RNA–Protein interactions for RNA: ENST00000508550.5

CCSER1-207, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 716 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-207ENST00000508550 RDM1Q8NG50 284 aa9.04□□□□□ -0.96
CCSER1-207ENST00000508550 CLEC4DQ8WXI8 215 aa9.04□□□□□ -0.96
CCSER1-207ENST00000508550 LENG9Q96B70 501 aa9.04□□□□□ -0.96
CCSER1-207ENST00000508550 ABHD17AQ96GS6 310 aa9.04□□□□□ -0.96
CCSER1-207ENST00000508550 CDHR1Q96JP9 859 aa9.04□□□□□ -0.96
CCSER1-207ENST00000508550 IWS1Q96ST2 819 aa9.04□□□□□ -0.96
CCSER1-207ENST00000508550 TEX13BQ9BXU2 312 aa9.04□□□□□ -0.96
CCSER1-207ENST00000508550 DNAJC25Q9H1X3 360 aa9.04□□□□□ -0.96
CCSER1-207ENST00000508550 TTC12Q9H892 705 aaPredicted RBP9.04□□□□□ -0.96
CCSER1-207ENST00000508550 CCPG1Q9ULG6 757 aa9.04□□□□□ -0.96
CCSER1-207ENST00000508550 SNCAIPQ9Y6H5 919 aa9.04□□□□□ -0.96
CCSER1-207ENST00000508550 ASTN2O75129 1339 aaPredicted RBP9.04□□□□□ -0.96
CCSER1-207ENST00000508550 TCHHQ07283 1943 aa9.03□□□□□ -0.96
CCSER1-207ENST00000508550 MYH15Q9Y2K3 1946 aa9.03□□□□□ -0.96
CCSER1-207ENST00000508550 IGLV3-22A0A075B6J6 115 aa9.03□□□□□ -0.96
CCSER1-207ENST00000508550 LRRC10BA6NIK2 292 aa9.03□□□□□ -0.96
CCSER1-207ENST00000508550 TMEM229AB2RXF0 380 aa9.03□□□□□ -0.96
CCSER1-207ENST00000508550 B4DLN1 442 aa9.03□□□□□ -0.96
CCSER1-207ENST00000508550 SLC37A4O43826 429 aa9.03□□□□□ -0.96
CCSER1-207ENST00000508550 MARCH6O60337 910 aa9.03□□□□□ -0.96
CCSER1-207ENST00000508550 KIF20AO95235 890 aa9.03□□□□□ -0.96
CCSER1-207ENST00000508550 SLC25A27O95847 323 aa9.03□□□□□ -0.96
CCSER1-207ENST00000508550 BMP4P12644 408 aa9.03□□□□□ -0.96
CCSER1-207ENST00000508550 HOXB4P17483 251 aaPredicted RBP9.03□□□□□ -0.96
CCSER1-207ENST00000508550 FGFR3P22607 806 aa9.03□□□□□ -0.96
CCSER1-207ENST00000508550 TECP42680 631 aa9.03□□□□□ -0.96
CCSER1-207ENST00000508550 PPP2R5CQ13362 524 aa9.03□□□□□ -0.96
CCSER1-207ENST00000508550 VGLL4Q14135 290 aa9.03□□□□□ -0.96
CCSER1-207ENST00000508550 UBE2SQ16763 222 aa9.03□□□□□ -0.96
CCSER1-207ENST00000508550 ZNF658Q5TYW1 1059 aaPredicted RBP9.03□□□□□ -0.96
CCSER1-207ENST00000508550 B3GNT9Q6UX72 402 aa9.03□□□□□ -0.96
CCSER1-207ENST00000508550 USP49Q70CQ1 688 aa9.03□□□□□ -0.96
CCSER1-207ENST00000508550 SV2BQ7L1I2 683 aa9.03□□□□□ -0.96
CCSER1-207ENST00000508550 PLA2G4DQ86XP0 818 aa9.03□□□□□ -0.96
CCSER1-207ENST00000508550 DHX40Q8IX18 779 aaKnown RBP9.03□□□□□ -0.96
CCSER1-207ENST00000508550 ZKSCAN4Q969J2 545 aaPredicted RBP9.03□□□□□ -0.96
CCSER1-207ENST00000508550 DHX58Q96C10 678 aa9.03□□□□□ -0.96
CCSER1-207ENST00000508550 TRIM44Q96DX7 344 aaPredicted RBP9.03□□□□□ -0.96
CCSER1-207ENST00000508550 CTAGE1Q96RT6 745 aa9.03□□□□□ -0.96
CCSER1-207ENST00000508550 GLIS2Q9BZE0 524 aaPredicted RBP9.03□□□□□ -0.96
CCSER1-207ENST00000508550 TANGO6Q9C0B7 1094 aa9.03□□□□□ -0.96
CCSER1-207ENST00000508550 ZCCHC2Q9C0B9 1178 aaKnown RBP9.03□□□□□ -0.96
CCSER1-207ENST00000508550 TUFT1Q9NNX1 390 aa9.03□□□□□ -0.96
CCSER1-207ENST00000508550 TBC1D22BQ9NU19 505 aa9.03□□□□□ -0.96
CCSER1-207ENST00000508550 TMEM260Q9NX78 707 aa9.03□□□□□ -0.96
CCSER1-207ENST00000508550 MAN1B1Q9UKM7 699 aa9.03□□□□□ -0.96
CCSER1-207ENST00000508550 PCDHGC4Q9Y5F7 938 aa9.03□□□□□ -0.96
CCSER1-207ENST00000508550 PCDHGA11Q9Y5H2 935 aa9.03□□□□□ -0.96
CCSER1-207ENST00000508550 SSC5DA1L4H1 1573 aa9.03□□□□□ -0.96
CCSER1-207ENST00000508550 A0A087X0B3 334 aa9.02□□□□□ -0.97
CCSER1-207ENST00000508550 CBFA2T2O43439 604 aa9.02□□□□□ -0.97
CCSER1-207ENST00000508550 TDP2O95551 362 aa9.02□□□□□ -0.97
CCSER1-207ENST00000508550 CFBP00751 764 aa9.02□□□□□ -0.97
CCSER1-207ENST00000508550 TXKP42681 527 aa9.02□□□□□ -0.97
CCSER1-207ENST00000508550 PLA2G4AP47712 749 aa9.02□□□□□ -0.97
CCSER1-207ENST00000508550 SPAG1Q07617 926 aa9.02□□□□□ -0.97
CCSER1-207ENST00000508550 SPIRE1Q08AE8 756 aa9.02□□□□□ -0.97
CCSER1-207ENST00000508550 PNOCQ13519 176 aa9.02□□□□□ -0.97
CCSER1-207ENST00000508550 STIM1Q13586 685 aa9.02□□□□□ -0.97
CCSER1-207ENST00000508550 USH1GQ495M9 461 aa9.02□□□□□ -0.97
CCSER1-207ENST00000508550 SPECC1Q5M775 1068 aa9.02□□□□□ -0.97
CCSER1-207ENST00000508550 SLCO4C1Q6ZQN7 724 aa9.02□□□□□ -0.97
CCSER1-207ENST00000508550 ALYREFQ86V81 257 aaKnown RBP9.02□□□□□ -0.97
CCSER1-207ENST00000508550 RNF214Q8ND24 703 aa9.02□□□□□ -0.97
CCSER1-207ENST00000508550 NOC3LQ8WTT2 800 aaKnown RBP9.02□□□□□ -0.97
CCSER1-207ENST00000508550 LARP4BQ92615 738 aaKnown RBP9.02□□□□□ -0.97
CCSER1-207ENST00000508550 SLC5A5Q92911 643 aa9.02□□□□□ -0.97
CCSER1-207ENST00000508550 CDCA5Q96FF9 252 aa9.02□□□□□ -0.97
CCSER1-207ENST00000508550 DHTKD1Q96HY7 919 aaPredicted RBP9.02□□□□□ -0.97
CCSER1-207ENST00000508550 CDK5RAP3Q96JB5 506 aa9.02□□□□□ -0.97
CCSER1-207ENST00000508550 SPOCK3Q9BQ16 436 aa9.02□□□□□ -0.97
CCSER1-207ENST00000508550 MXRA8Q9BRK3 442 aa9.02□□□□□ -0.97
CCSER1-207ENST00000508550 MMTAG2Q9BU76 263 aaKnown RBP9.02□□□□□ -0.97
CCSER1-207ENST00000508550 TRIM9Q9C026 710 aa9.02□□□□□ -0.97
CCSER1-207ENST00000508550 IMPACTQ9P2X3 320 aa9.02□□□□□ -0.97
CCSER1-207ENST00000508550 RWDD2AQ9UIY3 292 aa9.02□□□□□ -0.97
CCSER1-207ENST00000508550 ZNF214Q9UL59 606 aaPredicted RBP9.02□□□□□ -0.97
CCSER1-207ENST00000508550 MKL2Q9ULH7 1088 aa9.02□□□□□ -0.97
CCSER1-207ENST00000508550 PFASO15067 1338 aa9.02□□□□□ -0.97
CCSER1-207ENST00000508550 MYH8P13535 1937 aa9.01□□□□□ -0.97
CCSER1-207ENST00000508550 FAM86B1E9PN63 330 aa9.01□□□□□ -0.97
CCSER1-207ENST00000508550 LZTS3O60299 673 aaPredicted RBP9.01□□□□□ -0.97
CCSER1-207ENST00000508550 DKC1O60832 514 aaKnown RBP eCLIP9.01□□□□□ -0.97
CCSER1-207ENST00000508550 PSMD10O75832 226 aa9.01□□□□□ -0.97
CCSER1-207ENST00000508550 LYPLA2O95372 231 aa9.01□□□□□ -0.97
CCSER1-207ENST00000508550 ADCY5O95622 1261 aa9.01□□□□□ -0.97
CCSER1-207ENST00000508550 RPN1P04843 607 aaKnown RBP9.01□□□□□ -0.97
CCSER1-207ENST00000508550 FAM86B2P0C5J1 330 aa9.01□□□□□ -0.97
CCSER1-207ENST00000508550 ARAFP10398 606 aa9.01□□□□□ -0.97
CCSER1-207ENST00000508550 SCP2P22307 547 aa9.01□□□□□ -0.97
CCSER1-207ENST00000508550 ZNF76P36508 570 aa9.01□□□□□ -0.97
CCSER1-207ENST00000508550 STAT3P40763 770 aa9.01□□□□□ -0.97
CCSER1-207ENST00000508550 HMGCS2P54868 508 aa9.01□□□□□ -0.97
CCSER1-207ENST00000508550 NCAPHQ15003 741 aa9.01□□□□□ -0.97
CCSER1-207ENST00000508550 KARSQ15046 597 aaKnown RBP9.01□□□□□ -0.97
CCSER1-207ENST00000508550 EPHA7Q15375 998 aa9.01□□□□□ -0.97
CCSER1-207ENST00000508550 DPCR1Q3MIW9 517 aa9.01□□□□□ -0.97
CCSER1-207ENST00000508550 SPATA1Q5VX52 437 aa9.01□□□□□ -0.97
CCSER1-207ENST00000508550 LINC00114Q6XXX2 140 aa9.01□□□□□ -0.97
CCSER1-207ENST00000508550 UNC13DQ70J99 1090 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 240.6 ms