RNA–Protein interactions for RNA: ENST00000508006.1

SNCB-204, Transcript of synuclein beta, humanhuman

TSL 2

Gene SNCB, Length 969 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-204ENST00000508006 RABGGTBP53611 331 aa25.07■■□□□ 1.6
SNCB-204ENST00000508006 DNM1Q05193 864 aaKnown RBP25.07■■□□□ 1.6
SNCB-204ENST00000508006 STK38Q15208 465 aa25.07■■□□□ 1.6
SNCB-204ENST00000508006 KIAA0753Q2KHM9 967 aa25.07■■□□□ 1.6
SNCB-204ENST00000508006 PPP2R2DQ66LE6 453 aa25.07■■□□□ 1.6
SNCB-204ENST00000508006 SESTD1Q86VW0 696 aa25.07■■□□□ 1.6
SNCB-204ENST00000508006 KCNG4Q8TDN1 519 aa25.07■■□□□ 1.6
SNCB-204ENST00000508006 GABBR1Q9UBS5 961 aa25.07■■□□□ 1.6
SNCB-204ENST00000508006 YBX2Q9Y2T7 364 aaKnown RBP25.07■■□□□ 1.6
SNCB-204ENST00000508006 SRPRBQ9Y5M8 271 aaKnown RBP25.07■■□□□ 1.6
SNCB-204ENST00000508006 POTEMA6NI47 508 aa25.06■■□□□ 1.6
SNCB-204ENST00000508006 SPTLC2O15270 562 aa25.06■■□□□ 1.6
SNCB-204ENST00000508006 QARSP47897 775 aaKnown RBP25.06■■□□□ 1.6
SNCB-204ENST00000508006 PSMC5P62195 406 aa25.06■■□□□ 1.6
SNCB-204ENST00000508006 CEBPZQ03701 1054 aaKnown RBP25.06■■□□□ 1.6
SNCB-204ENST00000508006 IL17AQ16552 155 aa25.06■■□□□ 1.6
SNCB-204ENST00000508006 HAUS3Q68CZ6 603 aa25.06■■□□□ 1.6
SNCB-204ENST00000508006 PDXDC2PQ6P474 469 aa25.06■■□□□ 1.6
SNCB-204ENST00000508006 SCLYQ96I15 445 aa25.06■■□□□ 1.6
SNCB-204ENST00000508006 FAM167AQ96KS9 214 aa25.06■■□□□ 1.6
SNCB-204ENST00000508006 HSD17B14Q9BPX1 270 aa25.06■■□□□ 1.6
SNCB-204ENST00000508006 POLR3CQ9BUI4 534 aaPredicted RBP25.06■■□□□ 1.6
SNCB-204ENST00000508006 SCAND2PQ9GZW5 306 aaPredicted RBP25.06■■□□□ 1.6
SNCB-204ENST00000508006 WNT8AQ9H1J5 351 aa25.06■■□□□ 1.6
SNCB-204ENST00000508006 TCHHQ07283 1943 aa25.06■■□□□ 1.6
SNCB-204ENST00000508006 GBF1Q92538 1859 aa25.05■■□□□ 1.6
SNCB-204ENST00000508006 VWA3AA6NCI4 1184 aa25.05■■□□□ 1.6
SNCB-204ENST00000508006 SLC26A4O43511 780 aa25.05■■□□□ 1.6
SNCB-204ENST00000508006 COL9A1P20849 921 aa25.05■■□□□ 1.6
SNCB-204ENST00000508006 NBPF20Q3BBV1 942 aa25.05■■□□□ 1.6
SNCB-204ENST00000508006 TRIM50Q86XT4 487 aa25.05■■□□□ 1.6
SNCB-204ENST00000508006 MICALL1Q8N3F8 863 aa25.05■■□□□ 1.6
SNCB-204ENST00000508006 ADAMTS19Q8TE59 1207 aa25.05■■□□□ 1.6
SNCB-204ENST00000508006 EIF2AK1Q9BQI3 630 aaKnown RBP25.05■■□□□ 1.6
SNCB-204ENST00000508006 TUFT1Q9NNX1 390 aa25.05■■□□□ 1.6
SNCB-204ENST00000508006 RCOR1Q9UKL0 485 aa25.05■■□□□ 1.6
SNCB-204ENST00000508006 CHD9Q3L8U1 2897 aa25.04■■□□□ 1.6
SNCB-204ENST00000508006 RPA1P27694 616 aa25.04■■□□□ 1.6
SNCB-204ENST00000508006 FOXD4L6Q3SYB3 417 aaPredicted RBP25.04■■□□□ 1.6
SNCB-204ENST00000508006 FOXD4L3Q6VB84 417 aaPredicted RBP25.04■■□□□ 1.6
SNCB-204ENST00000508006 C4orf19Q8IY42 314 aa25.04■■□□□ 1.6
SNCB-204ENST00000508006 KCTD17Q8N5Z5 321 aa25.04■■□□□ 1.6
SNCB-204ENST00000508006 C7orf31Q8N865 590 aa25.04■■□□□ 1.6
SNCB-204ENST00000508006 KRI1Q8N9T8 703 aaKnown RBP25.04■■□□□ 1.6
SNCB-204ENST00000508006 ATP8B4Q8TF62 1192 aa25.04■■□□□ 1.6
SNCB-204ENST00000508006 BBXQ8WY36 941 aaPredicted RBP25.04■■□□□ 1.6
SNCB-204ENST00000508006 ZSWIM4Q9H7M6 989 aa25.04■■□□□ 1.6
SNCB-204ENST00000508006 FBXO2Q9UK22 296 aaPredicted RBP25.04■■□□□ 1.6
SNCB-204ENST00000508006 PCDHA11Q9Y5I1 949 aa25.04■■□□□ 1.6
SNCB-204ENST00000508006 LOXHD1Q8IVV2 1947 aa25.04■■□□□ 1.6
SNCB-204ENST00000508006 HBP1O60381 514 aa25.03■■□□□ 1.6
SNCB-204ENST00000508006 SLITRK3O94933 977 aa25.03■■□□□ 1.6
SNCB-204ENST00000508006 LYPLA2O95372 231 aa25.03■■□□□ 1.6
SNCB-204ENST00000508006 ATP2A2P16615 1042 aaKnown RBP25.03■■□□□ 1.6
SNCB-204ENST00000508006 KRT79Q5XKE5 535 aa25.03■■□□□ 1.6
SNCB-204ENST00000508006 DEFB128Q7Z7B8 93 aa25.03■■□□□ 1.6
SNCB-204ENST00000508006 UHRF1Q96T88 793 aaPredicted RBP25.03■■□□□ 1.6
SNCB-204ENST00000508006 RNPEPQ9H4A4 650 aa25.03■■□□□ 1.6
SNCB-204ENST00000508006 NRBP2Q9NSY0 501 aa25.03■■□□□ 1.6
SNCB-204ENST00000508006 TRMT13Q9NUP7 481 aaKnown RBP25.03■■□□□ 1.6
SNCB-204ENST00000508006 NRCAMQ92823 1304 aa25.03■■□□□ 1.6
SNCB-204ENST00000508006 KAT6AQ92794 2004 aa25.03■■□□□ 1.6
SNCB-204ENST00000508006 POTEB3A0JP26 581 aa25.02■■□□□ 1.6
SNCB-204ENST00000508006 PFKMP08237 780 aa25.02■■□□□ 1.6
SNCB-204ENST00000508006 GNAT1P11488 350 aa25.02■■□□□ 1.6
SNCB-204ENST00000508006 CYP2C9P11712 490 aa25.02■■□□□ 1.6
SNCB-204ENST00000508006 MYOGP15173 224 aa25.02■■□□□ 1.6
SNCB-204ENST00000508006 MARCKSP29966 332 aaPredicted RBP25.02■■□□□ 1.6
SNCB-204ENST00000508006 HOXC8P31273 242 aa25.02■■□□□ 1.6
SNCB-204ENST00000508006 PLCB4Q15147 1175 aa25.02■■□□□ 1.6
SNCB-204ENST00000508006 XKR3Q5GH77 459 aa25.02■■□□□ 1.6
SNCB-204ENST00000508006 FAM47CQ5HY64 1035 aa25.02■■□□□ 1.6
SNCB-204ENST00000508006 POTEBQ6S5H4 581 aa25.02■■□□□ 1.6
SNCB-204ENST00000508006 CKAP2LQ8IYA6 745 aa25.02■■□□□ 1.6
SNCB-204ENST00000508006 ZNF579Q8NAF0 562 aaKnown RBP25.02■■□□□ 1.6
SNCB-204ENST00000508006 BANK1Q8NDB2 785 aa25.02■■□□□ 1.6
SNCB-204ENST00000508006 DYDC2Q96IM9 177 aa25.02■■□□□ 1.6
SNCB-204ENST00000508006 LXNQ9BS40 222 aa25.02■■□□□ 1.6
SNCB-204ENST00000508006 COL1A2P08123 1366 aa25.02■■□□□ 1.6
SNCB-204ENST00000508006 RRN3P2A6NIE6 340 aa25.01■■□□□ 1.59
SNCB-204ENST00000508006 OATP04181 439 aa25.01■■□□□ 1.59
SNCB-204ENST00000508006 ACTN1P12814 892 aa25.01■■□□□ 1.59
SNCB-204ENST00000508006 XRCC6P12956 609 aaKnown RBP eCLIP25.01■■□□□ 1.59
SNCB-204ENST00000508006 ATP4AP20648 1035 aa25.01■■□□□ 1.59
SNCB-204ENST00000508006 SKIV2LQ15477 1246 aaKnown RBP25.01■■□□□ 1.59
SNCB-204ENST00000508006 GTF2IRD1Q9UHL9 959 aa25.01■■□□□ 1.59
SNCB-204ENST00000508006 PPME1Q9Y570 386 aa25.01■■□□□ 1.59
SNCB-204ENST00000508006 ZNF862O60290 1169 aa25■■□□□ 1.59
SNCB-204ENST00000508006 CUTAO60888 179 aa25■■□□□ 1.59
SNCB-204ENST00000508006 SPATA31C1P0DKV0 1188 aa25■■□□□ 1.59
SNCB-204ENST00000508006 SMIM10L2AP0DMW4 78 aa25■■□□□ 1.59
SNCB-204ENST00000508006 SMIM10L2BP0DMW5 78 aa25■■□□□ 1.59
SNCB-204ENST00000508006 NCLP19338 710 aaKnown RBP25■■□□□ 1.59
SNCB-204ENST00000508006 MARK3P27448 753 aa25■■□□□ 1.59
SNCB-204ENST00000508006 PRKCEQ02156 737 aa25■■□□□ 1.59
SNCB-204ENST00000508006 UGCGQ16739 394 aa25■■□□□ 1.59
SNCB-204ENST00000508006 ZNF484Q5JVG2 852 aa25■■□□□ 1.59
SNCB-204ENST00000508006 CATSPER3Q86XQ3 398 aa25■■□□□ 1.59
SNCB-204ENST00000508006 SPATA32Q96LK8 384 aa25■■□□□ 1.59
SNCB-204ENST00000508006 NIFKQ9BYG3 293 aaKnown RBP25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms