RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 OSMP13725 252 aa6.6□□□□□ -1.35
RFC1-216ENST00000514572 RHCEP18577 417 aa6.6□□□□□ -1.35
RFC1-216ENST00000514572 NEK3P51956 506 aa6.6□□□□□ -1.35
RFC1-216ENST00000514572 RHDQ02161 417 aa6.6□□□□□ -1.35
RFC1-216ENST00000514572 SAFBQ15424 915 aaKnown RBP eCLIP6.6□□□□□ -1.35
RFC1-216ENST00000514572 MUM1Q2TAK8 710 aa6.6□□□□□ -1.35
RFC1-216ENST00000514572 CT83Q5H943 113 aa6.6□□□□□ -1.35
RFC1-216ENST00000514572 EP400NLQ6ZTU2 488 aa6.6□□□□□ -1.35
RFC1-216ENST00000514572 ESPNLQ6ZVH7 1005 aa6.6□□□□□ -1.35
RFC1-216ENST00000514572 KANSL1Q7Z3B3 1105 aa6.6□□□□□ -1.35
RFC1-216ENST00000514572 PHYKPLQ8IUZ5 450 aa6.6□□□□□ -1.35
RFC1-216ENST00000514572 SLC41A1Q8IVJ1 513 aa6.6□□□□□ -1.35
RFC1-216ENST00000514572 PRR18Q8N4B5 295 aa6.6□□□□□ -1.35
RFC1-216ENST00000514572 PDZD8Q8NEN9 1154 aa6.6□□□□□ -1.35
RFC1-216ENST00000514572 DIS3LQ8TF46 1054 aaKnown RBP6.6□□□□□ -1.35
RFC1-216ENST00000514572 BCL7CQ8WUZ0 217 aaPredicted RBP6.6□□□□□ -1.35
RFC1-216ENST00000514572 EAF2Q96CJ1 260 aaPredicted RBP6.6□□□□□ -1.35
RFC1-216ENST00000514572 MAML3Q96JK9 1138 aa6.6□□□□□ -1.35
RFC1-216ENST00000514572 STRBPQ96SI9 672 aaKnown RBP6.6□□□□□ -1.35
RFC1-216ENST00000514572 ARPC5LQ9BPX5 153 aa6.6□□□□□ -1.35
RFC1-216ENST00000514572 QRSL1Q9H0R6 528 aaKnown RBP6.6□□□□□ -1.35
RFC1-216ENST00000514572 POFUT1Q9H488 388 aa6.6□□□□□ -1.35
RFC1-216ENST00000514572 SLAMF8Q9P0V8 285 aa6.6□□□□□ -1.35
RFC1-216ENST00000514572 BTBD7Q9P203 1132 aa6.6□□□□□ -1.35
RFC1-216ENST00000514572 SAP30BPQ9UHR5 308 aaKnown RBP6.6□□□□□ -1.35
RFC1-216ENST00000514572 TAGLN3Q9UI15 199 aa6.6□□□□□ -1.35
RFC1-216ENST00000514572 ASB1Q9Y576 335 aa6.6□□□□□ -1.35
RFC1-216ENST00000514572 PCDHB4Q9Y5E5 795 aa6.6□□□□□ -1.35
RFC1-216ENST00000514572 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.59□□□□□ -1.35
RFC1-216ENST00000514572 PRSS38A1L453 326 aa6.59□□□□□ -1.35
RFC1-216ENST00000514572 CLEC2LP0C7M8 214 aa6.59□□□□□ -1.35
RFC1-216ENST00000514572 PRKCAP17252 672 aa6.59□□□□□ -1.35
RFC1-216ENST00000514572 AOAHP28039 575 aa6.59□□□□□ -1.35
RFC1-216ENST00000514572 THBS2P35442 1172 aa6.59□□□□□ -1.35
RFC1-216ENST00000514572 FXR1P51114 621 aaKnown RBP eCLIP6.59□□□□□ -1.35
RFC1-216ENST00000514572 PICALMQ13492 652 aa6.59□□□□□ -1.35
RFC1-216ENST00000514572 MYBPC3Q14896 1274 aa6.59□□□□□ -1.35
RFC1-216ENST00000514572 UGT8Q16880 541 aa6.59□□□□□ -1.35
RFC1-216ENST00000514572 RSPO4Q2I0M5 234 aaPredicted RBP6.59□□□□□ -1.35
RFC1-216ENST00000514572 XP32Q5T750 250 aa6.59□□□□□ -1.35
RFC1-216ENST00000514572 CATIPQ7Z7H3 387 aa6.59□□□□□ -1.35
RFC1-216ENST00000514572 CILP2Q8IUL8 1156 aa6.59□□□□□ -1.35
RFC1-216ENST00000514572 TRIM48Q8IWZ4 208 aa6.59□□□□□ -1.35
RFC1-216ENST00000514572 STK11IPQ8N1F8 1099 aa6.59□□□□□ -1.35
RFC1-216ENST00000514572 C7orf31Q8N865 590 aa6.59□□□□□ -1.35
RFC1-216ENST00000514572 NUP43Q8NFH3 380 aa6.59□□□□□ -1.35
RFC1-216ENST00000514572 TSPEARQ8WU66 669 aa6.59□□□□□ -1.35
RFC1-216ENST00000514572 SYTL4Q96C24 671 aaPredicted RBP6.59□□□□□ -1.35
RFC1-216ENST00000514572 RAX2Q96IS3 184 aa6.59□□□□□ -1.35
RFC1-216ENST00000514572 FAM193BQ96PV7 902 aaPredicted RBP6.59□□□□□ -1.35
RFC1-216ENST00000514572 ANO3Q9BYT9 981 aa6.59□□□□□ -1.35
RFC1-216ENST00000514572 RNF38Q9H0F5 515 aa6.59□□□□□ -1.35
RFC1-216ENST00000514572 SEMA6BQ9H3T3 888 aa6.59□□□□□ -1.35
RFC1-216ENST00000514572 RIC8BQ9NVN3 520 aa6.59□□□□□ -1.35
RFC1-216ENST00000514572 PALD1Q9ULE6 856 aa6.59□□□□□ -1.35
RFC1-216ENST00000514572 PRAMEF25A6NGN4 478 aa6.58□□□□□ -1.36
RFC1-216ENST00000514572 GOLGA6L22H0YM25 854 aa6.58□□□□□ -1.36
RFC1-216ENST00000514572 TPP1O14773 563 aa6.58□□□□□ -1.36
RFC1-216ENST00000514572 ZBED1O96006 694 aa6.58□□□□□ -1.36
RFC1-216ENST00000514572 PRLP01236 227 aa6.58□□□□□ -1.36
RFC1-216ENST00000514572 PRNPP04156 253 aa6.58□□□□□ -1.36
RFC1-216ENST00000514572 NBPF7P0C2Y1 421 aaPredicted RBP6.58□□□□□ -1.36
RFC1-216ENST00000514572 MTHFD2P13995 350 aa6.58□□□□□ -1.36
RFC1-216ENST00000514572 FUT4P22083 530 aa6.58□□□□□ -1.36
RFC1-216ENST00000514572 ITGB7P26010 798 aa6.58□□□□□ -1.36
RFC1-216ENST00000514572 GJA9P57773 515 aa6.58□□□□□ -1.36
RFC1-216ENST00000514572 DHX8Q14562 1220 aaKnown RBP6.58□□□□□ -1.36
RFC1-216ENST00000514572 COBLL1Q53SF7 1204 aa6.58□□□□□ -1.36
RFC1-216ENST00000514572 MBNL2Q5VZF2 373 aaKnown RBP6.58□□□□□ -1.36
RFC1-216ENST00000514572 OVCH2Q7RTZ1 564 aa6.58□□□□□ -1.36
RFC1-216ENST00000514572 SRGAP1Q7Z6B7 1085 aa6.58□□□□□ -1.36
RFC1-216ENST00000514572 NLRX1Q86UT6 975 aa6.58□□□□□ -1.36
RFC1-216ENST00000514572 SIRT2Q8IXJ6 389 aa6.58□□□□□ -1.36
RFC1-216ENST00000514572 MIER2Q8N344 545 aa6.58□□□□□ -1.36
RFC1-216ENST00000514572 ZBTB34Q8NCN2 500 aa6.58□□□□□ -1.36
RFC1-216ENST00000514572 COA7Q96BR5 231 aa6.58□□□□□ -1.36
RFC1-216ENST00000514572 SHISA4Q96DD7 197 aa6.58□□□□□ -1.36
RFC1-216ENST00000514572 GBP4Q96PP9 640 aa6.58□□□□□ -1.36
RFC1-216ENST00000514572 ACO2Q99798 780 aaKnown RBP6.58□□□□□ -1.36
RFC1-216ENST00000514572 TNFRSF12AQ9NP84 129 aa6.58□□□□□ -1.36
RFC1-216ENST00000514572 C19orf73Q9NVV2 129 aa6.58□□□□□ -1.36
RFC1-216ENST00000514572 HSPBP1Q9NZL4 362 aa6.58□□□□□ -1.36
RFC1-216ENST00000514572 SIT1Q9Y3P8 196 aa6.58□□□□□ -1.36
RFC1-216ENST00000514572 NUMBLQ9Y6R0 609 aa6.58□□□□□ -1.36
RFC1-216ENST00000514572 NACADO15069 1562 aa6.57□□□□□ -1.36
RFC1-216ENST00000514572 UBA6A0AVT1 1052 aaPredicted RBP6.57□□□□□ -1.36
RFC1-216ENST00000514572 FITM1A5D6W6 292 aa6.57□□□□□ -1.36
RFC1-216ENST00000514572 H3BML4 177 aa6.57□□□□□ -1.36
RFC1-216ENST00000514572 CTNND1O60716 968 aaKnown RBP6.57□□□□□ -1.36
RFC1-216ENST00000514572 MPIG6BO95866 241 aa6.57□□□□□ -1.36
RFC1-216ENST00000514572 PFKMP08237 780 aa6.57□□□□□ -1.36
RFC1-216ENST00000514572 IFIT2P09913 472 aaKnown RBP6.57□□□□□ -1.36
RFC1-216ENST00000514572 CD8BP10966 210 aa6.57□□□□□ -1.36
RFC1-216ENST00000514572 SLC5A1P13866 664 aa6.57□□□□□ -1.36
RFC1-216ENST00000514572 SLC5A3P53794 718 aa6.57□□□□□ -1.36
RFC1-216ENST00000514572 ZP2Q05996 745 aa6.57□□□□□ -1.36
RFC1-216ENST00000514572 BNIP3Q12983 259 aa6.57□□□□□ -1.36
RFC1-216ENST00000514572 C10orf62Q5T681 223 aaPredicted RBP6.57□□□□□ -1.36
RFC1-216ENST00000514572 CCDC62Q6P9F0 684 aa6.57□□□□□ -1.36
RFC1-216ENST00000514572 SPRED2Q7Z698 418 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms