RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 CAPN9O14815 690 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 ZBTB43O43298 467 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 MAN1A2O60476 641 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 CILPO75339 1184 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 KIAA0754O94854 1291 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 SFTPCP11686 197 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 POLD2P49005 469 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 MXI1P50539 228 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 PMS2P11Q13670 270 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 WTAPQ15007 396 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 ARHGEF18Q6ZSZ5 1173 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 NOSTRINQ8IVI9 506 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 DRAXINQ8NBI3 349 aaPredicted RBP7□□□□□ -1.29
TRAPPC11-209ENST00000512476 TGFBRAP1Q8WUH2 860 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 SLC10A4Q96EP9 437 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 FAM81BQ96LP2 452 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 FAM204AQ9H8W3 233 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 TMPRSS4Q9NRS4 437 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 POGKQ9P215 609 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 KANSL3Q9P2N6 904 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 ORC3Q9UBD5 711 aaPredicted RBP7□□□□□ -1.29
TRAPPC11-209ENST00000512476 VPS28Q9UK41 221 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 RRP7AQ9Y3A4 280 aaKnown RBP7□□□□□ -1.29
TRAPPC11-209ENST00000512476 TRAV20A0A0B4J274 112 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 CCDC66A2RUB6 948 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 IRAK2O43187 625 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 PRODHO43272 600 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 COBLO75128 1261 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 TRPA1O75762 1119 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 RAG1P15918 1043 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 STMN1P16949 149 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 ACSL1P33121 698 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 ZNF157P51786 506 aaPredicted RBP7□□□□□ -1.29
TRAPPC11-209ENST00000512476 NRG1Q02297 640 aaPredicted RBP7□□□□□ -1.29
TRAPPC11-209ENST00000512476 AIMP1Q12904 312 aaKnown RBP7□□□□□ -1.29
TRAPPC11-209ENST00000512476 ERV3-1Q14264 604 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 SF1Q15637 639 aaKnown RBP7□□□□□ -1.29
TRAPPC11-209ENST00000512476 LINC01559Q495D7 138 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 KRTCAP3Q53RY4 240 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 DGKKQ5KSL6 1271 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 KLHDC7AQ5VTJ3 777 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 DTHD1Q6ZMT9 781 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 DENND5BQ6ZUT9 1274 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 SV2BQ7L1I2 683 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 GALNT7Q86SF2 657 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 ZNF295-AS1Q8N0V1 137 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 SEPT1Q8WYJ6 367 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 RABGGTAQ92696 567 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 SYAP1Q96A49 352 aaPredicted RBP7□□□□□ -1.29
TRAPPC11-209ENST00000512476 FNBP1Q96RU3 617 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 CCDC68Q9H2F9 335 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 ARGLU1Q9NWB6 273 aaPredicted RBP7□□□□□ -1.29
TRAPPC11-209ENST00000512476 ZNF624Q9P2J8 865 aaPredicted RBP7□□□□□ -1.29
TRAPPC11-209ENST00000512476 APEX2Q9UBZ4 518 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 PCSK1NQ9UHG2 260 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 RTCBQ9Y3I0 505 aaKnown RBP7□□□□□ -1.29
TRAPPC11-209ENST00000512476 KNSTRNQ9Y448 316 aa7□□□□□ -1.29
TRAPPC11-209ENST00000512476 GLRX3O76003 335 aaKnown RBP6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 PGM3O95394 542 aa6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 P4HA1P13674 534 aa6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 DPP6P42658 865 aa6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 AFF3P51826 1226 aaKnown RBP6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 KIF11P52732 1056 aa6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 PPP5CP53041 499 aa6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 ATN1P54259 1190 aaPredicted RBP6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 TGFB2P61812 414 aa6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 NAA25Q14CX7 972 aa6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 ANKRD1Q15327 319 aa6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 MTFR1Q15390 333 aa6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 FAM26FQ5R3K3 315 aa6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 KDELC1Q6UW63 502 aa6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 XKR5Q6UX68 686 aa6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 MPRIPQ6WCQ1 1025 aa6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 SAMD7Q7Z3H4 446 aa6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 SCUBE1Q8IWY4 988 aa6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 FAM13CQ8NE31 585 aa6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 JADE3Q92613 823 aa6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 ACAT2Q9BWD1 397 aa6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 CCDC177Q9NQR7 707 aaPredicted RBP6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 THG1LQ9NWX6 298 aaKnown RBP6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 NSMCE4AQ9NXX6 385 aa6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 SALL4Q9UJQ4 1053 aa6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 ZFP37Q9Y6Q3 630 aaPredicted RBP6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 KDM5BQ9UGL1 1544 aa6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 INO80B-WBP1J3KQ70 363 aa6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 ERAL1O75616 437 aaKnown RBP6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 PAHP00439 452 aa6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 HRGP04196 525 aa6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 ASLP04424 464 aa6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 CYP2E1P05181 493 aaPredicted RBP6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 MSL3P1P0C860 447 aa6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 PABPC1P11940 636 aaKnown RBP6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 ATP5F1P24539 256 aaPredicted RBP6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 SKIV2L2P42285 1042 aaKnown RBP6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 GSK3AP49840 483 aa6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 SMTNP53814 917 aa6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 WNT7BP56706 349 aa6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 C21orf58P58505 322 aa6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 PLCL1Q15111 1095 aa6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 RPS26P11Q5JNZ5 115 aaPredicted RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms