RNA–Protein interactions for RNA: ENST00000517026.1

SCARNA21-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 139 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21-201ENST00000517026 PLA2G4FQ68DD2 849 aa16.35■□□□□ 0.21
SCARNA21-201ENST00000517026 TAF2Q6P1X5 1199 aa16.35■□□□□ 0.21
SCARNA21-201ENST00000517026 ANO5Q75V66 913 aa16.35■□□□□ 0.21
SCARNA21-201ENST00000517026 LRRC8DQ7L1W4 858 aa16.35■□□□□ 0.21
SCARNA21-201ENST00000517026 DEFB128Q7Z7B8 93 aa16.35■□□□□ 0.21
SCARNA21-201ENST00000517026 ZNF579Q8NAF0 562 aaKnown RBP16.35■□□□□ 0.21
SCARNA21-201ENST00000517026 NIFKQ9BYG3 293 aaKnown RBP16.35■□□□□ 0.21
SCARNA21-201ENST00000517026 ZSCAN16Q9H4T2 348 aaPredicted RBP16.35■□□□□ 0.21
SCARNA21-201ENST00000517026 ZSWIM4Q9H7M6 989 aa16.35■□□□□ 0.21
SCARNA21-201ENST00000517026 PCDHA2Q9Y5H9 948 aa16.35■□□□□ 0.21
SCARNA21-201ENST00000517026 PP2D1A8MPX8 630 aa16.34■□□□□ 0.21
SCARNA21-201ENST00000517026 LAD1O00515 517 aa16.34■□□□□ 0.21
SCARNA21-201ENST00000517026 MED24O75448 989 aa16.34■□□□□ 0.21
SCARNA21-201ENST00000517026 SPATA31C1P0DKV0 1188 aa16.34■□□□□ 0.21
SCARNA21-201ENST00000517026 PRPHP41219 470 aa16.34■□□□□ 0.21
SCARNA21-201ENST00000517026 NPEPPSP55786 919 aa16.34■□□□□ 0.21
SCARNA21-201ENST00000517026 CEBPZQ03701 1054 aaKnown RBP16.34■□□□□ 0.21
SCARNA21-201ENST00000517026 PPIGQ13427 754 aaKnown RBP eCLIP16.34■□□□□ 0.21
SCARNA21-201ENST00000517026 MBTPS1Q14703 1052 aa16.34■□□□□ 0.21
SCARNA21-201ENST00000517026 FOXD4L6Q3SYB3 417 aaPredicted RBP16.34■□□□□ 0.21
SCARNA21-201ENST00000517026 C9orf50Q5SZB4 431 aa16.34■□□□□ 0.21
SCARNA21-201ENST00000517026 FOXD4L3Q6VB84 417 aaPredicted RBP16.34■□□□□ 0.21
SCARNA21-201ENST00000517026 DTHD1Q6ZMT9 781 aa16.34■□□□□ 0.21
SCARNA21-201ENST00000517026 C4orf19Q8IY42 314 aa16.34■□□□□ 0.21
SCARNA21-201ENST00000517026 OSBPL7Q9BZF2 842 aa16.34■□□□□ 0.21
SCARNA21-201ENST00000517026 COL1A2P08123 1366 aa16.34■□□□□ 0.21
SCARNA21-201ENST00000517026 RSPH10B2B2RC85 870 aa16.33■□□□□ 0.2
SCARNA21-201ENST00000517026 DKC1O60832 514 aaKnown RBP eCLIP16.33■□□□□ 0.21e-54■■■■■ 66.1
SCARNA21-201ENST00000517026 RSPH10BP0C881 870 aa16.33■□□□□ 0.2
SCARNA21-201ENST00000517026 CDC25AP30304 524 aa16.33■□□□□ 0.2
SCARNA21-201ENST00000517026 TMEM62Q0P6H9 643 aa16.33■□□□□ 0.2
SCARNA21-201ENST00000517026 PDIA5Q14554 519 aa16.33■□□□□ 0.2
SCARNA21-201ENST00000517026 PTPAQ15257 358 aa16.33■□□□□ 0.2
SCARNA21-201ENST00000517026 SHHQ15465 462 aa16.33■□□□□ 0.2
SCARNA21-201ENST00000517026 ECM1Q16610 540 aa16.33■□□□□ 0.2
SCARNA21-201ENST00000517026 CATSPER3Q86XQ3 398 aa16.33■□□□□ 0.2
SCARNA21-201ENST00000517026 KIAA0319LQ8IZA0 1049 aa16.33■□□□□ 0.2
SCARNA21-201ENST00000517026 METTL13Q8N6R0 699 aa16.33■□□□□ 0.2
SCARNA21-201ENST00000517026 IGSF22Q8N9C0 903 aa16.33■□□□□ 0.2
SCARNA21-201ENST00000517026 USP28Q96RU2 1077 aa16.33■□□□□ 0.2
SCARNA21-201ENST00000517026 CEP89Q96ST8 783 aa16.33■□□□□ 0.2
SCARNA21-201ENST00000517026 IL23AQ9NPF7 189 aa16.33■□□□□ 0.2
SCARNA21-201ENST00000517026 LRWD1Q9UFC0 647 aa16.33■□□□□ 0.2
SCARNA21-201ENST00000517026 CEP131Q9UPN4 1083 aa16.33■□□□□ 0.2
SCARNA21-201ENST00000517026 CDH23Q9H251 3354 aa16.32■□□□□ 0.2
SCARNA21-201ENST00000517026 SMIM35A0A1B0GVV1 85 aa16.32■□□□□ 0.2
SCARNA21-201ENST00000517026 VWA3AA6NCI4 1184 aa16.32■□□□□ 0.2
SCARNA21-201ENST00000517026 NBNO60934 754 aa16.32■□□□□ 0.2
SCARNA21-201ENST00000517026 LYPLA2O95372 231 aa16.32■□□□□ 0.2
SCARNA21-201ENST00000517026 F13A1P00488 732 aa16.32■□□□□ 0.2
SCARNA21-201ENST00000517026 CHRNA1P02708 482 aa16.32■□□□□ 0.2
SCARNA21-201ENST00000517026 YWHABP31946 246 aaKnown RBP16.32■□□□□ 0.2
SCARNA21-201ENST00000517026 CLCN3P51790 818 aa16.32■□□□□ 0.2
SCARNA21-201ENST00000517026 GRIN1Q05586 938 aa16.32■□□□□ 0.2
SCARNA21-201ENST00000517026 TMEM240Q5SV17 173 aa16.32■□□□□ 0.2
SCARNA21-201ENST00000517026 ZNF365Q70YC5 407 aa16.32■□□□□ 0.2
SCARNA21-201ENST00000517026 RPAINQ86UA6 219 aa16.32■□□□□ 0.2
SCARNA21-201ENST00000517026 TDHQ8IZJ6 230 aa16.32■□□□□ 0.2
SCARNA21-201ENST00000517026 LRRC71Q8N4P6 559 aa16.32■□□□□ 0.2
SCARNA21-201ENST00000517026 ERMNQ8TAM6 284 aa16.32■□□□□ 0.2
SCARNA21-201ENST00000517026 NEK9Q8TD19 979 aa16.32■□□□□ 0.2
SCARNA21-201ENST00000517026 PIGOQ8TEQ8 1089 aa16.32■□□□□ 0.2
SCARNA21-201ENST00000517026 CEP170P1Q96L14 293 aa16.32■□□□□ 0.2
SCARNA21-201ENST00000517026 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.32■□□□□ 0.2
SCARNA21-201ENST00000517026 POLR3CQ9BUI4 534 aaPredicted RBP16.32■□□□□ 0.2
SCARNA21-201ENST00000517026 SUGCTQ9HAC7 445 aa16.32■□□□□ 0.2
SCARNA21-201ENST00000517026 CYP26B1Q9NR63 512 aa16.32■□□□□ 0.2
SCARNA21-201ENST00000517026 TFIP11Q9UBB9 837 aaKnown RBP16.32■□□□□ 0.2
SCARNA21-201ENST00000517026 ZDHHC9Q9Y397 364 aa16.32■□□□□ 0.2
SCARNA21-201ENST00000517026 MAGEB2O15479 319 aa16.31■□□□□ 0.2
SCARNA21-201ENST00000517026 CAND2O75155 1236 aa16.31■□□□□ 0.2
SCARNA21-201ENST00000517026 BMP15O95972 392 aa16.31■□□□□ 0.2
SCARNA21-201ENST00000517026 PDIA4P13667 645 aaKnown RBP16.31■□□□□ 0.2
SCARNA21-201ENST00000517026 MARCKSP29966 332 aaPredicted RBP16.31■□□□□ 0.2
SCARNA21-201ENST00000517026 CCT6AP40227 531 aaKnown RBP16.31■□□□□ 0.2
SCARNA21-201ENST00000517026 MRPS6P82932 125 aaKnown RBP16.31■□□□□ 0.2
SCARNA21-201ENST00000517026 MGAT3Q09327 533 aa16.31■□□□□ 0.2
SCARNA21-201ENST00000517026 TBC1D8BQ0IIM8 1120 aa16.31■□□□□ 0.2
SCARNA21-201ENST00000517026 DRP2Q13474 957 aa16.31■□□□□ 0.2
SCARNA21-201ENST00000517026 FAM26DQ5JW98 314 aa16.31■□□□□ 0.2
SCARNA21-201ENST00000517026 ARL6IP4Q66PJ3 421 aaKnown RBP16.31■□□□□ 0.2
SCARNA21-201ENST00000517026 EFCAB12Q6NXP0 572 aa16.31■□□□□ 0.2
SCARNA21-201ENST00000517026 POTEGQ6S5H5 508 aa16.31■□□□□ 0.2
SCARNA21-201ENST00000517026 RSPH3Q86UC2 560 aa16.31■□□□□ 0.2
SCARNA21-201ENST00000517026 LINC01465Q8N7H1 131 aa16.31■□□□□ 0.2
SCARNA21-201ENST00000517026 PPP1R16BQ96T49 567 aa16.31■□□□□ 0.2
SCARNA21-201ENST00000517026 TUFT1Q9NNX1 390 aa16.31■□□□□ 0.2
SCARNA21-201ENST00000517026 BMP2KQ9NSY1 1161 aaPredicted RBP16.31■□□□□ 0.2
SCARNA21-201ENST00000517026 DAXXQ9UER7 740 aaPredicted RBP16.31■□□□□ 0.2
SCARNA21-201ENST00000517026 CDY2AQ9Y6F7 541 aa16.31■□□□□ 0.2
SCARNA21-201ENST00000517026 MUC3AQ02505 3323 aa16.3■□□□□ 0.2
SCARNA21-201ENST00000517026 BRD1O95696 1058 aa16.3■□□□□ 0.2
SCARNA21-201ENST00000517026 RPA1P27694 616 aa16.3■□□□□ 0.2
SCARNA21-201ENST00000517026 RFC2P35250 354 aa16.3■□□□□ 0.2
SCARNA21-201ENST00000517026 MKRN4PQ13434 485 aaPredicted RBP16.3■□□□□ 0.2
SCARNA21-201ENST00000517026 TCTN1Q2MV58 587 aa16.3■□□□□ 0.2
SCARNA21-201ENST00000517026 XKR9Q5GH70 373 aa16.3■□□□□ 0.2
SCARNA21-201ENST00000517026 OTUD6AQ7L8S5 288 aa16.3■□□□□ 0.2
SCARNA21-201ENST00000517026 RPUSD2Q8IZ73 545 aaKnown RBP16.3■□□□□ 0.2
SCARNA21-201ENST00000517026 SNX29Q8TEQ0 813 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms