RNA–Protein interactions for RNA: ENST00000517857.1

TOP1MT-203, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 2

Gene TOP1MT, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-203ENST00000517857 MYH15Q9Y2K3 1946 aa16.33■□□□□ 0.2
TOP1MT-203ENST00000517857 MAGEB2O15479 319 aa16.32■□□□□ 0.2
TOP1MT-203ENST00000517857 CLCN3P51790 818 aa16.32■□□□□ 0.2
TOP1MT-203ENST00000517857 PTGDRQ13258 359 aa16.32■□□□□ 0.2
TOP1MT-203ENST00000517857 MBTPS1Q14703 1052 aa16.32■□□□□ 0.2
TOP1MT-203ENST00000517857 LRIT3Q3SXY7 679 aa16.32■□□□□ 0.2
TOP1MT-203ENST00000517857 IER5Q5VY09 327 aa16.32■□□□□ 0.2
TOP1MT-203ENST00000517857 CNKSR3Q6P9H4 555 aa16.32■□□□□ 0.2
TOP1MT-203ENST00000517857 TPH2Q8IWU9 490 aa16.32■□□□□ 0.2
TOP1MT-203ENST00000517857 ERMNQ8TAM6 284 aa16.32■□□□□ 0.2
TOP1MT-203ENST00000517857 HERVK_113Q902F9 699 aa16.32■□□□□ 0.2
TOP1MT-203ENST00000517857 CCDC43Q96MW1 224 aaKnown RBP16.32■□□□□ 0.2
TOP1MT-203ENST00000517857 MAP7D2Q96T17 732 aa16.32■□□□□ 0.2
TOP1MT-203ENST00000517857 SH2D3AQ9BRG2 576 aa16.32■□□□□ 0.2
TOP1MT-203ENST00000517857 ZSWIM4Q9H7M6 989 aa16.32■□□□□ 0.2
TOP1MT-203ENST00000517857 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.32■□□□□ 0.2
TOP1MT-203ENST00000517857 TRPV2Q9Y5S1 764 aa16.32■□□□□ 0.2
TOP1MT-203ENST00000517857 MICAL3Q7RTP6 2002 aa16.31■□□□□ 0.2
TOP1MT-203ENST00000517857 GBF1Q92538 1859 aa16.31■□□□□ 0.2
TOP1MT-203ENST00000517857 LAD1O00515 517 aa16.31■□□□□ 0.2
TOP1MT-203ENST00000517857 SOX1O00570 391 aaPredicted RBP16.31■□□□□ 0.2
TOP1MT-203ENST00000517857 CXCL10P02778 98 aa16.31■□□□□ 0.2
TOP1MT-203ENST00000517857 FAM26DQ5JW98 314 aa16.31■□□□□ 0.2
TOP1MT-203ENST00000517857 RPAINQ86UA6 219 aa16.31■□□□□ 0.2
TOP1MT-203ENST00000517857 LRRC71Q8N4P6 559 aa16.31■□□□□ 0.2
TOP1MT-203ENST00000517857 VWCEQ96DN2 955 aa16.31■□□□□ 0.2
TOP1MT-203ENST00000517857 PPP1R16BQ96T49 567 aa16.31■□□□□ 0.2
TOP1MT-203ENST00000517857 RAB34Q9BZG1 259 aa16.31■□□□□ 0.2
TOP1MT-203ENST00000517857 CXXC1Q9P0U4 656 aaPredicted RBP16.31■□□□□ 0.2
TOP1MT-203ENST00000517857 WRAP73Q9P2S5 460 aaPredicted RBP16.31■□□□□ 0.2
TOP1MT-203ENST00000517857 AKT3Q9Y243 479 aa16.31■□□□□ 0.2
TOP1MT-203ENST00000517857 GINS2Q9Y248 185 aa16.31■□□□□ 0.2
TOP1MT-203ENST00000517857 STX6O43752 255 aa16.3■□□□□ 0.2
TOP1MT-203ENST00000517857 CHRNA1P02708 482 aa16.3■□□□□ 0.2
TOP1MT-203ENST00000517857 GHRP10912 638 aa16.3■□□□□ 0.2
TOP1MT-203ENST00000517857 TMOD1P28289 359 aa16.3■□□□□ 0.2
TOP1MT-203ENST00000517857 YWHABP31946 246 aaKnown RBP16.3■□□□□ 0.2
TOP1MT-203ENST00000517857 KCNJ6P48051 423 aa16.3■□□□□ 0.2
TOP1MT-203ENST00000517857 FXR1P51114 621 aaKnown RBP eCLIP16.3■□□□□ 0.2
TOP1MT-203ENST00000517857 MGAT3Q09327 533 aa16.3■□□□□ 0.2
TOP1MT-203ENST00000517857 GPNMBQ14956 572 aa16.3■□□□□ 0.2
TOP1MT-203ENST00000517857 EFCAB12Q6NXP0 572 aa16.3■□□□□ 0.2
TOP1MT-203ENST00000517857 ANO5Q75V66 913 aa16.3■□□□□ 0.2
TOP1MT-203ENST00000517857 OTUD6AQ7L8S5 288 aa16.3■□□□□ 0.2
TOP1MT-203ENST00000517857 C4orf19Q8IY42 314 aa16.3■□□□□ 0.2
TOP1MT-203ENST00000517857 NME8Q8N427 588 aa16.3■□□□□ 0.2
TOP1MT-203ENST00000517857 SEPT8Q92599 483 aa16.3■□□□□ 0.2
TOP1MT-203ENST00000517857 LRCH3Q96II8 777 aa16.3■□□□□ 0.2
TOP1MT-203ENST00000517857 CEP170P1Q96L14 293 aa16.3■□□□□ 0.2
TOP1MT-203ENST00000517857 NIFKQ9BYG3 293 aaKnown RBP16.3■□□□□ 0.2
TOP1MT-203ENST00000517857 SUGCTQ9HAC7 445 aa16.3■□□□□ 0.2
TOP1MT-203ENST00000517857 SLC4A7Q9Y6M7 1214 aa16.3■□□□□ 0.2
TOP1MT-203ENST00000517857 RBAK-RBAKDNI3L0D1 243 aa16.29■□□□□ 0.2
TOP1MT-203ENST00000517857 BAIAP3O94812 1187 aa16.29■□□□□ 0.2
TOP1MT-203ENST00000517857 SLITRK3O94933 977 aa16.29■□□□□ 0.2
TOP1MT-203ENST00000517857 STBD1O95210 358 aa16.29■□□□□ 0.2
TOP1MT-203ENST00000517857 VTNP04004 478 aa16.29■□□□□ 0.2
TOP1MT-203ENST00000517857 FXR2P51116 673 aaKnown RBP eCLIP16.29■□□□□ 0.2
TOP1MT-203ENST00000517857 NPEPPSP55786 919 aa16.29■□□□□ 0.2
TOP1MT-203ENST00000517857 RESTQ13127 1097 aa16.29■□□□□ 0.2
TOP1MT-203ENST00000517857 TARBP2Q15633 366 aaKnown RBP16.29■□□□□ 0.2
TOP1MT-203ENST00000517857 XKR9Q5GH70 373 aa16.29■□□□□ 0.2
TOP1MT-203ENST00000517857 HAUS3Q68CZ6 603 aa16.29■□□□□ 0.2
TOP1MT-203ENST00000517857 DTHD1Q6ZMT9 781 aa16.29■□□□□ 0.2
TOP1MT-203ENST00000517857 C4orf32Q8N8J7 132 aa16.29■□□□□ 0.2
TOP1MT-203ENST00000517857 DBF4BQ8NFT6 615 aa16.29■□□□□ 0.2
TOP1MT-203ENST00000517857 SCLT1Q96NL6 688 aa16.29■□□□□ 0.2
TOP1MT-203ENST00000517857 IFIH1Q9BYX4 1025 aaKnown RBP16.29■□□□□ 0.2
TOP1MT-203ENST00000517857 CELF4Q9BZC1 486 aaKnown RBP16.29■□□□□ 0.2
TOP1MT-203ENST00000517857 CYP26B1Q9NR63 512 aa16.29■□□□□ 0.2
TOP1MT-203ENST00000517857 BMP2KQ9NSY1 1161 aaPredicted RBP16.29■□□□□ 0.2
TOP1MT-203ENST00000517857 LRWD1Q9UFC0 647 aa16.29■□□□□ 0.2
TOP1MT-203ENST00000517857 MTMR6Q9Y217 621 aa16.29■□□□□ 0.2
TOP1MT-203ENST00000517857 PTPRSQ13332 1948 aa16.29■□□□□ 0.2
TOP1MT-203ENST00000517857 PRPHP41219 470 aa16.28■□□□□ 0.2
TOP1MT-203ENST00000517857 POLGP54098 1239 aaPredicted RBP16.28■□□□□ 0.2
TOP1MT-203ENST00000517857 ATP2C1P98194 919 aaPredicted RBP16.28■□□□□ 0.2
TOP1MT-203ENST00000517857 IKBKEQ14164 716 aa16.28■□□□□ 0.2
TOP1MT-203ENST00000517857 LPIN1Q14693 890 aa16.28■□□□□ 0.2
TOP1MT-203ENST00000517857 PLEKHG4Q58EX7 1191 aa16.28■□□□□ 0.2
TOP1MT-203ENST00000517857 RASIP1Q5U651 963 aa16.28■□□□□ 0.2
TOP1MT-203ENST00000517857 KIAA0319LQ8IZA0 1049 aa16.28■□□□□ 0.2
TOP1MT-203ENST00000517857 SLC7A3Q8WY07 619 aa16.28■□□□□ 0.2
TOP1MT-203ENST00000517857 HSD17B14Q9BPX1 270 aa16.28■□□□□ 0.2
TOP1MT-203ENST00000517857 JPH2Q9BR39 696 aaPredicted RBP16.28■□□□□ 0.2
TOP1MT-203ENST00000517857 TUFT1Q9NNX1 390 aa16.28■□□□□ 0.2
TOP1MT-203ENST00000517857 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.27■□□□□ 0.2
TOP1MT-203ENST00000517857 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.27■□□□□ 0.2
TOP1MT-203ENST00000517857 EFCAB14O75071 495 aa16.27■□□□□ 0.2
TOP1MT-203ENST00000517857 MED24O75448 989 aa16.27■□□□□ 0.2
TOP1MT-203ENST00000517857 BMP15O95972 392 aa16.27■□□□□ 0.2
TOP1MT-203ENST00000517857 ATP2A2P16615 1042 aaKnown RBP16.27■□□□□ 0.2
TOP1MT-203ENST00000517857 CCT6AP40227 531 aaKnown RBP16.27■□□□□ 0.2
TOP1MT-203ENST00000517857 DNM2P50570 870 aa16.27■□□□□ 0.2
TOP1MT-203ENST00000517857 BECN1Q14457 450 aa16.27■□□□□ 0.2
TOP1MT-203ENST00000517857 KIZQ2M2Z5 673 aa16.27■□□□□ 0.2
TOP1MT-203ENST00000517857 TCTN1Q2MV58 587 aa16.27■□□□□ 0.2
TOP1MT-203ENST00000517857 FBXO47Q5MNV8 452 aa16.27■□□□□ 0.2
TOP1MT-203ENST00000517857 FOXD4L5Q5VV16 416 aaPredicted RBP16.27■□□□□ 0.2
TOP1MT-203ENST00000517857 FAM109BQ6ICB4 259 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms