RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 STXBP4Q6ZWJ1 553 aa12.01□□□□□ -0.49
SEC31A-228ENST00000509142 HS2ST1Q7LGA3 356 aa12.01□□□□□ -0.49
SEC31A-228ENST00000509142 FBXO28Q9NVF7 368 aa12.01□□□□□ -0.49
SEC31A-228ENST00000509142 PRELPP51888 382 aa12□□□□□ -0.49
SEC31A-228ENST00000509142 GBP6Q6ZN66 633 aa12□□□□□ -0.49
SEC31A-228ENST00000509142 OTOP1Q7RTM1 612 aa12□□□□□ -0.49
SEC31A-228ENST00000509142 FAM160B2Q86V87 743 aa12□□□□□ -0.49
SEC31A-228ENST00000509142 RNF10Q8N5U6 811 aaKnown RBP12□□□□□ -0.49
SEC31A-228ENST00000509142 WDR18Q9BV38 432 aa12□□□□□ -0.49
SEC31A-228ENST00000509142 TUFT1Q9NNX1 390 aa12□□□□□ -0.49
SEC31A-228ENST00000509142 RBM12Q9NTZ6 932 aaKnown RBP12□□□□□ -0.49
SEC31A-228ENST00000509142 CTDP1Q9Y5B0 961 aaPredicted RBP12□□□□□ -0.49
SEC31A-228ENST00000509142 GREB1LQ9C091 1923 aaPredicted RBP12□□□□□ -0.49
SEC31A-228ENST00000509142 LDHDQ86WU2 507 aa12□□□□□ -0.49
SEC31A-228ENST00000509142 AFAP1L1Q8TED9 768 aa12□□□□□ -0.49
SEC31A-228ENST00000509142 PARVGQ9HBI0 331 aa12□□□□□ -0.49
SEC31A-228ENST00000509142 ARFGEF1Q9Y6D6 1849 aa12□□□□□ -0.49
SEC31A-228ENST00000509142 AKAP3O75969 853 aa12□□□□□ -0.49
SEC31A-228ENST00000509142 NMT1P30419 496 aaKnown RBP12□□□□□ -0.49
SEC31A-228ENST00000509142 SLC20A2Q08357 652 aa12□□□□□ -0.49
SEC31A-228ENST00000509142 TRADDQ15628 312 aa12□□□□□ -0.49
SEC31A-228ENST00000509142 SLC18A3Q16572 532 aa12□□□□□ -0.49
SEC31A-228ENST00000509142 NIM1KQ8IY84 436 aa12□□□□□ -0.49
SEC31A-228ENST00000509142 CCDC43Q96MW1 224 aaKnown RBP12□□□□□ -0.49
SEC31A-228ENST00000509142 NACC1Q96RE7 527 aa12□□□□□ -0.49
SEC31A-228ENST00000509142 TEKT3Q9BXF9 490 aa12□□□□□ -0.49
SEC31A-228ENST00000509142 WDR11Q9BZH6 1224 aa12□□□□□ -0.49
SEC31A-228ENST00000509142 IGLV3-22A0A075B6J6 115 aa11.99□□□□□ -0.49
SEC31A-228ENST00000509142 PJA2O43164 708 aa11.99□□□□□ -0.49
SEC31A-228ENST00000509142 SLITRK3O94933 977 aa11.99□□□□□ -0.49
SEC31A-228ENST00000509142 NOP2P46087 812 aaKnown RBP11.99□□□□□ -0.49
SEC31A-228ENST00000509142 CASP4P49662 377 aa11.99□□□□□ -0.49
SEC31A-228ENST00000509142 TNIP1Q15025 636 aa11.99□□□□□ -0.49
SEC31A-228ENST00000509142 LEKR1Q6ZMV7 388 aa11.99□□□□□ -0.49
SEC31A-228ENST00000509142 VPS36Q86VN1 386 aa11.99□□□□□ -0.49
SEC31A-228ENST00000509142 DNAAF5Q86Y56 855 aa11.99□□□□□ -0.49
SEC31A-228ENST00000509142 FAM178BQ8IXR5 827 aa11.99□□□□□ -0.49
SEC31A-228ENST00000509142 SYCP3Q8IZU3 236 aa11.99□□□□□ -0.49
SEC31A-228ENST00000509142 CPXCR1Q8N123 301 aa11.99□□□□□ -0.49
SEC31A-228ENST00000509142 GOLGA6L1Q8N7Z2 621 aa11.99□□□□□ -0.49
SEC31A-228ENST00000509142 CCPG1Q9ULG6 757 aa11.99□□□□□ -0.49
SEC31A-228ENST00000509142 SAMM50Q9Y512 469 aa11.99□□□□□ -0.49
SEC31A-228ENST00000509142 ARHGEF35A5YM69 484 aa11.99□□□□□ -0.49
SEC31A-228ENST00000509142 ZBTB39O15060 712 aa11.99□□□□□ -0.49
SEC31A-228ENST00000509142 VIL1P09327 827 aaKnown RBP11.99□□□□□ -0.49
SEC31A-228ENST00000509142 PRLRP16471 622 aa11.99□□□□□ -0.49
SEC31A-228ENST00000509142 KCNA1Q09470 495 aa11.99□□□□□ -0.49
SEC31A-228ENST00000509142 PLS1Q14651 629 aa11.99□□□□□ -0.49
SEC31A-228ENST00000509142 SKIDA1Q1XH10 827 aa11.99□□□□□ -0.49
SEC31A-228ENST00000509142 SPDYE2Q495Y8 402 aa11.99□□□□□ -0.49
SEC31A-228ENST00000509142 GRIPAP1Q4V328 841 aa11.99□□□□□ -0.49
SEC31A-228ENST00000509142 SND1Q7KZF4 910 aaKnown RBP eCLIP11.99□□□□□ -0.491e-8■□□□□ 9.2
SEC31A-228ENST00000509142 HSD17B14Q9BPX1 270 aa11.99□□□□□ -0.49
SEC31A-228ENST00000509142 BCAS3Q9H6U6 928 aa11.99□□□□□ -0.49
SEC31A-228ENST00000509142 TSKSQ9UJT2 592 aa11.99□□□□□ -0.49
SEC31A-228ENST00000509142 FEM1BQ9UK73 627 aa11.99□□□□□ -0.49
SEC31A-228ENST00000509142 A0A087X0T9 212 aa11.99□□□□□ -0.49
SEC31A-228ENST00000509142 FAM228BP0C875 321 aa11.99□□□□□ -0.49
SEC31A-228ENST00000509142 UCHL3P15374 230 aa11.99□□□□□ -0.49
SEC31A-228ENST00000509142 ODR4Q5SWX8 454 aa11.99□□□□□ -0.49
SEC31A-228ENST00000509142 CDAN1Q8IWY9 1227 aa11.99□□□□□ -0.49
SEC31A-228ENST00000509142 KCTD17Q8N5Z5 321 aa11.99□□□□□ -0.49
SEC31A-228ENST00000509142 PACSIN1Q9BY11 444 aa11.99□□□□□ -0.49
SEC31A-228ENST00000509142 SHTN1A0MZ66 631 aa11.98□□□□□ -0.49
SEC31A-228ENST00000509142 SHOX2O60902 331 aaPredicted RBP11.98□□□□□ -0.49
SEC31A-228ENST00000509142 PALMO75781 387 aa11.98□□□□□ -0.49
SEC31A-228ENST00000509142 PSMD10O75832 226 aa11.98□□□□□ -0.49
SEC31A-228ENST00000509142 GLI1P08151 1106 aa11.98□□□□□ -0.49
SEC31A-228ENST00000509142 ASNSP08243 561 aa11.98□□□□□ -0.49
SEC31A-228ENST00000509142 FAM153BP0C7A2 387 aa11.98□□□□□ -0.49
SEC31A-228ENST00000509142 CAP2P40123 477 aa11.98□□□□□ -0.49
SEC31A-228ENST00000509142 FAM153CQ494X1 144 aa11.98□□□□□ -0.49
SEC31A-228ENST00000509142 ZC2HC1CQ53FD0 456 aaPredicted RBP11.98□□□□□ -0.49
SEC31A-228ENST00000509142 DPY19L2P1Q6NXN4 242 aa11.98□□□□□ -0.49
SEC31A-228ENST00000509142 MAEAQ7L5Y9 396 aa11.98□□□□□ -0.49
SEC31A-228ENST00000509142 EPM2AIP1Q7L775 607 aaPredicted RBP11.98□□□□□ -0.49
SEC31A-228ENST00000509142 TRMT1LQ7Z2T5 733 aaKnown RBP11.98□□□□□ -0.49
SEC31A-228ENST00000509142 FAM186BQ8IYM0 893 aa11.98□□□□□ -0.49
SEC31A-228ENST00000509142 TAF4BQ92750 862 aa11.98□□□□□ -0.49
SEC31A-228ENST00000509142 ARL8AQ96BM9 186 aa11.98□□□□□ -0.49
SEC31A-228ENST00000509142 RANBP17Q9H2T7 1088 aaKnown RBP11.98□□□□□ -0.49
SEC31A-228ENST00000509142 AIPL1Q9NZN9 384 aa11.98□□□□□ -0.49
SEC31A-228ENST00000509142 GCNT4Q9P109 453 aa11.98□□□□□ -0.49
SEC31A-228ENST00000509142 FAM153AQ9UHL3 310 aa11.98□□□□□ -0.49
SEC31A-228ENST00000509142 RSPH14Q9UHP6 348 aa11.98□□□□□ -0.49
SEC31A-228ENST00000509142 PACSIN2Q9UNF0 486 aaPredicted RBP11.98□□□□□ -0.49
SEC31A-228ENST00000509142 GRIN2DO15399 1336 aa11.98□□□□□ -0.49
SEC31A-228ENST00000509142 IPO5O00410 1097 aaKnown RBP11.98□□□□□ -0.49
SEC31A-228ENST00000509142 FTCDO95954 541 aa11.98□□□□□ -0.49
SEC31A-228ENST00000509142 ARP10275 920 aa11.98□□□□□ -0.49
SEC31A-228ENST00000509142 PSMC2P35998 433 aaKnown RBP11.98□□□□□ -0.49
SEC31A-228ENST00000509142 CYP2J2P51589 502 aa11.98□□□□□ -0.49
SEC31A-228ENST00000509142 CFAP221Q4G0U5 840 aa11.98□□□□□ -0.49
SEC31A-228ENST00000509142 TTMPQ5BVD1 217 aa11.98□□□□□ -0.49
SEC31A-228ENST00000509142 BBXQ8WY36 941 aaPredicted RBP11.98□□□□□ -0.49
SEC31A-228ENST00000509142 SH3GL2Q99962 352 aa11.98□□□□□ -0.49
SEC31A-228ENST00000509142 ZNF341Q9BYN7 854 aa11.98□□□□□ -0.49
SEC31A-228ENST00000509142 GANQ9H2C0 597 aa11.98□□□□□ -0.49
SEC31A-228ENST00000509142 RABEP2Q9H5N1 569 aa11.98□□□□□ -0.49
SEC31A-228ENST00000509142 TCEAL9Q9UHQ7 104 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms