RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 SF3A2Q15428 464 aaKnown RBP3.82□□□□□ -1.8
CHD1-211ENST00000514344 LETM2Q2VYF4 491 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 FBXO47Q5MNV8 452 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 RCSD1Q6JBY9 416 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 PHLDB3Q6NSJ2 640 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 CABP7Q86V35 215 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 MRPL43Q8N983 215 aaKnown RBP3.82□□□□□ -1.8
CHD1-211ENST00000514344 DNAJB3Q8WWF6 145 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 RMDN3Q96TC7 470 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 GPR20Q99678 358 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 MYL10Q9BUA6 226 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 SCNM1Q9BWG6 230 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 RANBP17Q9H2T7 1088 aaKnown RBP3.82□□□□□ -1.8
CHD1-211ENST00000514344 GPCPD1Q9NPB8 672 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 COL20A1Q9P218 1284 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 GINS2Q9Y248 185 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 CFAP46Q8IYW2 2715 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 ACACAQ13085 2346 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 C2orf71A6NGG8 1288 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 FAM170BA6NMN3 283 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 NT5C1B-RDH14C9J2C7 533 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 NOP56O00567 594 aaKnown RBP3.82□□□□□ -1.8
CHD1-211ENST00000514344 MAP3K13O43283 966 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 CLASP2O75122 1294 aaKnown RBP3.82□□□□□ -1.8
CHD1-211ENST00000514344 GNAI2P04899 355 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 LGALS2P05162 132 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 FGFR1P11362 822 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 GNAT1P11488 350 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 TFAP4Q01664 338 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 SP2Q02086 613 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 SRSF5Q13243 272 aaKnown RBP3.82□□□□□ -1.8
CHD1-211ENST00000514344 CSRP2Q16527 193 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 TSHZ1Q6ZSZ6 1077 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 ADAM32Q8TC27 787 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 NSUN6Q8TEA1 469 aaKnown RBP3.82□□□□□ -1.8
CHD1-211ENST00000514344 EMID1Q96A84 441 aaPredicted RBP3.82□□□□□ -1.8
CHD1-211ENST00000514344 PUS7LQ9H0K6 701 aaKnown RBP3.82□□□□□ -1.8
CHD1-211ENST00000514344 FAM49AQ9H0Q0 323 aaPredicted RBP3.82□□□□□ -1.8
CHD1-211ENST00000514344 MLXIPQ9HAP2 919 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 IL1RAPL2Q9NP60 686 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 PADI3Q9ULW8 664 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 PCDHB7Q9Y5E2 793 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 CDY2AQ9Y6F7 541 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 ADAMTS20P59510 1910 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 FNDC1Q4ZHG4 1894 aaPredicted RBP3.82□□□□□ -1.8
CHD1-211ENST00000514344 PATJQ8NI35 1801 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 LOXHD1Q8IVV2 1947 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 DENND4AQ7Z401 1863 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 KANSL1LA0AUZ9 987 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 LILRB5O75023 590 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 RETP07949 1114 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 MYCLP12524 364 aaPredicted RBP3.81□□□□□ -1.8
CHD1-211ENST00000514344 HOXD8P13378 290 aaPredicted RBP3.81□□□□□ -1.8
CHD1-211ENST00000514344 PDE4AP27815 886 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 HOXC8P31273 242 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 ADD2P35612 726 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 NOVA1P51513 510 aaKnown RBP3.81□□□□□ -1.8
CHD1-211ENST00000514344 KRT17Q04695 432 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 SMC1AQ14683 1233 aaKnown RBP3.81□□□□□ -1.8
CHD1-211ENST00000514344 NONOQ15233 471 aaKnown RBP eCLIP3.81□□□□□ -1.8
CHD1-211ENST00000514344 FAM26DQ5JW98 314 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 ARHGEF16Q5VV41 709 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 LAIR1Q6GTX8 287 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 KIAA1211LQ6NV74 962 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 TMED8Q6PL24 325 aaPredicted RBP3.81□□□□□ -1.8
CHD1-211ENST00000514344 KCNT2Q6UVM3 1135 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.81□□□□□ -1.8
CHD1-211ENST00000514344 PDZD3Q86UT5 571 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 C12orf50Q8NA57 414 aaPredicted RBP3.81□□□□□ -1.8
CHD1-211ENST00000514344 GPKOWQ92917 476 aaPredicted RBP eCLIP3.81□□□□□ -1.8
CHD1-211ENST00000514344 MAP4K1Q92918 833 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 HNRNPABQ99729 332 aaKnown RBP3.81□□□□□ -1.8
CHD1-211ENST00000514344 C1orf115Q9H7X2 142 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 ANKFY1Q9P2R3 1169 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 TICRRQ7Z2Z1 1910 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 TM4SF5O14894 197 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 CXCL14O95715 111 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 APPP05067 770 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 UBA1P22314 1058 aaKnown RBP3.81□□□□□ -1.8
CHD1-211ENST00000514344 TDO2P48775 406 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 IGBP1P78318 339 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 GPC5P78333 572 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 ZNF252P-AS1Q0IIN9 211 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 SIM2Q14190 667 aaPredicted RBP3.81□□□□□ -1.8
CHD1-211ENST00000514344 COL28A1Q2UY09 1125 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 CELF3Q5SZQ8 465 aaKnown RBP3.81□□□□□ -1.8
CHD1-211ENST00000514344 UTP14CQ5TAP6 766 aaKnown RBP3.81□□□□□ -1.8
CHD1-211ENST00000514344 LARP1BQ659C4 914 aaKnown RBP3.81□□□□□ -1.8
CHD1-211ENST00000514344 GPR149Q86SP6 731 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 BBXQ8WY36 941 aaPredicted RBP3.81□□□□□ -1.8
CHD1-211ENST00000514344 GATA6Q92908 595 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 RPP25Q9BUL9 199 aaKnown RBP3.81□□□□□ -1.8
CHD1-211ENST00000514344 CPVLQ9H3G5 476 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 SMOC1Q9H4F8 434 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 IGSF5Q9NSI5 407 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 TELO2Q9Y4R8 837 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 ZBED9Q6R2W3 1325 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 PLA2G6O60733 806 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 EIF3JO75822 258 aaKnown RBP3.81□□□□□ -1.8
CHD1-211ENST00000514344 NR3C2P08235 984 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms