RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 TRAF6Q9Y4K3 522 aa5.82□□□□□ -1.48
CLDND1-228ENST00000513873 C1orf167Q5SNV9 1468 aa5.82□□□□□ -1.48
CLDND1-228ENST00000513873 NWD2Q9ULI1 1742 aa5.82□□□□□ -1.48
CLDND1-228ENST00000513873 TRPM1Q7Z4N2 1603 aa5.81□□□□□ -1.48
CLDND1-228ENST00000513873 MSCO60682 206 aa5.81□□□□□ -1.48
CLDND1-228ENST00000513873 SOD2P04179 222 aa5.81□□□□□ -1.48
CLDND1-228ENST00000513873 MED14OSP0DP75 135 aa5.81□□□□□ -1.48
CLDND1-228ENST00000513873 BMP7P18075 431 aa5.81□□□□□ -1.48
CLDND1-228ENST00000513873 CDR1P51861 262 aa5.81□□□□□ -1.48
CLDND1-228ENST00000513873 NCKAP1LP55160 1127 aa5.81□□□□□ -1.48
CLDND1-228ENST00000513873 ST5P78524 1137 aa5.81□□□□□ -1.48
CLDND1-228ENST00000513873 HDGFL2Q7Z4V5 671 aaPredicted RBP5.81□□□□□ -1.48
CLDND1-228ENST00000513873 GGNQ86UU5 652 aa5.81□□□□□ -1.48
CLDND1-228ENST00000513873 NLRP10Q86W26 655 aa5.81□□□□□ -1.48
CLDND1-228ENST00000513873 PANK1Q8TE04 598 aa5.81□□□□□ -1.48
CLDND1-228ENST00000513873 JAM3Q9BX67 310 aa5.81□□□□□ -1.48
CLDND1-228ENST00000513873 RNF38Q9H0F5 515 aa5.81□□□□□ -1.48
CLDND1-228ENST00000513873 STK26Q9P289 416 aa5.81□□□□□ -1.48
CLDND1-228ENST00000513873 FBLN5Q9UBX5 448 aa5.81□□□□□ -1.48
CLDND1-228ENST00000513873 SFMBT1Q9UHJ3 866 aa5.81□□□□□ -1.48
CLDND1-228ENST00000513873 PALD1Q9ULE6 856 aa5.81□□□□□ -1.48
CLDND1-228ENST00000513873 SIT1Q9Y3P8 196 aa5.81□□□□□ -1.48
CLDND1-228ENST00000513873 NALCNQ8IZF0 1738 aa5.81□□□□□ -1.48
CLDND1-228ENST00000513873 XRN1Q8IZH2 1706 aaKnown RBP5.81□□□□□ -1.48
CLDND1-228ENST00000513873 KIAA1210Q9ULL0 1709 aa5.81□□□□□ -1.48
CLDND1-228ENST00000513873 RREB1Q92766 1687 aa5.81□□□□□ -1.48
CLDND1-228ENST00000513873 PTPRUQ92729 1446 aa5.81□□□□□ -1.48
CLDND1-228ENST00000513873 ADGRL3Q9HAR2 1447 aa5.81□□□□□ -1.48
CLDND1-228ENST00000513873 TMEM131LA2VDJ0 1609 aa5.81□□□□□ -1.48
CLDND1-228ENST00000513873 KIF1BO60333 1816 aa5.81□□□□□ -1.48
CLDND1-228ENST00000513873 BRD4O60885 1362 aaPredicted RBP5.8□□□□□ -1.48
CLDND1-228ENST00000513873 LRPPRCP42704 1394 aaKnown RBP5.8□□□□□ -1.48
CLDND1-228ENST00000513873 ABCC11Q96J66 1382 aa5.8□□□□□ -1.48
CLDND1-228ENST00000513873 NPC1L1Q9UHC9 1359 aa5.8□□□□□ -1.48
CLDND1-228ENST00000513873 CGNL1Q0VF96 1302 aa5.8□□□□□ -1.48
CLDND1-228ENST00000513873 BUB1BO60566 1050 aaPredicted RBP5.8□□□□□ -1.48
CLDND1-228ENST00000513873 LINC00310P59036 64 aa5.8□□□□□ -1.48
CLDND1-228ENST00000513873 NOP9Q86U38 636 aaKnown RBP5.8□□□□□ -1.48
CLDND1-228ENST00000513873 ZC3H18Q86VM9 953 aaKnown RBP5.8□□□□□ -1.48
CLDND1-228ENST00000513873 HOMER1Q86YM7 354 aa5.8□□□□□ -1.48
CLDND1-228ENST00000513873 ZC3H7AQ8IWR0 971 aaKnown RBP5.8□□□□□ -1.48
CLDND1-228ENST00000513873 TRIM48Q8IWZ4 208 aa5.8□□□□□ -1.48
CLDND1-228ENST00000513873 Q8N1Y9 231 aa5.8□□□□□ -1.48
CLDND1-228ENST00000513873 JMYQ8N9B5 988 aa5.8□□□□□ -1.48
CLDND1-228ENST00000513873 KISS1RQ969F8 398 aaPredicted RBP5.8□□□□□ -1.48
CLDND1-228ENST00000513873 MRPL4Q9BYD3 311 aaKnown RBP5.8□□□□□ -1.48
CLDND1-228ENST00000513873 IRF2BPLQ9H1B7 796 aa5.8□□□□□ -1.48
CLDND1-228ENST00000513873 PIF1Q9H611 641 aa5.8□□□□□ -1.48
CLDND1-228ENST00000513873 NGRNQ9NPE2 291 aaKnown RBP5.8□□□□□ -1.48
CLDND1-228ENST00000513873 KCTD3Q9Y597 815 aa5.8□□□□□ -1.48
CLDND1-228ENST00000513873 PCDHB4Q9Y5E5 795 aa5.8□□□□□ -1.48
CLDND1-228ENST00000513873 HCFC2Q9Y5Z7 792 aa5.8□□□□□ -1.48
CLDND1-228ENST00000513873 ADGRB2O60241 1585 aa5.8□□□□□ -1.48
CLDND1-228ENST00000513873 NUP188Q5SRE5 1749 aa5.79□□□□□ -1.48
CLDND1-228ENST00000513873 SGSM2O43147 1006 aa5.79□□□□□ -1.48
CLDND1-228ENST00000513873 EPHB3P54753 998 aa5.79□□□□□ -1.48
CLDND1-228ENST00000513873 KRTAP1-1Q07627 177 aa5.79□□□□□ -1.48
CLDND1-228ENST00000513873 FAM47CQ5HY64 1035 aa5.79□□□□□ -1.48
CLDND1-228ENST00000513873 ETV3LQ6ZN32 361 aa5.79□□□□□ -1.48
CLDND1-228ENST00000513873 TMEM151BQ8IW70 566 aa5.79□□□□□ -1.48
CLDND1-228ENST00000513873 PHOSPHO1Q8TCT1 267 aa5.79□□□□□ -1.48
CLDND1-228ENST00000513873 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.79□□□□□ -1.48
CLDND1-228ENST00000513873 PRAM1Q96QH2 718 aa5.79□□□□□ -1.48
CLDND1-228ENST00000513873 ORAI2Q96SN7 254 aa5.79□□□□□ -1.48
CLDND1-228ENST00000513873 SMOC1Q9H4F8 434 aa5.79□□□□□ -1.48
CLDND1-228ENST00000513873 BCAS3Q9H6U6 928 aa5.79□□□□□ -1.48
CLDND1-228ENST00000513873 PCDH18Q9HCL0 1135 aa5.79□□□□□ -1.48
CLDND1-228ENST00000513873 GCM1Q9NP62 436 aa5.79□□□□□ -1.48
CLDND1-228ENST00000513873 CATSPERZQ9NTU4 200 aa5.79□□□□□ -1.48
CLDND1-228ENST00000513873 FBXL7Q9UJT9 491 aa5.79□□□□□ -1.48
CLDND1-228ENST00000513873 PCDHA8Q9Y5H6 950 aa5.79□□□□□ -1.48
CLDND1-228ENST00000513873 PCDHA5Q9Y5H7 936 aa5.79□□□□□ -1.48
CLDND1-228ENST00000513873 YTHDC2Q9H6S0 1430 aaKnown RBP5.79□□□□□ -1.48
CLDND1-228ENST00000513873 NEXMIFQ5QGS0 1516 aa5.79□□□□□ -1.48
CLDND1-228ENST00000513873 NPHP3Q7Z494 1330 aa5.78□□□□□ -1.48
CLDND1-228ENST00000513873 PLD2O14939 933 aa5.78□□□□□ -1.48
CLDND1-228ENST00000513873 CRTAMO95727 393 aa5.78□□□□□ -1.48
CLDND1-228ENST00000513873 ASGR2P07307 311 aa5.78□□□□□ -1.48
CLDND1-228ENST00000513873 SRGAP2CP0DJJ0 459 aa5.78□□□□□ -1.48
CLDND1-228ENST00000513873 PMLP29590 882 aa5.78□□□□□ -1.48
CLDND1-228ENST00000513873 WDR43Q15061 677 aaKnown RBP eCLIP5.78□□□□□ -1.48
CLDND1-228ENST00000513873 CYP4F22Q6NT55 531 aa5.78□□□□□ -1.48
CLDND1-228ENST00000513873 CNKSR3Q6P9H4 555 aa5.78□□□□□ -1.48
CLDND1-228ENST00000513873 SYNPOQ8N3V7 929 aa5.78□□□□□ -1.48
CLDND1-228ENST00000513873 NGEFQ8N5V2 710 aa5.78□□□□□ -1.48
CLDND1-228ENST00000513873 APPBP2Q92624 585 aa5.78□□□□□ -1.48
CLDND1-228ENST00000513873 FBXW5Q969U6 566 aa5.78□□□□□ -1.48
CLDND1-228ENST00000513873 CFAP53Q96M91 514 aa5.78□□□□□ -1.48
CLDND1-228ENST00000513873 IPPKQ9H8X2 491 aa5.78□□□□□ -1.48
CLDND1-228ENST00000513873 SLC6A20Q9NP91 592 aa5.78□□□□□ -1.48
CLDND1-228ENST00000513873 MYOTQ9UBF9 498 aa5.78□□□□□ -1.48
CLDND1-228ENST00000513873 ZNF652Q9Y2D9 606 aa5.78□□□□□ -1.48
CLDND1-228ENST00000513873 PCDHA9Q9Y5H5 950 aa5.78□□□□□ -1.48
CLDND1-228ENST00000513873 PLCH1Q4KWH8 1693 aa5.78□□□□□ -1.48
CLDND1-228ENST00000513873 NSD2O96028 1365 aa5.78□□□□□ -1.48
CLDND1-228ENST00000513873 IRS2Q9Y4H2 1338 aa5.77□□□□□ -1.49
CLDND1-228ENST00000513873 FAM83GA6ND36 823 aa5.77□□□□□ -1.49
CLDND1-228ENST00000513873 ADRB1P08588 477 aa5.77□□□□□ -1.49
CLDND1-228ENST00000513873 C6orf222P0C671 652 aaPredicted RBP5.77□□□□□ -1.49
CLDND1-228ENST00000513873 HSPA6P17066 643 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms