RNA–Protein interactions for RNA: ENST00000507116.5

PDE4D-216, Transcript of phosphodiesterase 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE4D, Length 3,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-216ENST00000507116 NCK2O43639 380 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 ATP2C2O75185 946 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 CHGBP05060 677 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 COL6A2P12110 1019 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 PRKAR1BP31321 381 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 CSTF2P33240 577 aaKnown RBP eCLIP6.66□□□□□ -1.34
PDE4D-216ENST00000507116 EPHA7Q15375 998 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 TAF1CQ15572 869 aaPredicted RBP6.66□□□□□ -1.34
PDE4D-216ENST00000507116 EZH2Q15910 746 aaKnown RBP6.66□□□□□ -1.34
PDE4D-216ENST00000507116 MOGQ16653 247 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 TBC1D1Q86TI0 1168 aaPredicted RBP6.66□□□□□ -1.34
PDE4D-216ENST00000507116 SPATA24Q86W54 205 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 ANKMY2Q8IV38 441 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 FBXO41Q8TF61 875 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 DNAJC9Q8WXX5 260 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 INTS12Q96CB8 462 aaKnown RBP6.66□□□□□ -1.34
PDE4D-216ENST00000507116 IQCDQ96DY2 449 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 SEC16BQ96JE7 1060 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 NLRP3Q96P20 1036 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 PPP1R10Q96QC0 940 aaKnown RBP6.66□□□□□ -1.34
PDE4D-216ENST00000507116 TSG101Q99816 390 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 ESF1Q9H501 851 aaKnown RBP6.66□□□□□ -1.34
PDE4D-216ENST00000507116 PIH1D1Q9NWS0 290 aaKnown RBP6.66□□□□□ -1.34
PDE4D-216ENST00000507116 SIRT5Q9NXA8 310 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.66□□□□□ -1.34
PDE4D-216ENST00000507116 ZMYND8Q9ULU4 1186 aaPredicted RBP6.66□□□□□ -1.34
PDE4D-216ENST00000507116 TOP2BQ02880 1626 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 POLR3AO14802 1390 aaPredicted RBP6.66□□□□□ -1.34
PDE4D-216ENST00000507116 TRAV6A0A075B6T7 132 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 OR5K4A6NMS3 321 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 NQO1P15559 274 aaKnown RBP6.66□□□□□ -1.34
PDE4D-216ENST00000507116 M6PRP20645 277 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 KRT20P35900 424 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 MDH1P40925 334 aaKnown RBP6.66□□□□□ -1.34
PDE4D-216ENST00000507116 LIFRP42702 1097 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 PCYT1AP49585 367 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 PRKCEQ02156 737 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 KIF23Q02241 960 aaPredicted RBP6.66□□□□□ -1.34
PDE4D-216ENST00000507116 CAMK4Q16566 473 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 STX1AQ16623 288 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 PLEKHG6Q3KR16 790 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 ODF2Q5BJF6 829 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 Q6ZNX1 250 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 NATD1Q8N6N6 113 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 MLKLQ8NB16 471 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 CDC26Q8NHZ8 85 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 CALML6Q8TD86 181 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 FAM136AQ96C01 138 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.66□□□□□ -1.34
PDE4D-216ENST00000507116 CRNKL1Q9BZJ0 848 aaKnown RBP6.66□□□□□ -1.34
PDE4D-216ENST00000507116 NEK6Q9HC98 313 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 ANO2Q9NQ90 1003 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 FAF1Q9UNN5 650 aaPredicted RBP6.66□□□□□ -1.34
PDE4D-216ENST00000507116 KDM5DQ9BY66 1539 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 GMNCA6NCL1 334 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 C5orf60A6NFR6 353 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 HDAC3O15379 428 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 ABCB1P08183 1280 aaPredicted RBP6.66□□□□□ -1.34
PDE4D-216ENST00000507116 SPATA31D3P0C874 917 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 CALM1P0DP23 149 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 CALM2P0DP24 149 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 CALM3P0DP25 149 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 HOXB1P14653 301 aaPredicted RBP6.66□□□□□ -1.34
PDE4D-216ENST00000507116 RXRAP19793 462 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 ZC3H6P61129 1189 aaKnown RBP6.66□□□□□ -1.34
PDE4D-216ENST00000507116 OLR1P78380 273 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 RASGRF1Q13972 1273 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 R3HDM1Q15032 1099 aaKnown RBP6.66□□□□□ -1.34
PDE4D-216ENST00000507116 STK38Q15208 465 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 STILQ15468 1287 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 ANKRD39Q53RE8 183 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 TTC39AQ5SRH9 613 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 KIAA1614Q5VZ46 1190 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 SPATA31D4Q6ZUB0 917 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 METTL3Q86U44 580 aaKnown RBP6.66□□□□□ -1.34
PDE4D-216ENST00000507116 DDX42Q86XP3 938 aaKnown RBP eCLIP6.66□□□□□ -1.34
PDE4D-216ENST00000507116 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.66□□□□□ -1.34
PDE4D-216ENST00000507116 ALDH16A1Q8IZ83 802 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 SLC38A6Q8IZM9 456 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 ARFGAP2Q8N6H7 521 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.66□□□□□ -1.34
PDE4D-216ENST00000507116 CERKQ8TCT0 537 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 DHX38Q92620 1227 aaKnown RBP6.66□□□□□ -1.34
PDE4D-216ENST00000507116 GPATCH1Q9BRR8 931 aaKnown RBP6.66□□□□□ -1.34
PDE4D-216ENST00000507116 SELENOOQ9BVL4 669 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 CALN1Q9BXU9 219 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 PTTG2Q9NZH5 202 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 ADAMTS8Q9UP79 889 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 LEMD3Q9Y2U8 911 aa6.66□□□□□ -1.34
PDE4D-216ENST00000507116 TDRKHQ9Y2W6 561 aaKnown RBP6.66□□□□□ -1.34
PDE4D-216ENST00000507116 MAGEB3O15480 346 aa6.65□□□□□ -1.34
PDE4D-216ENST00000507116 IFIT2P09913 472 aaKnown RBP6.65□□□□□ -1.34
PDE4D-216ENST00000507116 ADD2P35612 726 aa6.65□□□□□ -1.34
PDE4D-216ENST00000507116 HSPA9P38646 679 aaKnown RBP6.65□□□□□ -1.34
PDE4D-216ENST00000507116 APBA1Q02410 837 aa6.65□□□□□ -1.34
PDE4D-216ENST00000507116 GALNT1Q10472 559 aaPredicted RBP6.65□□□□□ -1.34
PDE4D-216ENST00000507116 SEMA3AQ14563 771 aa6.65□□□□□ -1.34
PDE4D-216ENST00000507116 KPNB1Q14974 876 aaKnown RBP6.65□□□□□ -1.34
PDE4D-216ENST00000507116 KLHL38Q2WGJ6 581 aa6.65□□□□□ -1.34
PDE4D-216ENST00000507116 LIN52Q52LA3 116 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms