RNA–Protein interactions for RNA: ENST00000515835.2

PDE4D-225, Transcript of phosphodiesterase 4D, humanhuman

TSL 4 BASIC

Gene PDE4D, Length 590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-225ENST00000515835 DDB1Q16531 1140 aa8.3□□□□□ -1.08
PDE4D-225ENST00000515835 EMC4Q5J8M3 183 aa8.3□□□□□ -1.08
PDE4D-225ENST00000515835 SDE2Q6IQ49 451 aa8.3□□□□□ -1.08
PDE4D-225ENST00000515835 CYP4F22Q6NT55 531 aa8.3□□□□□ -1.08
PDE4D-225ENST00000515835 PCDH19Q8TAB3 1148 aa8.3□□□□□ -1.08
PDE4D-225ENST00000515835 SCLYQ96I15 445 aa8.3□□□□□ -1.08
PDE4D-225ENST00000515835 CLUHP3Q96NS8 147 aa8.3□□□□□ -1.08
PDE4D-225ENST00000515835 CNTD2Q9H8S5 307 aa8.3□□□□□ -1.08
PDE4D-225ENST00000515835 MBD1Q9UIS9 605 aaPredicted RBP8.3□□□□□ -1.08
PDE4D-225ENST00000515835 ZNF652Q9Y2D9 606 aa8.3□□□□□ -1.08
PDE4D-225ENST00000515835 SIT1Q9Y3P8 196 aa8.3□□□□□ -1.08
PDE4D-225ENST00000515835 HCFC2Q9Y5Z7 792 aa8.3□□□□□ -1.08
PDE4D-225ENST00000515835 CCDC7Q96M83 1385 aa8.3□□□□□ -1.08
PDE4D-225ENST00000515835 KRIT1O00522 736 aa8.29□□□□□ -1.08
PDE4D-225ENST00000515835 HGSO14964 777 aaPredicted RBP8.29□□□□□ -1.08
PDE4D-225ENST00000515835 PLSCR1O15162 318 aa8.29□□□□□ -1.08
PDE4D-225ENST00000515835 MAFKO60675 156 aa8.29□□□□□ -1.08
PDE4D-225ENST00000515835 PABPC4Q13310 644 aaKnown RBP eCLIP8.29□□□□□ -1.08
PDE4D-225ENST00000515835 EZH2Q15910 746 aaKnown RBP8.29□□□□□ -1.08
PDE4D-225ENST00000515835 PLEKHG4Q58EX7 1191 aa8.29□□□□□ -1.08
PDE4D-225ENST00000515835 STEAP3Q658P3 488 aa8.29□□□□□ -1.08
PDE4D-225ENST00000515835 SYDE1Q6ZW31 735 aaPredicted RBP8.29□□□□□ -1.08
PDE4D-225ENST00000515835 OTOP3Q7RTS5 596 aa8.29□□□□□ -1.08
PDE4D-225ENST00000515835 KIAA0907Q7Z7F0 614 aaPredicted RBP8.29□□□□□ -1.08
PDE4D-225ENST00000515835 BHLHE22Q8NFJ8 381 aaPredicted RBP8.29□□□□□ -1.08
PDE4D-225ENST00000515835 KCNN1Q92952 543 aa8.29□□□□□ -1.08
PDE4D-225ENST00000515835 FBXW5Q969U6 566 aa8.29□□□□□ -1.08
PDE4D-225ENST00000515835 TESK2Q96S53 571 aa8.29□□□□□ -1.08
PDE4D-225ENST00000515835 PPP1R16BQ96T49 567 aa8.29□□□□□ -1.08
PDE4D-225ENST00000515835 SLC38A3Q99624 504 aa8.29□□□□□ -1.08
PDE4D-225ENST00000515835 FEZ1Q99689 392 aa8.29□□□□□ -1.08
PDE4D-225ENST00000515835 KCNJ15Q99712 375 aa8.29□□□□□ -1.08
PDE4D-225ENST00000515835 SLC12A5Q9H2X9 1139 aa8.29□□□□□ -1.08
PDE4D-225ENST00000515835 SLC6A20Q9NP91 592 aa8.29□□□□□ -1.08
PDE4D-225ENST00000515835 CD163L1Q9NR16 1453 aa8.29□□□□□ -1.08
PDE4D-225ENST00000515835 NFAT5O94916 1531 aa8.29□□□□□ -1.08
PDE4D-225ENST00000515835 CLSPNQ9HAW4 1339 aa8.29□□□□□ -1.08
PDE4D-225ENST00000515835 ST20-MTHFSA0A0A6YYL1 179 aa8.28□□□□□ -1.08
PDE4D-225ENST00000515835 TCRBV16S1A1N1A0A5B0 115 aa8.28□□□□□ -1.08
PDE4D-225ENST00000515835 GSTA4O15217 222 aa8.28□□□□□ -1.08
PDE4D-225ENST00000515835 TADA3O75528 432 aa8.28□□□□□ -1.08
PDE4D-225ENST00000515835 RASGRP1O95267 797 aa8.28□□□□□ -1.08
PDE4D-225ENST00000515835 GNAT1P11488 350 aa8.28□□□□□ -1.08
PDE4D-225ENST00000515835 GLDCP23378 1020 aa8.28□□□□□ -1.08
PDE4D-225ENST00000515835 HSD3B2P26439 372 aa8.28□□□□□ -1.08
PDE4D-225ENST00000515835 TKFCQ3LXA3 575 aa8.28□□□□□ -1.08
PDE4D-225ENST00000515835 HABP4Q5JVS0 413 aaKnown RBP8.28□□□□□ -1.08
PDE4D-225ENST00000515835 FGD2Q7Z6J4 655 aa8.28□□□□□ -1.08
PDE4D-225ENST00000515835 ZC3H7AQ8IWR0 971 aaKnown RBP8.28□□□□□ -1.08
PDE4D-225ENST00000515835 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.28□□□□□ -1.081e-6■■■□□ 15.4
PDE4D-225ENST00000515835 PHOSPHO1Q8TCT1 267 aa8.28□□□□□ -1.08
PDE4D-225ENST00000515835 ALG3Q92685 438 aa8.28□□□□□ -1.08
PDE4D-225ENST00000515835 SMOC1Q9H4F8 434 aa8.28□□□□□ -1.08
PDE4D-225ENST00000515835 PALD1Q9ULE6 856 aa8.28□□□□□ -1.08
PDE4D-225ENST00000515835 CD2APQ9Y5K6 639 aa8.28□□□□□ -1.08
PDE4D-225ENST00000515835 PARP4Q9UKK3 1724 aaKnown RBP8.28□□□□□ -1.08
PDE4D-225ENST00000515835 IRS2Q9Y4H2 1338 aa8.28□□□□□ -1.08
PDE4D-225ENST00000515835 A0A1W2PP64 1363 aa8.27□□□□□ -1.09
PDE4D-225ENST00000515835 EXOC5O00471 708 aa8.27□□□□□ -1.09
PDE4D-225ENST00000515835 TMEM253P0C7T8 217 aa8.27□□□□□ -1.09
PDE4D-225ENST00000515835 MED14OSP0DP75 135 aa8.27□□□□□ -1.09
PDE4D-225ENST00000515835 DLG4P78352 724 aa8.27□□□□□ -1.09
PDE4D-225ENST00000515835 ZNF200P98182 395 aaPredicted RBP8.27□□□□□ -1.09
PDE4D-225ENST00000515835 FAM47CQ5HY64 1035 aa8.27□□□□□ -1.09
PDE4D-225ENST00000515835 C16orf59Q7L2K0 433 aa8.27□□□□□ -1.09
PDE4D-225ENST00000515835 MILR1Q7Z6M3 343 aa8.27□□□□□ -1.09
PDE4D-225ENST00000515835 LDHDQ86WU2 507 aa8.27□□□□□ -1.09
PDE4D-225ENST00000515835 NME9Q86XW9 330 aa8.27□□□□□ -1.09
PDE4D-225ENST00000515835 PIP4K2CQ8TBX8 421 aa8.27□□□□□ -1.09
PDE4D-225ENST00000515835 PANK1Q8TE04 598 aa8.27□□□□□ -1.09
PDE4D-225ENST00000515835 RNF38Q9H0F5 515 aa8.27□□□□□ -1.09
PDE4D-225ENST00000515835 GCM1Q9NP62 436 aa8.27□□□□□ -1.09
PDE4D-225ENST00000515835 PLAAQ9Y263 795 aa8.27□□□□□ -1.09
PDE4D-225ENST00000515835 NUB1Q9Y5A7 615 aa8.27□□□□□ -1.09
PDE4D-225ENST00000515835 AKAP12Q02952 1782 aa8.27□□□□□ -1.09
PDE4D-225ENST00000515835 TNS1Q9HBL0 1735 aaKnown RBP8.26□□□□□ -1.09
PDE4D-225ENST00000515835 LRP5O75197 1615 aa8.26□□□□□ -1.09
PDE4D-225ENST00000515835 COL18A1P39060 1754 aa8.26□□□□□ -1.09
PDE4D-225ENST00000515835 B4E1Z4 1266 aa8.26□□□□□ -1.09
PDE4D-225ENST00000515835 NPTXRO95502 500 aa8.26□□□□□ -1.09
PDE4D-225ENST00000515835 FBLN1P23142 703 aa8.26□□□□□ -1.09
PDE4D-225ENST00000515835 CDR1P51861 262 aa8.26□□□□□ -1.09
PDE4D-225ENST00000515835 ST5P78524 1137 aa8.26□□□□□ -1.09
PDE4D-225ENST00000515835 TMF1P82094 1093 aa8.26□□□□□ -1.09
PDE4D-225ENST00000515835 R3HDM1Q15032 1099 aaKnown RBP8.26□□□□□ -1.09
PDE4D-225ENST00000515835 TARBP2Q15633 366 aaKnown RBP8.26□□□□□ -1.09
PDE4D-225ENST00000515835 ZNF648Q5T619 568 aaPredicted RBP8.26□□□□□ -1.09
PDE4D-225ENST00000515835 MZB1Q8WU39 189 aa8.26□□□□□ -1.09
PDE4D-225ENST00000515835 NINJ1Q92982 152 aa8.26□□□□□ -1.09
PDE4D-225ENST00000515835 INTS7Q9NVH2 962 aaKnown RBP8.26□□□□□ -1.09
PDE4D-225ENST00000515835 PCDHB4Q9Y5E5 795 aa8.26□□□□□ -1.09
PDE4D-225ENST00000515835 PCDHA5Q9Y5H7 936 aa8.26□□□□□ -1.09
PDE4D-225ENST00000515835 USP54Q70EL1 1684 aa8.26□□□□□ -1.09
PDE4D-225ENST00000515835 MON2Q7Z3U7 1717 aa8.26□□□□□ -1.09
PDE4D-225ENST00000515835 ANKRD36BQ8N2N9 1353 aa8.25□□□□□ -1.09
PDE4D-225ENST00000515835 ETV2O00321 342 aaPredicted RBP8.25□□□□□ -1.09
PDE4D-225ENST00000515835 N4BP3O15049 544 aa8.25□□□□□ -1.09
PDE4D-225ENST00000515835 DNAJC8O75937 253 aaPredicted RBP8.25□□□□□ -1.09
PDE4D-225ENST00000515835 ASLP04424 464 aa8.25□□□□□ -1.09
PDE4D-225ENST00000515835 SRGAP2CP0DJJ0 459 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms