304 aa12.37□□□□□ -0.43
NUDCD1-203ENST00000519607 ICA1Q05084 483 aa12.37□□□□□ -0.43
NUDCD1-203ENST00000519607 MTMR3Q13615 1198 aa12.37□□□□□ -0.43
NUDCD1-203ENST00000519607 TMEM179Q6ZVK1 233 aa12.37□□□□□ -0.43
NUDCD1-203ENST00000519607 STXBP4Q6ZWJ1 553 aa12.37□□□□□ -0.43
NUDCD1-203ENST00000519607 LRRC57Q8N9N7 239 aa12.37□□□□□ -0.43
NUDCD1-203ENST00000519607 TPCN2Q8NHX9 752 aa12.37□□□□□ -0.43
NUDCD1-203ENST00000519607 BHMT2Q9H2M3 363 aa12.37□□□□□ -0.43
NUDCD1-203ENST00000519607 OLFML3Q9NRN5 406 aa12.37□□□□□ -0.43
NUDCD1-203ENST00000519607 LRRC4BQ9NT99 713 aa12.37□□□□□ -0.43
NUDCD1-203ENST00000519607 SUCLA2Q9P2R7 463 aaPredicted RBP12.37□□□□□ -0.43
NUDCD1-203ENST00000519607 GCOM1H8Y6P7 765 aaPredicted RBP12.37□□□□□ -0.43
NUDCD1-203ENST00000519607 KRIT1O00522 736 aa12.37□□□□□ -0.43
NUDCD1-203ENST00000519607 EIF3DO15371 548 aaKnown RBP eCLIP12.37□□□□□ -0.43
NUDCD1-203ENST00000519607 KIAA0754O94854 1291 aa12.37□□□□□ -0.43
NUDCD1-203ENST00000519607 FAM13AO94988 1023 aa12.37□□□□□ -0.43
NUDCD1-203ENST00000519607 MYZAPP0CAP1 466 aa12.37□□□□□ -0.43
NUDCD1-203ENST00000519607 HMGB2P26583 209 aaKnown RBP12.37□□□□□ -0.43
NUDCD1-203ENST00000519607 ALDH1B1P30837 517 aa12.37□□□□□ -0.43
NUDCD1-203ENST00000519607 CIITAP33076 1130 aa12.37□□□□□ -0.43
NUDCD1-203ENST00000519607 PSMC2P35998 433 aaKnown RBP12.37□□□□□ -0.43
NUDCD1-203ENST00000519607 ATP1A2P50993 1020 aa12.37□□□□□ -0.43
NUDCD1-203ENST00000519607 PDCLQ13371 301 aa12.37□□□□□ -0.43
NUDCD1-203ENST00000519607 DOK7Q18PE1 504 aa12.37□□□□□ -0.43
NUDCD1-203ENST00000519607 USH1GQ495M9 461 aa12.37□□□□□ -0.43
NUDCD1-203ENST00000519607 CEP85LQ5SZL2 805 aa12.37□□□□□ -0.43
NUDCD1-203ENST00000519607 TTC19Q6DKK2 380 aaPredicted RBP12.37□□□□□ -0.43
NUDCD1-203ENST00000519607 RUFY4Q6ZNE9 571 aa12.37□□□□□ -0.43
NUDCD1-203ENST00000519607 DAAM2Q86T65 1068 aa12.37□□□□□ -0.43
NUDCD1-203ENST00000519607 PLAAQ9Y263 795 aa12.37□□□□□ -0.43
NUDCD1-203ENST00000519607 PCDHB13Q9Y5F0 798 aa12.37□□□□□ -0.43
NUDCD1-203ENST00000519607 ANKRD65E5RJM6 399 aa12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 F5H6K3 240 aa12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 POLRMTO00411 1230 aaKnown RBP12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 SART1O43290 800 aaKnown RBP12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 ERLIN2O94905 339 aa12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 CPP00450 1065 aa12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 LMNB1P20700 586 aa12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 HSPA1LP34931 641 aa12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 JAM2P57087 298 aa12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 KLRC3Q07444 240 aa12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 NFIAQ12857 509 aa12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 DPY19L2P1Q6NXN4 242 aa12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 MICALL1Q8N3F8 863 aa12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 SH2D3CQ8N5H7 860 aa12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 GMCL1P1Q8NEA9 526 aa12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 SLC35C1Q96A29 364 aa12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 GMCL1Q96IK5 515 aa12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 ZDHHC15Q96MV8 337 aa12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 EIF2AK1Q9BQI3 630 aaKnown RBP12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 MRIQ9BWK5 157 aa12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 EPN3Q9H201 632 aa12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 SLITRK6Q9H5Y7 841 aa12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 AMFRQ9UKV5 643 aa12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 DIS3Q9Y2L1 958 aaKnown RBP12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 FAM86B1E9PN63 330 aa12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 MSH4O15457 936 aa12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 FAM86B2P0C5J1 330 aa12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 HOXD13P35453 343 aa12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 RBM5P52756 815 aaKnown RBP eCLIP12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 CYP4A11Q02928 519 aa12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 TCP10Q12799 353 aa12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 CLUL1Q15846 466 aa12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 PPP2R5EQ16537 467 aa12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 SLC27A3Q5K4L6 730 aa12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 SYDE2Q5VT97 1194 aa12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 TEX2Q8IWB9 1127 aa12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 METTL13Q8N6R0 699 aa12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 RBM46Q8TBY0 533 aaKnown RBP12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 NOC2LQ9Y3T9 749 aaKnown RBP12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 DAAM1Q9Y4D1 1078 aa12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 ASTN1O14525 1302 aa12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 ATXN2Q99700 1313 aaKnown RBP12.36□□□□□ -0.43
NUDCD1-203ENST00000519607 SRRM3A6NNA2 597 aaPredicted RBP12.35□□□□□ -0.43
NUDCD1-203ENST00000519607 CLIC2O15247 247 aa12.35□□□□□ -0.43
NUDCD1-203ENST00000519607 CYP3A4P08684 503 aa12.35□□□□□ -0.43
NUDCD1-203ENST00000519607 INPP5BP32019 993 aa12.35□□□□□ -0.43
NUDCD1-203ENST00000519607 LSP1P33241 339 aa12.35□□□□□ -0.43
NUDCD1-203ENST00000519607 MMP14P50281 582 aa12.35□□□□□ -0.43
NUDCD1-203ENST00000519607 DDR1Q08345 913 aa12.35□□□□□ -0.43
NUDCD1-203ENST00000519607 NFIL3Q16649 462 aa12.35□□□□□ -0.43
NUDCD1-203ENST00000519607 HS2ST1Q7LGA3 356 aa12.35□□□□□ -0.43
NUDCD1-203ENST00000519607 PODNQ7Z5L7 613 aa12.35□□□□□ -0.43
NUDCD1-203ENST00000519607 SLFN11Q7Z7L1 901 aa12.35□□□□□ -0.43
NUDCD1-203ENST00000519607 FAM186BQ8IYM0 893 aa12.35□□□□□ -0.43
NUDCD1-203ENST00000519607 MYCT1Q8N699 235 aa12.35□□□□□ -0.43
NUDCD1-203ENST00000519607 U2AF1L4Q8WU68 220 aaKnown RBP12.35□□□□□ -0.43
NUDCD1-203ENST00000519607 PIK3R5Q8WYR1 880 aa12.35□□□□□ -0.43
NUDCD1-203ENST00000519607 LENG9Q96B70 501 aa12.35□□□□□ -0.43
NUDCD1-203ENST00000519607 RNPC3Q96LT9 517 aaKnown RBP12.35□□□□□ -0.43
NUDCD1-203ENST00000519607 NAP1L3Q99457 506 aaPredicted RBP12.35□□□□□ -0.43
NUDCD1-203ENST00000519607 MKNK1Q9BUB5 465 aa12.35□□□□□ -0.43
NUDCD1-203ENST00000519607 TUFT1Q9NNX1 390 aa12.35□□□□□ -0.43
NUDCD1-203ENST00000519607 FRMD4BQ9Y2L6 1034 aa12.35□□□□□ -0.43
NUDCD1-203ENST00000519607 UTP11Q9Y3A2 253 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms