RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 METTL13Q8N6R0 699 aa16.14■□□□□ 0.17
USP38-202ENST00000510377 KLHL29Q96CT2 875 aa16.14■□□□□ 0.17
USP38-202ENST00000510377 GDF11O95390 407 aa16.14■□□□□ 0.17
USP38-202ENST00000510377 ITGA4P13612 1032 aa16.14■□□□□ 0.17
USP38-202ENST00000510377 PCK1P35558 622 aa16.14■□□□□ 0.17
USP38-202ENST00000510377 CCDC13Q8IYE1 715 aa16.14■□□□□ 0.17
USP38-202ENST00000510377 UBE2TQ9NPD8 197 aaPredicted RBP16.14■□□□□ 0.17
USP38-202ENST00000510377 FAM107AO95990 144 aa16.14■□□□□ 0.17
USP38-202ENST00000510377 PSMC2P35998 433 aaKnown RBP16.14■□□□□ 0.17
USP38-202ENST00000510377 ADCY8P40145 1251 aa16.14■□□□□ 0.17
USP38-202ENST00000510377 FIGNQ5HY92 759 aa16.14■□□□□ 0.17
USP38-202ENST00000510377 NUGGCQ68CJ6 796 aa16.14■□□□□ 0.17
USP38-202ENST00000510377 FBXO11Q86XK2 927 aa16.14■□□□□ 0.17
USP38-202ENST00000510377 PARP9Q8IXQ6 854 aa16.14■□□□□ 0.17
USP38-202ENST00000510377 GLG1Q92896 1179 aa16.14■□□□□ 0.17
USP38-202ENST00000510377 SLC40A1Q9NP59 571 aa16.14■□□□□ 0.17
USP38-202ENST00000510377 THAP12O43422 761 aa16.13■□□□□ 0.17
USP38-202ENST00000510377 RPS6KA5O75582 802 aa16.13■□□□□ 0.17
USP38-202ENST00000510377 GCFC2P16383 781 aaKnown RBP16.13■□□□□ 0.17
USP38-202ENST00000510377 KRT15P19012 456 aa16.13■□□□□ 0.17
USP38-202ENST00000510377 SLC8A1P32418 973 aa16.13■□□□□ 0.17
USP38-202ENST00000510377 GALCP54803 685 aa16.13■□□□□ 0.17
USP38-202ENST00000510377 CYP4F22Q6NT55 531 aa16.13■□□□□ 0.17
USP38-202ENST00000510377 KDM7AQ6ZMT4 941 aa16.13■□□□□ 0.17
USP38-202ENST00000510377 SEC16BQ96JE7 1060 aa16.13■□□□□ 0.17
USP38-202ENST00000510377 K7ENM7 598 aa16.13■□□□□ 0.17
USP38-202ENST00000510377 FGFR4P22455 802 aa16.13■□□□□ 0.17
USP38-202ENST00000510377 DRAP1Q14919 205 aaPredicted RBP16.13■□□□□ 0.17
USP38-202ENST00000510377 NPY5RQ15761 445 aa16.13■□□□□ 0.17
USP38-202ENST00000510377 KNOP1Q1ED39 458 aaKnown RBP16.13■□□□□ 0.17
USP38-202ENST00000510377 EDEM3Q9BZQ6 932 aa16.13■□□□□ 0.17
USP38-202ENST00000510377 EHMT1Q9H9B1 1298 aa16.13■□□□□ 0.17
USP38-202ENST00000510377 AFDNP55196 1824 aaKnown RBP16.13■□□□□ 0.17
USP38-202ENST00000510377 LRRC37A3O60309 1634 aa16.13■□□□□ 0.17
USP38-202ENST00000510377 ZNF233A6NK53 670 aa16.13■□□□□ 0.17
USP38-202ENST00000510377 KIRREL3Q8IZU9 778 aa16.13■□□□□ 0.17
USP38-202ENST00000510377 HOOK2Q96ED9 719 aa16.13■□□□□ 0.17
USP38-202ENST00000510377 FAM212AQ96EL1 285 aa16.13■□□□□ 0.17
USP38-202ENST00000510377 SALL4Q9UJQ4 1053 aa16.13■□□□□ 0.17
USP38-202ENST00000510377 LEMD3Q9Y2U8 911 aa16.13■□□□□ 0.17
USP38-202ENST00000510377 NALCNQ8IZF0 1738 aa16.13■□□□□ 0.17
USP38-202ENST00000510377 PALM3A6NDB9 673 aaPredicted RBP16.13■□□□□ 0.17
USP38-202ENST00000510377 PRLRP16471 622 aa16.13■□□□□ 0.17
USP38-202ENST00000510377 MYO1EQ12965 1108 aa16.13■□□□□ 0.17
USP38-202ENST00000510377 NFIXQ14938 502 aa16.13■□□□□ 0.17
USP38-202ENST00000510377 CHMP6Q96FZ7 201 aa16.13■□□□□ 0.17
USP38-202ENST00000510377 TRIM7Q9C029 511 aa16.13■□□□□ 0.17
USP38-202ENST00000510377 SLC24A3Q9HC58 644 aa16.13■□□□□ 0.17
USP38-202ENST00000510377 RGL1Q9NZL6 768 aa16.13■□□□□ 0.17
USP38-202ENST00000510377 SIK3Q9Y2K2 1263 aa16.13■□□□□ 0.17
USP38-202ENST00000510377 RGPD2P0DJD1 1756 aa16.12■□□□□ 0.17
USP38-202ENST00000510377 HARSP12081 509 aaKnown RBP16.12■□□□□ 0.17
USP38-202ENST00000510377 GCKP35557 465 aa16.12■□□□□ 0.17
USP38-202ENST00000510377 ERVK-9P63128 1117 aa16.12■□□□□ 0.17
USP38-202ENST00000510377 C10orf76Q5T2E6 689 aa16.12■□□□□ 0.17
USP38-202ENST00000510377 GPATCH4Q5T3I0 446 aaKnown RBP16.12■□□□□ 0.17
USP38-202ENST00000510377 GLT8D2Q9H1C3 349 aa16.12■□□□□ 0.17
USP38-202ENST00000510377 DHX36Q9H2U1 1008 aaKnown RBP16.12■□□□□ 0.17
USP38-202ENST00000510377 ATF5Q9Y2D1 282 aaPredicted RBP16.12■□□□□ 0.17
USP38-202ENST00000510377 MYBP10242 640 aa16.12■□□□□ 0.17
USP38-202ENST00000510377 PMS2P54278 862 aa16.12■□□□□ 0.17
USP38-202ENST00000510377 CDK17Q00537 523 aa16.12■□□□□ 0.17
USP38-202ENST00000510377 CLEC4GQ6UXB4 293 aa16.12■□□□□ 0.17
USP38-202ENST00000510377 RPAINQ86UA6 219 aa16.12■□□□□ 0.17
USP38-202ENST00000510377 TBC1D22AQ8WUA7 517 aa16.12■□□□□ 0.17
USP38-202ENST00000510377 RBM17Q96I25 401 aaKnown RBP16.12■□□□□ 0.17
USP38-202ENST00000510377 ICA1Q05084 483 aa16.12■□□□□ 0.17
USP38-202ENST00000510377 SEPT2Q15019 361 aa16.12■□□□□ 0.17
USP38-202ENST00000510377 CPXCR1Q8N123 301 aa16.12■□□□□ 0.17
USP38-202ENST00000510377 PNMA5Q96PV4 448 aa16.12■□□□□ 0.17
USP38-202ENST00000510377 ISCUQ9H1K1 167 aa16.12■□□□□ 0.17
USP38-202ENST00000510377 CD209Q9NNX6 404 aa16.12■□□□□ 0.17
USP38-202ENST00000510377 BLOC1S4Q9NUP1 217 aa16.12■□□□□ 0.17
USP38-202ENST00000510377 ABCC6O95255 1503 aa16.12■□□□□ 0.17
USP38-202ENST00000510377 NMT1P30419 496 aaKnown RBP16.11■□□□□ 0.17
USP38-202ENST00000510377 CERKLQ49MI3 558 aaPredicted RBP16.11■□□□□ 0.17
USP38-202ENST00000510377 CNOT10Q9H9A5 744 aaKnown RBP16.11■□□□□ 0.17
USP38-202ENST00000510377 HOMER2Q9NSB8 354 aa16.11■□□□□ 0.17
USP38-202ENST00000510377 KLHL14Q9P2G3 628 aa16.11■□□□□ 0.17
USP38-202ENST00000510377 IFNB1P01574 187 aa16.11■□□□□ 0.17
USP38-202ENST00000510377 ZNF131P52739 623 aa16.11■□□□□ 0.17
USP38-202ENST00000510377 SF3B3Q15393 1217 aaKnown RBP16.11■□□□□ 0.17
USP38-202ENST00000510377 LRCH2Q5VUJ6 765 aa16.11■□□□□ 0.17
USP38-202ENST00000510377 FAM47EQ6ZV65 393 aa16.11■□□□□ 0.17
USP38-202ENST00000510377 C4orf32Q8N8J7 132 aa16.11■□□□□ 0.17
USP38-202ENST00000510377 ZNF653Q96CK0 615 aa16.11■□□□□ 0.17
USP38-202ENST00000510377 AMNQ9BXJ7 453 aa16.11■□□□□ 0.17
USP38-202ENST00000510377 PPP1R12CQ9BZL4 782 aa16.11■□□□□ 0.17
USP38-202ENST00000510377 PARP2Q9UGN5 583 aa16.11■□□□□ 0.17
USP38-202ENST00000510377 SETD1AO15047 1707 aaKnown RBP16.11■□□□□ 0.17
USP38-202ENST00000510377 GOLGA8IPA6NC78 632 aa16.11■□□□□ 0.17
USP38-202ENST00000510377 GOLGA8JA6NMD2 632 aa16.11■□□□□ 0.17
USP38-202ENST00000510377 NKRFO15226 690 aaKnown RBP eCLIP16.11■□□□□ 0.17
USP38-202ENST00000510377 CHN1P15882 459 aa16.11■□□□□ 0.17
USP38-202ENST00000510377 USP11P51784 963 aa16.11■□□□□ 0.17
USP38-202ENST00000510377 SESN3P58005 492 aa16.11■□□□□ 0.17
USP38-202ENST00000510377 CAVIN3Q969G5 261 aa16.11■□□□□ 0.17
USP38-202ENST00000510377 NAGPAQ9UK23 515 aa16.11■□□□□ 0.17
USP38-202ENST00000510377 PASKQ96RG2 1323 aa16.11■□□□□ 0.17
USP38-202ENST00000510377 H0YIN7 160 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms