RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 NSFP46459 744 aaKnown RBP11.73□□□□□ -0.53
PCDHGA1-202ENST00000517417 E2F5Q15329 346 aa11.73□□□□□ -0.53
PCDHGA1-202ENST00000517417 SESTD1Q86VW0 696 aa11.73□□□□□ -0.53
PCDHGA1-202ENST00000517417 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.73□□□□□ -0.53
PCDHGA1-202ENST00000517417 ORC4O43929 436 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 RPS6KA5O75582 802 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 CARSP49589 748 aaKnown RBP11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 LACTBP83111 547 aaPredicted RBP11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 AMPD2Q01433 879 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 DHX9Q08211 1270 aaKnown RBP11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 SEPT2Q15019 361 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 ATP6V0A1Q93050 837 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 PLCB1Q9NQ66 1216 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 NRBP2Q9NSY0 501 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 CEP72Q9P209 647 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 MRC1P22897 1456 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 LOC102724159A0A0B4J2E5 919 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 LRRC10BA6NIK2 292 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 MYO1FO00160 1098 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 PPP1R37O75864 691 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 SNX16P57768 344 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 PTK2Q05397 1052 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 ITIH3Q06033 890 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 KCTD2Q14681 263 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 PWP2Q15269 919 aaKnown RBP11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 TAOK1Q7L7X3 1001 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 NKX2-3Q8TAU0 364 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 MED15Q96RN5 788 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 ADPGKQ9BRR6 497 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 ATP8A1Q9Y2Q0 1164 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 PTPN22Q9Y2R2 807 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 FAM83BQ5T0W9 1011 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 TTI2Q6NXR4 508 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 NT5C1BQ96P26 610 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 NCAPGQ9BPX3 1015 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 EPN3Q9H201 632 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 ABCC6O95255 1503 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 TNNC2P02585 160 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 CNGA1P29973 690 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 CRKP46108 304 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 PHLDB2Q86SQ0 1253 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 HDAC7Q8WUI4 952 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 MASTLQ96GX5 879 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 PBKQ96KB5 322 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 APOL6Q9BWW8 343 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 ZNF341Q9BYN7 854 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 EHD4Q9H223 541 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 ACTR5Q9H9F9 607 aaPredicted RBP11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 KMT5AQ9NQR1 393 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 ZNF148Q9UQR1 794 aa11.72□□□□□ -0.53
PCDHGA1-202ENST00000517417 A0A1W2PQJ5 194 aa11.71□□□□□ -0.53
PCDHGA1-202ENST00000517417 M0QZ92 97 aa11.71□□□□□ -0.53
PCDHGA1-202ENST00000517417 P4HA1P13674 534 aa11.71□□□□□ -0.53
PCDHGA1-202ENST00000517417 HNRNPH1P31943 449 aaKnown RBP11.71□□□□□ -0.53
PCDHGA1-202ENST00000517417 LSP1P33241 339 aa11.71□□□□□ -0.53
PCDHGA1-202ENST00000517417 SEMA3FQ13275 785 aa11.71□□□□□ -0.53
PCDHGA1-202ENST00000517417 PPP2R5CQ13362 524 aa11.71□□□□□ -0.53
PCDHGA1-202ENST00000517417 CUL1Q13616 776 aa11.71□□□□□ -0.53
PCDHGA1-202ENST00000517417 GRM4Q14833 912 aa11.71□□□□□ -0.53
PCDHGA1-202ENST00000517417 AOC3Q16853 763 aa11.71□□□□□ -0.53
PCDHGA1-202ENST00000517417 ZNF473Q8WTR7 871 aaKnown RBP11.71□□□□□ -0.53
PCDHGA1-202ENST00000517417 RSAD2Q8WXG1 361 aa11.71□□□□□ -0.53
PCDHGA1-202ENST00000517417 NACA2Q9H009 215 aa11.71□□□□□ -0.53
PCDHGA1-202ENST00000517417 PARVGQ9HBI0 331 aa11.71□□□□□ -0.53
PCDHGA1-202ENST00000517417 TMEM260Q9NX78 707 aa11.71□□□□□ -0.53
PCDHGA1-202ENST00000517417 BARHL2Q9NY43 387 aa11.71□□□□□ -0.53
PCDHGA1-202ENST00000517417 GCNT4Q9P109 453 aa11.71□□□□□ -0.53
PCDHGA1-202ENST00000517417 ANAPC4Q9UJX5 808 aa11.71□□□□□ -0.53
PCDHGA1-202ENST00000517417 KIF1AQ12756 1690 aa11.71□□□□□ -0.53
PCDHGA1-202ENST00000517417 USP17L10C9JJH3 530 aa11.71□□□□□ -0.53
PCDHGA1-202ENST00000517417 FGFR2P21802 821 aa11.71□□□□□ -0.53
PCDHGA1-202ENST00000517417 NEDD9Q14511 834 aa11.71□□□□□ -0.53
PCDHGA1-202ENST00000517417 NFIXQ14938 502 aa11.71□□□□□ -0.53
PCDHGA1-202ENST00000517417 TTLL6Q8N841 843 aa11.71□□□□□ -0.53
PCDHGA1-202ENST00000517417 MAGOHBQ96A72 148 aaKnown RBP11.71□□□□□ -0.53
PCDHGA1-202ENST00000517417 TBC1D31Q96DN5 1066 aa11.71□□□□□ -0.53
PCDHGA1-202ENST00000517417 ERGIC2Q96RQ1 377 aa11.71□□□□□ -0.53
PCDHGA1-202ENST00000517417 UBXN6Q9BZV1 441 aa11.71□□□□□ -0.53
PCDHGA1-202ENST00000517417 RAB20Q9NX57 234 aa11.71□□□□□ -0.53
PCDHGA1-202ENST00000517417 ODF2LQ9ULJ1 636 aa11.71□□□□□ -0.53
PCDHGA1-202ENST00000517417 GOLGA8IPA6NC78 632 aa11.71□□□□□ -0.54
PCDHGA1-202ENST00000517417 GOLGA8JA6NMD2 632 aa11.71□□□□□ -0.54
PCDHGA1-202ENST00000517417 PDE2AO00408 941 aaPredicted RBP11.71□□□□□ -0.54
PCDHGA1-202ENST00000517417 CHUKO15111 745 aa11.71□□□□□ -0.54
PCDHGA1-202ENST00000517417 MYBL2P10244 700 aa11.71□□□□□ -0.54
PCDHGA1-202ENST00000517417 PSMD2Q13200 908 aa11.71□□□□□ -0.54
PCDHGA1-202ENST00000517417 MTERF2Q49AM1 385 aa11.71□□□□□ -0.54
PCDHGA1-202ENST00000517417 RNPC3Q96LT9 517 aaKnown RBP11.71□□□□□ -0.54
PCDHGA1-202ENST00000517417 REXO2Q9Y3B8 237 aaKnown RBP11.71□□□□□ -0.54
PCDHGA1-202ENST00000517417 RIC1Q4ADV7 1423 aa11.71□□□□□ -0.54
PCDHGA1-202ENST00000517417 CTNND1O60716 968 aaKnown RBP11.71□□□□□ -0.54
PCDHGA1-202ENST00000517417 STK10O94804 968 aaKnown RBP11.71□□□□□ -0.54
PCDHGA1-202ENST00000517417 PIK3CAP42336 1068 aa11.71□□□□□ -0.54
PCDHGA1-202ENST00000517417 OSTNP61366 133 aa11.71□□□□□ -0.54
PCDHGA1-202ENST00000517417 MAP7D1Q3KQU3 841 aa11.71□□□□□ -0.54
PCDHGA1-202ENST00000517417 TMEM179Q6ZVK1 233 aa11.71□□□□□ -0.54
PCDHGA1-202ENST00000517417 ADGRA1Q86SQ6 560 aa11.71□□□□□ -0.54
PCDHGA1-202ENST00000517417 RAB3IL1Q8TBN0 382 aa11.71□□□□□ -0.54
PCDHGA1-202ENST00000517417 CCDC110Q8TBZ0 833 aa11.71□□□□□ -0.54
PCDHGA1-202ENST00000517417 CCT8L2Q96SF2 557 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms