RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 TMEM40Q8WWA1 233 aa18.82■□□□□ 0.6
SNF8-205ENST00000507302 RIPOR3Q96MK2 946 aa18.82■□□□□ 0.6
SNF8-205ENST00000507302 MXRA8Q9BRK3 442 aa18.82■□□□□ 0.6
SNF8-205ENST00000507302 AZI2Q9H6S1 392 aa18.82■□□□□ 0.6
SNF8-205ENST00000507302 ELAC1Q9H777 363 aaKnown RBP18.82■□□□□ 0.6
SNF8-205ENST00000507302 LRFN2Q9ULH4 789 aa18.82■□□□□ 0.6
SNF8-205ENST00000507302 PCDHA6Q9UN73 950 aa18.82■□□□□ 0.6
SNF8-205ENST00000507302 NOC2LQ9Y3T9 749 aaKnown RBP18.82■□□□□ 0.6
SNF8-205ENST00000507302 PCDHB7Q9Y5E2 793 aa18.82■□□□□ 0.6
SNF8-205ENST00000507302 PCDHA8Q9Y5H6 950 aa18.82■□□□□ 0.6
SNF8-205ENST00000507302 DCHS1Q96JQ0 3298 aa18.82■□□□□ 0.6
SNF8-205ENST00000507302 RIF1Q5UIP0 2472 aaKnown RBP18.82■□□□□ 0.6
SNF8-205ENST00000507302 MYO10Q9HD67 2058 aa18.81■□□□□ 0.6
SNF8-205ENST00000507302 PPFIA3O75145 1194 aa18.81■□□□□ 0.6
SNF8-205ENST00000507302 HOXB8P17481 243 aaPredicted RBP18.81■□□□□ 0.6
SNF8-205ENST00000507302 STAT5BP51692 787 aa18.81■□□□□ 0.6
SNF8-205ENST00000507302 FOXK2Q01167 660 aa18.81■□□□□ 0.6
SNF8-205ENST00000507302 UBE2SQ16763 222 aa18.81■□□□□ 0.6
SNF8-205ENST00000507302 TMEM266Q2M3C6 531 aa18.81■□□□□ 0.6
SNF8-205ENST00000507302 FAM102BQ5T8I3 360 aa18.81■□□□□ 0.6
SNF8-205ENST00000507302 KIAA0319LQ8IZA0 1049 aa18.81■□□□□ 0.6
SNF8-205ENST00000507302 MYL10Q9BUA6 226 aa18.81■□□□□ 0.6
SNF8-205ENST00000507302 CDHR5Q9HBB8 845 aa18.81■□□□□ 0.6
SNF8-205ENST00000507302 TYW1Q9NV66 732 aaKnown RBP18.81■□□□□ 0.6
SNF8-205ENST00000507302 FAM86C1Q9NVL1 165 aa18.81■□□□□ 0.6
SNF8-205ENST00000507302 PKD2L1Q9P0L9 805 aa18.81■□□□□ 0.6
SNF8-205ENST00000507302 TRPC6Q9Y210 931 aa18.81■□□□□ 0.6
SNF8-205ENST00000507302 COL1A2P08123 1366 aa18.81■□□□□ 0.6
SNF8-205ENST00000507302 SPDYE3A6NKU9 549 aa18.8■□□□□ 0.6
SNF8-205ENST00000507302 ZBTB42B2RXF5 422 aa18.8■□□□□ 0.6
SNF8-205ENST00000507302 GALR2O43603 387 aaPredicted RBP18.8■□□□□ 0.6
SNF8-205ENST00000507302 CHMLP26374 656 aa18.8■□□□□ 0.6
SNF8-205ENST00000507302 ITGB3BPQ13352 177 aaPredicted RBP18.8■□□□□ 0.6
SNF8-205ENST00000507302 DSC3Q14574 896 aa18.8■□□□□ 0.6
SNF8-205ENST00000507302 CYP2W1Q8TAV3 490 aa18.8■□□□□ 0.6
SNF8-205ENST00000507302 MICAL1Q8TDZ2 1067 aa18.8■□□□□ 0.6
SNF8-205ENST00000507302 MRPS27Q92552 414 aaKnown RBP18.8■□□□□ 0.6
SNF8-205ENST00000507302 MAP4K1Q92918 833 aa18.8■□□□□ 0.6
SNF8-205ENST00000507302 ADAM2Q99965 735 aa18.8■□□□□ 0.6
SNF8-205ENST00000507302 TMEM161AQ9NX61 479 aa18.8■□□□□ 0.6
SNF8-205ENST00000507302 TMEM260Q9NX78 707 aa18.8■□□□□ 0.6
SNF8-205ENST00000507302 HCSTQ9UBK5 93 aa18.8■□□□□ 0.6
SNF8-205ENST00000507302 FAM186AA6NE01 2351 aa18.79■□□□□ 0.6
SNF8-205ENST00000507302 PTPRZ1P23471 2315 aaPredicted RBP18.79■□□□□ 0.6
SNF8-205ENST00000507302 TBKBP1A7MCY6 615 aa18.79■□□□□ 0.6
SNF8-205ENST00000507302 RPS6KA5O75582 802 aa18.79■□□□□ 0.6
SNF8-205ENST00000507302 PDGFBP01127 241 aaPredicted RBP18.79■□□□□ 0.6
SNF8-205ENST00000507302 KLRC1P26715 233 aa18.79■□□□□ 0.6
SNF8-205ENST00000507302 ODR4Q5SWX8 454 aa18.79■□□□□ 0.6
SNF8-205ENST00000507302 TTC22Q5TAA0 569 aa18.79■□□□□ 0.6
SNF8-205ENST00000507302 TMTC2Q8N394 836 aa18.79■□□□□ 0.6
SNF8-205ENST00000507302 RUFY2Q8WXA3 655 aa18.79■□□□□ 0.6
SNF8-205ENST00000507302 ST3GAL5Q9UNP4 418 aa18.79■□□□□ 0.6
SNF8-205ENST00000507302 SGSM2O43147 1006 aa18.78■□□□□ 0.6
SNF8-205ENST00000507302 HBP1O60381 514 aa18.78■□□□□ 0.6
SNF8-205ENST00000507302 SRGAP2BP0DMP2 458 aa18.78■□□□□ 0.6
SNF8-205ENST00000507302 ARP10275 920 aa18.78■□□□□ 0.6
SNF8-205ENST00000507302 LAG3P18627 525 aa18.78■□□□□ 0.6
SNF8-205ENST00000507302 NBL1P41271 181 aa18.78■□□□□ 0.6
SNF8-205ENST00000507302 LIFRP42702 1097 aa18.78■□□□□ 0.6
SNF8-205ENST00000507302 NFX1Q12986 1120 aaKnown RBP18.78■□□□□ 0.6
SNF8-205ENST00000507302 ABHD15Q6UXT9 468 aa18.78■□□□□ 0.6
SNF8-205ENST00000507302 LRRC55Q6ZSA7 311 aa18.78■□□□□ 0.6
SNF8-205ENST00000507302 UBALD2Q8IYN6 164 aa18.78■□□□□ 0.6
SNF8-205ENST00000507302 ATOH1Q92858 354 aaPredicted RBP18.78■□□□□ 0.6
SNF8-205ENST00000507302 SDF4Q9BRK5 362 aa18.78■□□□□ 0.6
SNF8-205ENST00000507302 AGO4Q9HCK5 861 aaKnown RBP18.78■□□□□ 0.6
SNF8-205ENST00000507302 NGRNQ9NPE2 291 aaKnown RBP18.78■□□□□ 0.6
SNF8-205ENST00000507302 RNF19AQ9NV58 838 aa18.78■□□□□ 0.6
SNF8-205ENST00000507302 WDR81Q562E7 1941 aa18.78■□□□□ 0.6
SNF8-205ENST00000507302 HIDE1A8MVS5 230 aa18.77■□□□□ 0.6
SNF8-205ENST00000507302 MEIS1O00470 390 aa18.77■□□□□ 0.6
SNF8-205ENST00000507302 SH2B2O14492 632 aaPredicted RBP18.77■□□□□ 0.6
SNF8-205ENST00000507302 GPR182O15218 404 aa18.77■□□□□ 0.6
SNF8-205ENST00000507302 CCNE2O96020 404 aa18.77■□□□□ 0.6
SNF8-205ENST00000507302 PDE4AP27815 886 aa18.77■□□□□ 0.6
SNF8-205ENST00000507302 TECP42680 631 aa18.77■□□□□ 0.6
SNF8-205ENST00000507302 CEP55Q53EZ4 464 aa18.77■□□□□ 0.6
SNF8-205ENST00000507302 FAM228AQ86W67 206 aa18.77■□□□□ 0.6
SNF8-205ENST00000507302 THNSL1Q8IYQ7 743 aa18.77■□□□□ 0.6
SNF8-205ENST00000507302 CMTR1Q8N1G2 835 aaKnown RBP18.77■□□□□ 0.6
SNF8-205ENST00000507302 CASD1Q96PB1 797 aa18.77■□□□□ 0.6
SNF8-205ENST00000507302 CACNA1AO00555 2505 aa18.77■□□□□ 0.6
SNF8-205ENST00000507302 MYH9P35579 1960 aaKnown RBP18.77■□□□□ 0.59
SNF8-205ENST00000507302 ZNF292O60281 2723 aa18.76■□□□□ 0.59
SNF8-205ENST00000507302 DENND4AQ7Z401 1863 aa18.76■□□□□ 0.59
SNF8-205ENST00000507302 DENND3A2RUS2 1198 aa18.76■□□□□ 0.59
SNF8-205ENST00000507302 H0Y858 1186 aa18.76■□□□□ 0.59
SNF8-205ENST00000507302 GPR32O75388 356 aa18.76■□□□□ 0.59
SNF8-205ENST00000507302 CALM1P0DP23 149 aa18.76■□□□□ 0.59
SNF8-205ENST00000507302 CALM2P0DP24 149 aa18.76■□□□□ 0.59
SNF8-205ENST00000507302 CALM3P0DP25 149 aa18.76■□□□□ 0.59
SNF8-205ENST00000507302 CRYBB1P53674 252 aaPredicted RBP18.76■□□□□ 0.59
SNF8-205ENST00000507302 COL9A3Q14050 684 aaPredicted RBP18.76■□□□□ 0.59
SNF8-205ENST00000507302 SPOUT1Q5T280 376 aaKnown RBP18.76■□□□□ 0.59
SNF8-205ENST00000507302 TMTC3Q6ZXV5 915 aa18.76■□□□□ 0.59
SNF8-205ENST00000507302 NIPA1Q7RTP0 329 aa18.76■□□□□ 0.59
SNF8-205ENST00000507302 TMEM87BQ96K49 555 aa18.76■□□□□ 0.59
SNF8-205ENST00000507302 TCF25Q9BQ70 676 aa18.76■□□□□ 0.59
SNF8-205ENST00000507302 TMEM117Q9H0C3 514 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms