RNA–Protein interactions for RNA: ENST00000513266.5

PTPN20-228, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-228ENST00000513266 GPR149Q86SP6 731 aa11.16□□□□□ -0.62
PTPN20-228ENST00000513266 IFNL3Q8IZI9 196 aa11.16□□□□□ -0.62
PTPN20-228ENST00000513266 SLC44A3Q8N4M1 653 aa11.16□□□□□ -0.62
PTPN20-228ENST00000513266 TELO2Q9Y4R8 837 aa11.16□□□□□ -0.62
PTPN20-228ENST00000513266 PCDHB7Q9Y5E2 793 aa11.16□□□□□ -0.62
PTPN20-228ENST00000513266 SQORQ9Y6N5 450 aa11.16□□□□□ -0.62
PTPN20-228ENST00000513266 BPTFQ12830 3046 aa11.16□□□□□ -0.62
PTPN20-228ENST00000513266 SDK1Q7Z5N4 2213 aa11.15□□□□□ -0.62
PTPN20-228ENST00000513266 SMG1Q96Q15 3661 aaKnown RBP11.15□□□□□ -0.62
PTPN20-228ENST00000513266 SRRM3A6NNA2 597 aaPredicted RBP11.15□□□□□ -0.62
PTPN20-228ENST00000513266 CYSRT1A8MQ03 144 aa11.15□□□□□ -0.62
PTPN20-228ENST00000513266 GPAA1O43292 621 aa11.15□□□□□ -0.62
PTPN20-228ENST00000513266 MGEA5O60502 916 aa11.15□□□□□ -0.62
PTPN20-228ENST00000513266 APPP05067 770 aa11.15□□□□□ -0.62
PTPN20-228ENST00000513266 IFIT2P09913 472 aaKnown RBP11.15□□□□□ -0.62
PTPN20-228ENST00000513266 TGFB3P10600 412 aa11.15□□□□□ -0.62
PTPN20-228ENST00000513266 MYCLP12524 364 aaPredicted RBP11.15□□□□□ -0.62
PTPN20-228ENST00000513266 PDE4AP27815 886 aa11.15□□□□□ -0.62
PTPN20-228ENST00000513266 PPARAQ07869 468 aa11.15□□□□□ -0.62
PTPN20-228ENST00000513266 ZNF543Q08ER8 600 aa11.15□□□□□ -0.62
PTPN20-228ENST00000513266 DCLRE1AQ6PJP8 1040 aa11.15□□□□□ -0.62
PTPN20-228ENST00000513266 KCNT2Q6UVM3 1135 aa11.15□□□□□ -0.62
PTPN20-228ENST00000513266 LRRC55Q6ZSA7 311 aa11.15□□□□□ -0.62
PTPN20-228ENST00000513266 RSPH3Q86UC2 560 aa11.15□□□□□ -0.62
PTPN20-228ENST00000513266 CLASRPQ8N2M8 674 aaKnown RBP11.15□□□□□ -0.62
PTPN20-228ENST00000513266 IL31RAQ8NI17 732 aa11.15□□□□□ -0.62
PTPN20-228ENST00000513266 SLC22A17Q8WUG5 538 aa11.15□□□□□ -0.62
PTPN20-228ENST00000513266 DDX1Q92499 740 aaKnown RBP11.15□□□□□ -0.62
PTPN20-228ENST00000513266 ZFP91Q96JP5 570 aaPredicted RBP11.15□□□□□ -0.62
PTPN20-228ENST00000513266 CPVLQ9H3G5 476 aa11.15□□□□□ -0.62
PTPN20-228ENST00000513266 U3KPZ7 1027 aaPredicted RBP11.15□□□□□ -0.62
PTPN20-228ENST00000513266 ABCB11O95342 1321 aa11.14□□□□□ -0.63
PTPN20-228ENST00000513266 IGSF9BQ9UPX0 1349 aa11.14□□□□□ -0.63
PTPN20-228ENST00000513266 MBLAC1A4D2B0 266 aaPredicted RBP11.14□□□□□ -0.63
PTPN20-228ENST00000513266 NOP56O00567 594 aaKnown RBP11.14□□□□□ -0.63
PTPN20-228ENST00000513266 HSPD1P10809 573 aaKnown RBP11.14□□□□□ -0.63
PTPN20-228ENST00000513266 STARD6P59095 220 aa11.14□□□□□ -0.63
PTPN20-228ENST00000513266 PAK2Q13177 524 aa11.14□□□□□ -0.63
PTPN20-228ENST00000513266 LPAL2Q16609 132 aa11.14□□□□□ -0.63
PTPN20-228ENST00000513266 LETM2Q2VYF4 491 aa11.14□□□□□ -0.63
PTPN20-228ENST00000513266 MARCH8Q5T0T0 291 aa11.14□□□□□ -0.63
PTPN20-228ENST00000513266 UTP14CQ5TAP6 766 aaKnown RBP11.14□□□□□ -0.63
PTPN20-228ENST00000513266 CEP85Q6P2H3 762 aa11.14□□□□□ -0.63
PTPN20-228ENST00000513266 PRR23CQ6ZRP0 262 aa11.14□□□□□ -0.63
PTPN20-228ENST00000513266 ZBTB10Q96DT7 871 aa11.14□□□□□ -0.63
PTPN20-228ENST00000513266 TMEM47Q9BQJ4 181 aa11.14□□□□□ -0.63
PTPN20-228ENST00000513266 PDCD2LQ9BRP1 358 aa11.14□□□□□ -0.63
PTPN20-228ENST00000513266 TMEM121BQ9BXQ6 578 aaPredicted RBP11.14□□□□□ -0.63
PTPN20-228ENST00000513266 BCL11AQ9H165 835 aa11.14□□□□□ -0.63
PTPN20-228ENST00000513266 TUBE1Q9UJT0 475 aa11.14□□□□□ -0.63
PTPN20-228ENST00000513266 ZNF215Q9UL58 517 aaPredicted RBP11.14□□□□□ -0.63
PTPN20-228ENST00000513266 SPAG17Q6Q759 2223 aa11.13□□□□□ -0.63
PTPN20-228ENST00000513266 PATL2C9JE40 543 aaKnown RBP11.13□□□□□ -0.63
PTPN20-228ENST00000513266 M0R2C6 588 aa11.13□□□□□ -0.63
PTPN20-228ENST00000513266 TM4SF5O14894 197 aa11.13□□□□□ -0.63
PTPN20-228ENST00000513266 IPO8O15397 1037 aaKnown RBP11.13□□□□□ -0.63
PTPN20-228ENST00000513266 LRP3O75074 770 aa11.13□□□□□ -0.63
PTPN20-228ENST00000513266 SLC3A2P08195 630 aaKnown RBP11.13□□□□□ -0.63
PTPN20-228ENST00000513266 FGFR1P11362 822 aa11.13□□□□□ -0.63
PTPN20-228ENST00000513266 TOP1P11387 765 aaKnown RBP11.13□□□□□ -0.63
PTPN20-228ENST00000513266 GNAT2P19087 354 aa11.13□□□□□ -0.63
PTPN20-228ENST00000513266 KRT17Q04695 432 aa11.13□□□□□ -0.63
PTPN20-228ENST00000513266 NONOQ15233 471 aaKnown RBP eCLIP11.13□□□□□ -0.63
PTPN20-228ENST00000513266 PTPN14Q15678 1187 aa11.13□□□□□ -0.63
PTPN20-228ENST00000513266 TMEM266Q2M3C6 531 aa11.13□□□□□ -0.63
PTPN20-228ENST00000513266 TSSK4Q6SA08 328 aa11.13□□□□□ -0.63
PTPN20-228ENST00000513266 VSIG10LQ86VR7 867 aa11.13□□□□□ -0.63
PTPN20-228ENST00000513266 MCF2L2Q86YR7 1114 aa11.13□□□□□ -0.63
PTPN20-228ENST00000513266 APPBP2Q92624 585 aa11.13□□□□□ -0.63
PTPN20-228ENST00000513266 MAP4K1Q92918 833 aa11.13□□□□□ -0.63
PTPN20-228ENST00000513266 BCO2Q9BYV7 579 aa11.13□□□□□ -0.63
PTPN20-228ENST00000513266 SFXN1Q9H9B4 322 aa11.13□□□□□ -0.63
PTPN20-228ENST00000513266 SEMA4GQ9NTN9 838 aa11.13□□□□□ -0.63
PTPN20-228ENST00000513266 SPG21Q9NZD8 308 aa11.13□□□□□ -0.63
PTPN20-228ENST00000513266 MTCL1Q9Y4B5 1905 aaKnown RBP11.13□□□□□ -0.63
PTPN20-228ENST00000513266 C9IYK1 514 aa11.12□□□□□ -0.63
PTPN20-228ENST00000513266 OPLAHO14841 1288 aa11.12□□□□□ -0.63
PTPN20-228ENST00000513266 CXCL14O95715 111 aa11.12□□□□□ -0.63
PTPN20-228ENST00000513266 SNHG28P0DPA3 235 aa11.12□□□□□ -0.63
PTPN20-228ENST00000513266 PPM1AP35813 382 aa11.12□□□□□ -0.63
PTPN20-228ENST00000513266 CTDSPL2Q05D32 466 aa11.12□□□□□ -0.63
PTPN20-228ENST00000513266 TMEM62Q0P6H9 643 aa11.12□□□□□ -0.63
PTPN20-228ENST00000513266 PPFIA1Q13136 1202 aa11.12□□□□□ -0.63
PTPN20-228ENST00000513266 PGM5Q15124 567 aa11.12□□□□□ -0.63
PTPN20-228ENST00000513266 GRIK4Q16099 956 aa11.12□□□□□ -0.63
PTPN20-228ENST00000513266 CDC37Q16543 378 aaPredicted RBP11.12□□□□□ -0.63
PTPN20-228ENST00000513266 LAIR1Q6GTX8 287 aa11.12□□□□□ -0.63
PTPN20-228ENST00000513266 CYFIP1Q7L576 1253 aa11.12□□□□□ -0.63
PTPN20-228ENST00000513266 CABP7Q86V35 215 aa11.12□□□□□ -0.63
PTPN20-228ENST00000513266 AUTS2Q8WXX7 1259 aa11.12□□□□□ -0.63
PTPN20-228ENST00000513266 FRAT1Q92837 279 aaPredicted RBP11.12□□□□□ -0.63
PTPN20-228ENST00000513266 ZNF558Q96NG5 402 aa11.12□□□□□ -0.63
PTPN20-228ENST00000513266 FAM49AQ9H0Q0 323 aaPredicted RBP11.12□□□□□ -0.63
PTPN20-228ENST00000513266 SLC2A4RGQ9NR83 387 aa11.12□□□□□ -0.63
PTPN20-228ENST00000513266 EPS15L1Q9UBC2 864 aa11.12□□□□□ -0.63
PTPN20-228ENST00000513266 MTF2Q9Y483 593 aaPredicted RBP11.12□□□□□ -0.63
PTPN20-228ENST00000513266 TRPV2Q9Y5S1 764 aa11.12□□□□□ -0.63
PTPN20-228ENST00000513266 RANBP6O60518 1105 aaKnown RBP11.11□□□□□ -0.63
PTPN20-228ENST00000513266 CFBP00751 764 aa11.11□□□□□ -0.63
PTPN20-228ENST00000513266 NCLP19338 710 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms