RNA–Protein interactions for RNA: ENST00000511092.5

CLCN3-207, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-207ENST00000511092 VRTNQ9H8Y1 702 aa7.5□□□□□ -1.21
CLCN3-207ENST00000511092 HSPBP1Q9NZL4 362 aa7.5□□□□□ -1.21
CLCN3-207ENST00000511092 FBXO4Q9UKT5 387 aa7.5□□□□□ -1.21
CLCN3-207ENST00000511092 SIT1Q9Y3P8 196 aa7.5□□□□□ -1.21
CLCN3-207ENST00000511092 PCDHGC4Q9Y5F7 938 aa7.5□□□□□ -1.21
CLCN3-207ENST00000511092 SPTBN1Q01082 2364 aaKnown RBP7.5□□□□□ -1.21
CLCN3-207ENST00000511092 CSMD1Q96PZ7 3565 aa7.49□□□□□ -1.21
CLCN3-207ENST00000511092 SERTM1A2A2V5 107 aa7.49□□□□□ -1.21
CLCN3-207ENST00000511092 USP17L10C9JJH3 530 aa7.49□□□□□ -1.21
CLCN3-207ENST00000511092 C5orf67F2Z3F1 127 aa7.49□□□□□ -1.21
CLCN3-207ENST00000511092 M0R2N6 131 aa7.49□□□□□ -1.21
CLCN3-207ENST00000511092 GRM8O00222 908 aa7.49□□□□□ -1.21
CLCN3-207ENST00000511092 LAMTOR5O43504 91 aa7.49□□□□□ -1.21
CLCN3-207ENST00000511092 EFCAB14O75071 495 aa7.49□□□□□ -1.21
CLCN3-207ENST00000511092 BMP4P12644 408 aa7.49□□□□□ -1.21
CLCN3-207ENST00000511092 FGFR3P22607 806 aa7.49□□□□□ -1.21
CLCN3-207ENST00000511092 TXLNAP40222 546 aa7.49□□□□□ -1.21
CLCN3-207ENST00000511092 SEC13P55735 322 aa7.49□□□□□ -1.21
CLCN3-207ENST00000511092 EXOSC9Q06265 439 aaKnown RBP7.49□□□□□ -1.21
CLCN3-207ENST00000511092 CCDC57Q2TAC2 916 aa7.49□□□□□ -1.21
CLCN3-207ENST00000511092 CCDC144BQ3MJ40 725 aa7.49□□□□□ -1.21
CLCN3-207ENST00000511092 CATSPERGQ6ZRH7 1159 aa7.49□□□□□ -1.21
CLCN3-207ENST00000511092 WDR63Q8IWG1 891 aa7.49□□□□□ -1.21
CLCN3-207ENST00000511092 RETREG2Q8NC44 543 aa7.49□□□□□ -1.21
CLCN3-207ENST00000511092 TSEN2Q8NCE0 465 aaKnown RBP7.49□□□□□ -1.21
CLCN3-207ENST00000511092 FEZF2Q8TBJ5 459 aa7.49□□□□□ -1.21
CLCN3-207ENST00000511092 MDM1Q8TC05 714 aa7.49□□□□□ -1.21
CLCN3-207ENST00000511092 C11orf84Q9BUA3 381 aaPredicted RBP7.49□□□□□ -1.21
CLCN3-207ENST00000511092 MRIQ9BWK5 157 aa7.49□□□□□ -1.21
CLCN3-207ENST00000511092 TRIM4Q9C037 500 aa7.49□□□□□ -1.21
CLCN3-207ENST00000511092 TSPAN10Q9H1Z9 355 aaPredicted RBP7.49□□□□□ -1.21
CLCN3-207ENST00000511092 ZNF768Q9H5H4 540 aaKnown RBP7.49□□□□□ -1.21
CLCN3-207ENST00000511092 SPC25Q9HBM1 224 aa7.49□□□□□ -1.21
CLCN3-207ENST00000511092 NEUROD4Q9HD90 331 aa7.49□□□□□ -1.21
CLCN3-207ENST00000511092 CNNM1Q9NRU3 951 aa7.49□□□□□ -1.21
CLCN3-207ENST00000511092 ASCC3Q8N3C0 2202 aaKnown RBP7.49□□□□□ -1.21
CLCN3-207ENST00000511092 MTORP42345 2549 aa7.49□□□□□ -1.21
CLCN3-207ENST00000511092 ATG2BQ96BY7 2078 aa7.48□□□□□ -1.21
CLCN3-207ENST00000511092 ABHD14A-ACY1A0A1B0GW23 586 aa7.48□□□□□ -1.21
CLCN3-207ENST00000511092 USP17L15C9J2P7 530 aa7.48□□□□□ -1.21
CLCN3-207ENST00000511092 USP17L13C9JLJ4 530 aa7.48□□□□□ -1.21
CLCN3-207ENST00000511092 USP17L11C9JVI0 530 aa7.48□□□□□ -1.21
CLCN3-207ENST00000511092 USP17L18D6R9N7 530 aa7.48□□□□□ -1.21
CLCN3-207ENST00000511092 USP17L22D6RA61 530 aa7.48□□□□□ -1.21
CLCN3-207ENST00000511092 USP17L17D6RBQ6 530 aa7.48□□□□□ -1.21
CLCN3-207ENST00000511092 USP17L19D6RCP7 530 aa7.48□□□□□ -1.21
CLCN3-207ENST00000511092 USP17L20D6RJB6 530 aa7.48□□□□□ -1.21
CLCN3-207ENST00000511092 ENTPD3O75355 529 aa7.48□□□□□ -1.21
CLCN3-207ENST00000511092 USP17L24Q0WX57 530 aa7.48□□□□□ -1.21
CLCN3-207ENST00000511092 TDGQ13569 410 aa7.48□□□□□ -1.21
CLCN3-207ENST00000511092 TAF7LQ5H9L4 462 aa7.48□□□□□ -1.21
CLCN3-207ENST00000511092 SH3PXD2AQ5TCZ1 1133 aa7.48□□□□□ -1.21
CLCN3-207ENST00000511092 ZDHHC14Q8IZN3 488 aa7.48□□□□□ -1.21
CLCN3-207ENST00000511092 TDRD5Q8NAT2 981 aaKnown RBP7.48□□□□□ -1.21
CLCN3-207ENST00000511092 PJA1Q8NG27 643 aa7.48□□□□□ -1.21
CLCN3-207ENST00000511092 NEDD1Q8NHV4 660 aa7.48□□□□□ -1.21
CLCN3-207ENST00000511092 OXCT2Q9BYC2 517 aaPredicted RBP7.48□□□□□ -1.21
CLCN3-207ENST00000511092 SMOC1Q9H4F8 434 aa7.48□□□□□ -1.21
CLCN3-207ENST00000511092 C9orf78Q9NZ63 289 aaPredicted RBP7.48□□□□□ -1.21
CLCN3-207ENST00000511092 RAB23Q9ULC3 237 aa7.48□□□□□ -1.21
CLCN3-207ENST00000511092 ABCA2Q9BZC7 2435 aa7.48□□□□□ -1.21
CLCN3-207ENST00000511092 ICE1Q9Y2F5 2266 aa7.48□□□□□ -1.21
CLCN3-207ENST00000511092 PCNX2A6NKB5 2137 aa7.48□□□□□ -1.21
CLCN3-207ENST00000511092 MYH15Q9Y2K3 1946 aa7.47□□□□□ -1.21
CLCN3-207ENST00000511092 C19orf81C9J6K1 198 aa7.47□□□□□ -1.21
CLCN3-207ENST00000511092 OIP5O43482 229 aa7.47□□□□□ -1.21
CLCN3-207ENST00000511092 ALDH1L1O75891 902 aa7.47□□□□□ -1.21
CLCN3-207ENST00000511092 CXCL10P02778 98 aa7.47□□□□□ -1.21
CLCN3-207ENST00000511092 BMPR1AP36894 532 aa7.47□□□□□ -1.21
CLCN3-207ENST00000511092 TECP42680 631 aa7.47□□□□□ -1.21
CLCN3-207ENST00000511092 PSMA6P60900 246 aaKnown RBP7.47□□□□□ -1.21
CLCN3-207ENST00000511092 ANKRD54Q6NXT1 300 aa7.47□□□□□ -1.21
CLCN3-207ENST00000511092 ABRAQ8N0Z2 381 aa7.47□□□□□ -1.21
CLCN3-207ENST00000511092 IDI2Q9BXS1 227 aa7.47□□□□□ -1.21
CLCN3-207ENST00000511092 SIL1Q9H173 461 aa7.47□□□□□ -1.21
CLCN3-207ENST00000511092 GPR108Q9NPR9 543 aa7.47□□□□□ -1.21
CLCN3-207ENST00000511092 JADE2Q9NQC1 790 aa7.47□□□□□ -1.21
CLCN3-207ENST00000511092 NDFIP2Q9NV92 336 aa7.47□□□□□ -1.21
CLCN3-207ENST00000511092 ADGRG4Q8IZF6 3080 aa7.47□□□□□ -1.21
CLCN3-207ENST00000511092 KHNYNO15037 678 aaKnown RBP7.46□□□□□ -1.22
CLCN3-207ENST00000511092 CABYRO75952 493 aa7.46□□□□□ -1.22
CLCN3-207ENST00000511092 DKK1O94907 266 aa7.46□□□□□ -1.22
CLCN3-207ENST00000511092 IGHA1P01876 353 aa7.46□□□□□ -1.22
CLCN3-207ENST00000511092 NBPF7P0C2Y1 421 aaPredicted RBP7.46□□□□□ -1.22
CLCN3-207ENST00000511092 SUPT20HL2P0C7V6 817 aa7.46□□□□□ -1.22
CLCN3-207ENST00000511092 FCER1AP12319 257 aa7.46□□□□□ -1.22
CLCN3-207ENST00000511092 KRT10P13645 584 aa7.46□□□□□ -1.22
CLCN3-207ENST00000511092 VCAM1P19320 739 aa7.46□□□□□ -1.22
CLCN3-207ENST00000511092 NKX3-2P78367 333 aa7.46□□□□□ -1.22
CLCN3-207ENST00000511092 CTBSQ01459 385 aa7.46□□□□□ -1.22
CLCN3-207ENST00000511092 SRSF5Q13243 272 aaKnown RBP7.46□□□□□ -1.22
CLCN3-207ENST00000511092 LY6DQ14210 128 aa7.46□□□□□ -1.22
CLCN3-207ENST00000511092 PLS1Q14651 629 aa7.46□□□□□ -1.22
CLCN3-207ENST00000511092 FSCN1Q16658 493 aaKnown RBP7.46□□□□□ -1.22
CLCN3-207ENST00000511092 CRTC2Q53ET0 693 aaPredicted RBP7.46□□□□□ -1.22
CLCN3-207ENST00000511092 FBXO33Q7Z6M2 555 aa7.46□□□□□ -1.22
CLCN3-207ENST00000511092 TBC1D22AQ8WUA7 517 aa7.46□□□□□ -1.22
CLCN3-207ENST00000511092 BORCS6Q96GS4 357 aa7.46□□□□□ -1.22
CLCN3-207ENST00000511092 KAZALD1Q96I82 304 aa7.46□□□□□ -1.22
CLCN3-207ENST00000511092 MMP19Q99542 508 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms