RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 BMP3P12645 472 aa9.56□□□□□ -0.88
VCAN-208ENST00000512590 LMNB2Q03252 620 aa9.56□□□□□ -0.88
VCAN-208ENST00000512590 PTH1RQ03431 593 aa9.56□□□□□ -0.88
VCAN-208ENST00000512590 TAF1BQ53T94 588 aaPredicted RBP9.56□□□□□ -0.88
VCAN-208ENST00000512590 IFNL3Q8IZI9 196 aa9.56□□□□□ -0.88
VCAN-208ENST00000512590 CFAP61Q8NHU2 1237 aa9.56□□□□□ -0.88
VCAN-208ENST00000512590 COPG1Q9Y678 874 aaKnown RBP9.56□□□□□ -0.88
VCAN-208ENST00000512590 AKR1B15C9JRZ8 316 aaPredicted RBP9.56□□□□□ -0.88
VCAN-208ENST00000512590 RNF40O75150 1001 aa9.56□□□□□ -0.88
VCAN-208ENST00000512590 BBOX1O75936 387 aa9.56□□□□□ -0.88
VCAN-208ENST00000512590 RASSF2P50749 326 aa9.56□□□□□ -0.88
VCAN-208ENST00000512590 SYNE4Q8N205 404 aa9.56□□□□□ -0.88
VCAN-208ENST00000512590 SYMPKQ92797 1274 aaKnown RBP9.56□□□□□ -0.88
VCAN-208ENST00000512590 MIR1-1HGQ9H1L0 117 aa9.56□□□□□ -0.88
VCAN-208ENST00000512590 IARS2Q9NSE4 1012 aaKnown RBP9.56□□□□□ -0.88
VCAN-208ENST00000512590 SEMA3EO15041 775 aa9.56□□□□□ -0.88
VCAN-208ENST00000512590 PEX1O43933 1283 aa9.56□□□□□ -0.88
VCAN-208ENST00000512590 OPHN1O60890 802 aa9.56□□□□□ -0.88
VCAN-208ENST00000512590 MPOP05164 745 aa9.56□□□□□ -0.88
VCAN-208ENST00000512590 PPP1R2P3Q6NXS1 205 aa9.56□□□□□ -0.88
VCAN-208ENST00000512590 KBTBD3Q8NAB2 608 aa9.56□□□□□ -0.88
VCAN-208ENST00000512590 POMGNT2Q8NAT1 580 aa9.56□□□□□ -0.88
VCAN-208ENST00000512590 LEMD2Q8NC56 503 aa9.56□□□□□ -0.88
VCAN-208ENST00000512590 FAM81BQ96LP2 452 aa9.56□□□□□ -0.88
VCAN-208ENST00000512590 SPATA33Q96N06 139 aa9.56□□□□□ -0.88
VCAN-208ENST00000512590 NLNQ9BYT8 704 aa9.56□□□□□ -0.88
VCAN-208ENST00000512590 KCNH3Q9ULD8 1083 aa9.56□□□□□ -0.88
VCAN-208ENST00000512590 KCNB1Q14721 858 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 MGAT5BQ3V5L5 792 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 SYDE2Q5VT97 1194 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 PALB2Q86YC2 1186 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 MB21D1Q8N884 522 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 OSBPL6Q9BZF3 934 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 UNC45AQ9H3U1 944 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 CCDC189A1A4V9 331 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 HMBSP08397 361 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 JAK1P23458 1154 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 EEF1GP26641 437 aaKnown RBP9.55□□□□□ -0.88
VCAN-208ENST00000512590 LRRC74AQ0VAA2 488 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 DIS3LQ8TF46 1054 aaKnown RBP9.55□□□□□ -0.88
VCAN-208ENST00000512590 KLHL8Q9P2G9 620 aaPredicted RBP9.55□□□□□ -0.88
VCAN-208ENST00000512590 ZNF804BA4D1E1 1349 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 AFF2P51816 1311 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 SERPINI2O75830 405 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 A1BGP04217 495 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 OR52Z1P0C646 297 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 TECP42680 631 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 DHX32Q7L7V1 743 aaKnown RBP9.55□□□□□ -0.88
VCAN-208ENST00000512590 CCDC84Q86UT8 332 aaPredicted RBP9.55□□□□□ -0.88
VCAN-208ENST00000512590 RNF10Q8N5U6 811 aaKnown RBP9.55□□□□□ -0.88
VCAN-208ENST00000512590 TADA1Q96BN2 335 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 ZNF594Q96JF6 807 aaPredicted RBP9.55□□□□□ -0.88
VCAN-208ENST00000512590 NUDT12Q9BQG2 462 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 WDR11Q9BZH6 1224 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 BCL2L14Q9BZR8 327 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 TXLNGQ9NUQ3 528 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 TMEM39AQ9NV64 488 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 TMEM161AQ9NX61 479 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 LEMD3Q9Y2U8 911 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 PCDHA5Q9Y5H7 936 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 ELP1O95163 1332 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 MYO3BQ8WXR4 1341 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 USP17L5A8MUK1 530 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 EBAG9O00559 213 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 OR1G1P47890 313 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 UBE2HP62256 183 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 MTMR3Q13615 1198 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 GSTA3Q16772 222 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 KDELC2Q7Z4H8 507 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 CARD9Q9H257 536 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 MCM8Q9UJA3 840 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 SYNRGQ9UMZ2 1314 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.55□□□□□ -0.88
VCAN-208ENST00000512590 IQANK1A0A1B0GTG1 560 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 H2AFYO75367 372 aaKnown RBP9.55□□□□□ -0.88
VCAN-208ENST00000512590 CCDC130P13994 396 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 EIF2AK2P19525 551 aaKnown RBP9.55□□□□□ -0.88
VCAN-208ENST00000512590 CUL4AQ13619 759 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 KYNUQ16719 465 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 CEP55Q53EZ4 464 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 IER5Q5VY09 327 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 PHLDB3Q6NSJ2 640 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 KCTD1Q719H9 257 aa9.55□□□□□ -0.88
VCAN-208ENST00000512590 RIN2Q8WYP3 895 aaPredicted RBP9.55□□□□□ -0.88
VCAN-208ENST00000512590 BFSP2Q13515 415 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 ARMC2Q8NEN0 867 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 KIFC3Q9BVG8 833 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 TRIT1Q9H3H1 467 aaKnown RBP9.54□□□□□ -0.88
VCAN-208ENST00000512590 SLC39A10Q9ULF5 831 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 DHX29Q7Z478 1369 aaKnown RBP9.54□□□□□ -0.88
VCAN-208ENST00000512590 MAP3K5Q99683 1374 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 GOLGA8HP0CJ92 632 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 KCNA6P17658 529 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 MAGEA1P43355 309 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 TUBB4BP68371 445 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 PPARAQ07869 468 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 ART3Q13508 389 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 GCKRQ14397 625 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 PAN2Q504Q3 1202 aaKnown RBP9.54□□□□□ -0.88
VCAN-208ENST00000512590 TBC1D9Q6ZT07 1266 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms