RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 ETV3LQ6ZN32 361 aa4.35□□□□□ -1.71
RNU6-390P-201ENST00000516259 TTLL7Q6ZT98 887 aa4.35□□□□□ -1.71
RNU6-390P-201ENST00000516259 CILP2Q8IUL8 1156 aa4.35□□□□□ -1.71
RNU6-390P-201ENST00000516259 RNF32Q9H0A6 362 aa4.35□□□□□ -1.71
RNU6-390P-201ENST00000516259 CCM2LQ9NUG4 571 aaPredicted RBP4.35□□□□□ -1.71
RNU6-390P-201ENST00000516259 DENND2AQ9ULE3 1009 aa4.35□□□□□ -1.71
RNU6-390P-201ENST00000516259 PCDHGA9Q9Y5G4 932 aaKnown RBP4.35□□□□□ -1.71
RNU6-390P-201ENST00000516259 PCDHGA8Q9Y5G5 932 aa4.35□□□□□ -1.71
RNU6-390P-201ENST00000516259 PCDHGA7Q9Y5G6 932 aa4.35□□□□□ -1.71
RNU6-390P-201ENST00000516259 PCDHGA6Q9Y5G7 932 aa4.35□□□□□ -1.71
RNU6-390P-201ENST00000516259 PCDHGA3Q9Y5H0 932 aa4.35□□□□□ -1.71
RNU6-390P-201ENST00000516259 PCDHGA2Q9Y5H1 932 aa4.35□□□□□ -1.71
RNU6-390P-201ENST00000516259 ZNF839A8K0R7 811 aa4.34□□□□□ -1.71
RNU6-390P-201ENST00000516259 BIN1O00499 593 aa4.34□□□□□ -1.71
RNU6-390P-201ENST00000516259 PEX10O60683 326 aa4.34□□□□□ -1.71
RNU6-390P-201ENST00000516259 PRPF6O94906 941 aaKnown RBP4.34□□□□□ -1.71
RNU6-390P-201ENST00000516259 MPIG6BO95866 241 aa4.34□□□□□ -1.71
RNU6-390P-201ENST00000516259 GLI1P08151 1106 aa4.34□□□□□ -1.71
RNU6-390P-201ENST00000516259 MMEP08473 750 aa4.34□□□□□ -1.71
RNU6-390P-201ENST00000516259 PTGS1P23219 599 aa4.34□□□□□ -1.71
RNU6-390P-201ENST00000516259 TRHRP34981 398 aaPredicted RBP4.34□□□□□ -1.71
RNU6-390P-201ENST00000516259 WASP42768 502 aa4.34□□□□□ -1.71
RNU6-390P-201ENST00000516259 SCAND1P57086 179 aa4.34□□□□□ -1.71
RNU6-390P-201ENST00000516259 NKX3-2P78367 333 aa4.34□□□□□ -1.71
RNU6-390P-201ENST00000516259 GBX1Q14549 363 aa4.34□□□□□ -1.71
RNU6-390P-201ENST00000516259 RAB3GAP1Q15042 981 aa4.34□□□□□ -1.71
RNU6-390P-201ENST00000516259 LRRC41Q15345 812 aa4.34□□□□□ -1.71
RNU6-390P-201ENST00000516259 STILQ15468 1287 aa4.34□□□□□ -1.71
RNU6-390P-201ENST00000516259 CD276Q5ZPR3 534 aa4.34□□□□□ -1.71
RNU6-390P-201ENST00000516259 TEPPQ6URK8 271 aa4.34□□□□□ -1.71
RNU6-390P-201ENST00000516259 PNMA8AQ86V59 439 aaPredicted RBP4.34□□□□□ -1.71
RNU6-390P-201ENST00000516259 ZC3H18Q86VM9 953 aaKnown RBP4.34□□□□□ -1.71
RNU6-390P-201ENST00000516259 PROSER1Q86XN7 944 aa4.34□□□□□ -1.71
RNU6-390P-201ENST00000516259 DGKHQ86XP1 1220 aa4.34□□□□□ -1.71
RNU6-390P-201ENST00000516259 SLC41A1Q8IVJ1 513 aa4.34□□□□□ -1.71
RNU6-390P-201ENST00000516259 IGDCC4Q8TDY8 1250 aa4.34□□□□□ -1.71
RNU6-390P-201ENST00000516259 RTF1Q92541 710 aaKnown RBP4.34□□□□□ -1.71
RNU6-390P-201ENST00000516259 HSPBAP1Q96EW2 488 aa4.34□□□□□ -1.71
RNU6-390P-201ENST00000516259 WRNIP1Q96S55 665 aa4.34□□□□□ -1.71
RNU6-390P-201ENST00000516259 TMEM209Q96SK2 561 aa4.34□□□□□ -1.71
RNU6-390P-201ENST00000516259 BTBD2Q9BX70 525 aa4.34□□□□□ -1.71
RNU6-390P-201ENST00000516259 PITHD1Q9GZP4 211 aaPredicted RBP4.34□□□□□ -1.71
RNU6-390P-201ENST00000516259 ZNF552Q9H707 407 aaPredicted RBP4.34□□□□□ -1.71
RNU6-390P-201ENST00000516259 PRDM11Q9NQV5 511 aa4.34□□□□□ -1.71
RNU6-390P-201ENST00000516259 GALNT8Q9NY28 637 aa4.34□□□□□ -1.71
RNU6-390P-201ENST00000516259 DBR1Q9UK59 544 aaKnown RBP4.34□□□□□ -1.71
RNU6-390P-201ENST00000516259 TMPRSS11EQ9UL52 423 aa4.34□□□□□ -1.71
RNU6-390P-201ENST00000516259 SIT1Q9Y3P8 196 aa4.34□□□□□ -1.71
RNU6-390P-201ENST00000516259 GPR45Q9Y5Y3 372 aa4.34□□□□□ -1.71
RNU6-390P-201ENST00000516259 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.33□□□□□ -1.72
RNU6-390P-201ENST00000516259 HYAL3O43820 417 aaPredicted RBP4.33□□□□□ -1.72
RNU6-390P-201ENST00000516259 MT-CO1P00395 513 aa4.33□□□□□ -1.72
RNU6-390P-201ENST00000516259 PFKMP08237 780 aa4.33□□□□□ -1.72
RNU6-390P-201ENST00000516259 NCAM1P13591 858 aa4.33□□□□□ -1.72
RNU6-390P-201ENST00000516259 LPOP22079 712 aaPredicted RBP4.33□□□□□ -1.72
RNU6-390P-201ENST00000516259 CACNB2Q08289 660 aaPredicted RBP4.33□□□□□ -1.72
RNU6-390P-201ENST00000516259 TARBP2Q15633 366 aaKnown RBP4.33□□□□□ -1.72
RNU6-390P-201ENST00000516259 UGT8Q16880 541 aa4.33□□□□□ -1.72
RNU6-390P-201ENST00000516259 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.33□□□□□ -1.72
RNU6-390P-201ENST00000516259 MUM1Q2TAK8 710 aa4.33□□□□□ -1.72
RNU6-390P-201ENST00000516259 CR1LQ2VPA4 569 aa4.33□□□□□ -1.72
RNU6-390P-201ENST00000516259 RRP12Q5JTH9 1297 aaKnown RBP4.33□□□□□ -1.72
RNU6-390P-201ENST00000516259 DTX3Q8N9I9 347 aa4.33□□□□□ -1.72
RNU6-390P-201ENST00000516259 RPGRQ92834 1020 aaKnown RBP4.33□□□□□ -1.72
RNU6-390P-201ENST00000516259 HAPLN2Q9GZV7 340 aa4.33□□□□□ -1.72
RNU6-390P-201ENST00000516259 CSRNP2Q9H175 543 aa4.33□□□□□ -1.72
RNU6-390P-201ENST00000516259 INCENPQ9NQS7 918 aa4.33□□□□□ -1.72
RNU6-390P-201ENST00000516259 SLC52A1Q9NWF4 448 aa4.33□□□□□ -1.72
RNU6-390P-201ENST00000516259 IP6K2Q9UHH9 426 aa4.33□□□□□ -1.72
RNU6-390P-201ENST00000516259 PPP2R3BQ9Y5P8 575 aa4.33□□□□□ -1.72
RNU6-390P-201ENST00000516259 A0A0A6YYJ9 748 aa4.32□□□□□ -1.72
RNU6-390P-201ENST00000516259 ST20-MTHFSA0A0A6YYL1 179 aa4.32□□□□□ -1.72
RNU6-390P-201ENST00000516259 PRSS38A1L453 326 aa4.32□□□□□ -1.72
RNU6-390P-201ENST00000516259 ELL2O00472 640 aaPredicted RBP4.32□□□□□ -1.72
RNU6-390P-201ENST00000516259 NFIBO00712 420 aa4.32□□□□□ -1.72
RNU6-390P-201ENST00000516259 CUTAO60888 179 aa4.32□□□□□ -1.72
RNU6-390P-201ENST00000516259 H2AFYO75367 372 aaKnown RBP4.32□□□□□ -1.72
RNU6-390P-201ENST00000516259 ZRANB2O95218 330 aaKnown RBP eCLIP4.32□□□□□ -1.72
RNU6-390P-201ENST00000516259 MYL1P05976 194 aa4.32□□□□□ -1.72
RNU6-390P-201ENST00000516259 CT47B1P0C2W7 299 aaPredicted RBP4.32□□□□□ -1.72
RNU6-390P-201ENST00000516259 PF4V1P10720 104 aa4.32□□□□□ -1.72
RNU6-390P-201ENST00000516259 ATF3P18847 181 aa4.32□□□□□ -1.72
RNU6-390P-201ENST00000516259 GP2P55259 537 aaKnown RBP4.32□□□□□ -1.72
RNU6-390P-201ENST00000516259 PURAQ00577 322 aaKnown RBP4.32□□□□□ -1.72
RNU6-390P-201ENST00000516259 ADCY2Q08462 1091 aa4.32□□□□□ -1.72
RNU6-390P-201ENST00000516259 NFATC3Q12968 1075 aa4.32□□□□□ -1.72
RNU6-390P-201ENST00000516259 MYBPC3Q14896 1274 aa4.32□□□□□ -1.72
RNU6-390P-201ENST00000516259 ODF1Q14990 250 aa4.32□□□□□ -1.72
RNU6-390P-201ENST00000516259 ARTNQ5T4W7 220 aa4.32□□□□□ -1.72
RNU6-390P-201ENST00000516259 ADGRF1Q5T601 910 aa4.32□□□□□ -1.72
RNU6-390P-201ENST00000516259 SLFN12LQ6IEE8 588 aa4.32□□□□□ -1.72
RNU6-390P-201ENST00000516259 DPP8Q6V1X1 898 aaPredicted RBP4.32□□□□□ -1.72
RNU6-390P-201ENST00000516259 EPM2AIP1Q7L775 607 aaPredicted RBP4.32□□□□□ -1.72
RNU6-390P-201ENST00000516259 BMP8AQ7Z5Y6 402 aa4.32□□□□□ -1.72
RNU6-390P-201ENST00000516259 C11orf96Q7Z7L8 435 aa4.32□□□□□ -1.72
RNU6-390P-201ENST00000516259 LYSMD2Q8IV50 215 aa4.32□□□□□ -1.72
RNU6-390P-201ENST00000516259 WDR75Q8IWA0 830 aaKnown RBP4.32□□□□□ -1.72
RNU6-390P-201ENST00000516259 RBM12BQ8IXT5 1001 aaKnown RBP4.32□□□□□ -1.72
RNU6-390P-201ENST00000516259 CCDC146Q8IYE0 955 aa4.32□□□□□ -1.72
RNU6-390P-201ENST00000516259 ABI1Q8IZP0 508 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms