RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 RNF208Q9H0X6 261 aa9.66□□□□□ -0.86
USP46-207ENST00000508499 TUT1Q9H6E5 874 aaKnown RBP9.66□□□□□ -0.86
USP46-207ENST00000508499 PKD2L1Q9P0L9 805 aa9.66□□□□□ -0.86
USP46-207ENST00000508499 PHF24Q9UPV7 400 aa9.66□□□□□ -0.86
USP46-207ENST00000508499 SAMM50Q9Y512 469 aa9.66□□□□□ -0.86
USP46-207ENST00000508499 PP2D1A8MPX8 630 aa9.65□□□□□ -0.86
USP46-207ENST00000508499 CHMP2AO43633 222 aa9.65□□□□□ -0.86
USP46-207ENST00000508499 HBP1O60381 514 aa9.65□□□□□ -0.86
USP46-207ENST00000508499 EYA4O95677 639 aa9.65□□□□□ -0.86
USP46-207ENST00000508499 OATP04181 439 aa9.65□□□□□ -0.86
USP46-207ENST00000508499 SLFN14P0C7P3 912 aa9.65□□□□□ -0.86
USP46-207ENST00000508499 ATP4AP20648 1035 aa9.65□□□□□ -0.86
USP46-207ENST00000508499 CDC25AP30304 524 aa9.65□□□□□ -0.86
USP46-207ENST00000508499 MTFR1Q15390 333 aa9.65□□□□□ -0.86
USP46-207ENST00000508499 TARBP2Q15633 366 aaKnown RBP9.65□□□□□ -0.86
USP46-207ENST00000508499 ECM1Q16610 540 aa9.65□□□□□ -0.86
USP46-207ENST00000508499 GNASQ5JWF2 1037 aa9.65□□□□□ -0.86
USP46-207ENST00000508499 C1orf53Q5VUE5 145 aa9.65□□□□□ -0.86
USP46-207ENST00000508499 KANK3Q6NY19 840 aa9.65□□□□□ -0.86
USP46-207ENST00000508499 OTUD6AQ7L8S5 288 aa9.65□□□□□ -0.86
USP46-207ENST00000508499 SLC43A3Q8NBI5 491 aa9.65□□□□□ -0.86
USP46-207ENST00000508499 KAT2BQ92831 832 aa9.65□□□□□ -0.86
USP46-207ENST00000508499 DYDC2Q96IM9 177 aa9.65□□□□□ -0.86
USP46-207ENST00000508499 CEP89Q96ST8 783 aa9.65□□□□□ -0.86
USP46-207ENST00000508499 MTG1Q9BT17 334 aaPredicted RBP9.65□□□□□ -0.86
USP46-207ENST00000508499 TIPINQ9BVW5 301 aa9.65□□□□□ -0.86
USP46-207ENST00000508499 TNMDQ9H2S6 317 aa9.65□□□□□ -0.86
USP46-207ENST00000508499 BLOC1S4Q9NUP1 217 aa9.65□□□□□ -0.86
USP46-207ENST00000508499 KBTBD4Q9NVX7 518 aa9.65□□□□□ -0.86
USP46-207ENST00000508499 RGL1Q9NZL6 768 aa9.65□□□□□ -0.86
USP46-207ENST00000508499 WRAP73Q9P2S5 460 aaPredicted RBP9.65□□□□□ -0.86
USP46-207ENST00000508499 GABBR1Q9UBS5 961 aa9.65□□□□□ -0.86
USP46-207ENST00000508499 TELO2Q9Y4R8 837 aa9.65□□□□□ -0.86
USP46-207ENST00000508499 EVPLQ92817 2033 aa9.65□□□□□ -0.86
USP46-207ENST00000508499 TRIP12Q14669 1992 aaPredicted RBP9.65□□□□□ -0.87
USP46-207ENST00000508499 A0A087X0B3 334 aa9.65□□□□□ -0.87
USP46-207ENST00000508499 GAS2O43903 313 aaKnown RBP9.65□□□□□ -0.87
USP46-207ENST00000508499 GADD45BO75293 160 aaPredicted RBP9.65□□□□□ -0.87
USP46-207ENST00000508499 ZNF202O95125 648 aa9.65□□□□□ -0.87
USP46-207ENST00000508499 PGK1P00558 417 aa9.65□□□□□ -0.87
USP46-207ENST00000508499 RPLP2P05387 115 aaKnown RBP9.65□□□□□ -0.87
USP46-207ENST00000508499 ASGR1P07306 291 aa9.65□□□□□ -0.87
USP46-207ENST00000508499 PLCG1P19174 1290 aa9.65□□□□□ -0.87
USP46-207ENST00000508499 YWHABP31946 246 aaKnown RBP9.65□□□□□ -0.87
USP46-207ENST00000508499 SYKP43405 635 aa9.65□□□□□ -0.87
USP46-207ENST00000508499 RARRES1P49788 294 aa9.65□□□□□ -0.87
USP46-207ENST00000508499 NDUFA8P51970 172 aa9.65□□□□□ -0.87
USP46-207ENST00000508499 ACLYP53396 1101 aa9.65□□□□□ -0.87
USP46-207ENST00000508499 ADAM17P78536 824 aa9.65□□□□□ -0.87
USP46-207ENST00000508499 PRKCEQ02156 737 aa9.65□□□□□ -0.87
USP46-207ENST00000508499 KARSQ15046 597 aaKnown RBP9.65□□□□□ -0.87
USP46-207ENST00000508499 KCNA10Q16322 511 aa9.65□□□□□ -0.87
USP46-207ENST00000508499 UGCGQ16739 394 aa9.65□□□□□ -0.87
USP46-207ENST00000508499 SPECC1Q5M775 1068 aa9.65□□□□□ -0.87
USP46-207ENST00000508499 RRAGBQ5VZM2 374 aa9.65□□□□□ -0.87
USP46-207ENST00000508499 PDXDC2PQ6P474 469 aa9.65□□□□□ -0.87
USP46-207ENST00000508499 NFRKBQ6P4R8 1299 aa9.65□□□□□ -0.87
USP46-207ENST00000508499 ANO5Q75V66 913 aa9.65□□□□□ -0.87
USP46-207ENST00000508499 SYT2Q8N9I0 419 aaPredicted RBP9.65□□□□□ -0.87
USP46-207ENST00000508499 FSIP1Q8NA03 581 aa9.65□□□□□ -0.87
USP46-207ENST00000508499 BANK1Q8NDB2 785 aa9.65□□□□□ -0.87
USP46-207ENST00000508499 U2AF1L4Q8WU68 220 aaKnown RBP9.65□□□□□ -0.87
USP46-207ENST00000508499 LARP4BQ92615 738 aaKnown RBP9.65□□□□□ -0.87
USP46-207ENST00000508499 KCNN1Q92952 543 aa9.65□□□□□ -0.87
USP46-207ENST00000508499 LENG1Q96BZ8 264 aaPredicted RBP9.65□□□□□ -0.87
USP46-207ENST00000508499 CCDC34Q96HJ3 373 aa9.65□□□□□ -0.87
USP46-207ENST00000508499 CDK5RAP3Q96JB5 506 aa9.65□□□□□ -0.87
USP46-207ENST00000508499 DEFB118Q96PH6 123 aa9.65□□□□□ -0.87
USP46-207ENST00000508499 LRRC27Q9C0I9 530 aa9.65□□□□□ -0.87
USP46-207ENST00000508499 GOLPH3LQ9H4A5 285 aa9.65□□□□□ -0.87
USP46-207ENST00000508499 PDLIM7Q9NR12 457 aa9.65□□□□□ -0.87
USP46-207ENST00000508499 NRBP2Q9NSY0 501 aa9.65□□□□□ -0.87
USP46-207ENST00000508499 DDX19AQ9NUU7 478 aaKnown RBP9.65□□□□□ -0.87
USP46-207ENST00000508499 KIAA1024Q9UPX6 916 aa9.65□□□□□ -0.87
USP46-207ENST00000508499 DNM3Q9UQ16 869 aa9.65□□□□□ -0.87
USP46-207ENST00000508499 NRCAMQ92823 1304 aa9.64□□□□□ -0.87
USP46-207ENST00000508499 BRCA2P51587 3418 aa9.64□□□□□ -0.87
USP46-207ENST00000508499 SIP14410 1827 aa9.64□□□□□ -0.87
USP46-207ENST00000508499 IGKV6-21A0A0C4DH24 114 aa9.64□□□□□ -0.87
USP46-207ENST00000508499 A0A1B0GVL5 298 aa9.64□□□□□ -0.87
USP46-207ENST00000508499 MBLAC1A4D2B0 266 aaPredicted RBP9.64□□□□□ -0.87
USP46-207ENST00000508499 MYADML2A6NDP7 307 aa9.64□□□□□ -0.87
USP46-207ENST00000508499 RRN3P2A6NIE6 340 aa9.64□□□□□ -0.87
USP46-207ENST00000508499 ZBTB42B2RXF5 422 aa9.64□□□□□ -0.87
USP46-207ENST00000508499 BACH1O14867 736 aa9.64□□□□□ -0.87
USP46-207ENST00000508499 POLR2DO15514 142 aaKnown RBP9.64□□□□□ -0.87
USP46-207ENST00000508499 ACTN4O43707 911 aaKnown RBP9.64□□□□□ -0.87
USP46-207ENST00000508499 DGAT1O75907 488 aa9.64□□□□□ -0.87
USP46-207ENST00000508499 COL6A1P12109 1028 aa9.64□□□□□ -0.87
USP46-207ENST00000508499 SLC12A3P55017 1021 aa9.64□□□□□ -0.87
USP46-207ENST00000508499 CYP4A11Q02928 519 aa9.64□□□□□ -0.87
USP46-207ENST00000508499 CTTNQ14247 550 aaKnown RBP9.64□□□□□ -0.87
USP46-207ENST00000508499 SNX17Q15036 470 aa9.64□□□□□ -0.87
USP46-207ENST00000508499 PLCB4Q15147 1175 aa9.64□□□□□ -0.87
USP46-207ENST00000508499 SKOR2Q2VWA4 1001 aaPredicted RBP9.64□□□□□ -0.87
USP46-207ENST00000508499 ZNF484Q5JVG2 852 aa9.64□□□□□ -0.87
USP46-207ENST00000508499 SH3RF1Q7Z6J0 888 aa9.64□□□□□ -0.87
USP46-207ENST00000508499 TPH2Q8IWU9 490 aa9.64□□□□□ -0.87
USP46-207ENST00000508499 LRRC15Q8TF66 581 aa9.64□□□□□ -0.87
USP46-207ENST00000508499 RAD54LQ92698 747 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms