RNA–Protein interactions for RNA: ENST00000507063.1

NEDD4-206, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4, Length 457 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-206ENST00000507063 GOLGA6L1Q8N7Z2 621 aa7.55□□□□□ -1.2
NEDD4-206ENST00000507063 NSUN6Q8TEA1 469 aaKnown RBP7.55□□□□□ -1.2
NEDD4-206ENST00000507063 RNF41Q9H4P4 317 aaPredicted RBP7.55□□□□□ -1.2
NEDD4-206ENST00000507063 EPHX3Q9H6B9 360 aa7.55□□□□□ -1.2
NEDD4-206ENST00000507063 PXMP2Q9NR77 195 aa7.55□□□□□ -1.2
NEDD4-206ENST00000507063 HRH3Q9Y5N1 445 aa7.55□□□□□ -1.2
NEDD4-206ENST00000507063 CYTH3O43739 400 aa7.54□□□□□ -1.2
NEDD4-206ENST00000507063 KPNA6O60684 536 aa7.54□□□□□ -1.2
NEDD4-206ENST00000507063 PFKMP08237 780 aa7.54□□□□□ -1.2
NEDD4-206ENST00000507063 ACTN1P12814 892 aa7.54□□□□□ -1.2
NEDD4-206ENST00000507063 GSPT1P15170 499 aaKnown RBP7.54□□□□□ -1.2
NEDD4-206ENST00000507063 SELPP16109 830 aa7.54□□□□□ -1.2
NEDD4-206ENST00000507063 POU3F3P20264 500 aaPredicted RBP7.54□□□□□ -1.2
NEDD4-206ENST00000507063 CASTP20810 708 aaKnown RBP7.54□□□□□ -1.2
NEDD4-206ENST00000507063 RFC2P35250 354 aa7.54□□□□□ -1.2
NEDD4-206ENST00000507063 SOX11P35716 441 aa7.54□□□□□ -1.2
NEDD4-206ENST00000507063 HSD17B4P51659 736 aa7.54□□□□□ -1.2
NEDD4-206ENST00000507063 PTH1RQ03431 593 aa7.54□□□□□ -1.2
NEDD4-206ENST00000507063 PTPN11Q06124 597 aaPredicted RBP7.54□□□□□ -1.2
NEDD4-206ENST00000507063 SEC23AQ15436 765 aa7.54□□□□□ -1.2
NEDD4-206ENST00000507063 DGKDQ16760 1214 aa7.54□□□□□ -1.2
NEDD4-206ENST00000507063 KIAA0753Q2KHM9 967 aa7.54□□□□□ -1.2
NEDD4-206ENST00000507063 TRIM71Q2Q1W2 868 aaKnown RBP7.54□□□□□ -1.2
NEDD4-206ENST00000507063 BRDTQ58F21 947 aaPredicted RBP7.54□□□□□ -1.2
NEDD4-206ENST00000507063 LRRC8DQ7L1W4 858 aa7.54□□□□□ -1.2
NEDD4-206ENST00000507063 HOMER1Q86YM7 354 aa7.54□□□□□ -1.2
NEDD4-206ENST00000507063 PGBD3Q8N328 593 aa7.54□□□□□ -1.2
NEDD4-206ENST00000507063 PLPP7Q8NBV4 271 aa7.54□□□□□ -1.2
NEDD4-206ENST00000507063 PHOSPHO2Q8TCD6 241 aa7.54□□□□□ -1.2
NEDD4-206ENST00000507063 GDPD5Q8WTR4 605 aa7.54□□□□□ -1.2
NEDD4-206ENST00000507063 PIBF1Q8WXW3 757 aa7.54□□□□□ -1.2
NEDD4-206ENST00000507063 UCN2Q96RP3 112 aa7.54□□□□□ -1.2
NEDD4-206ENST00000507063 PIGSQ96S52 555 aa7.54□□□□□ -1.2
NEDD4-206ENST00000507063 SLC9A7Q96T83 725 aa7.54□□□□□ -1.2
NEDD4-206ENST00000507063 RWDD1Q9H446 243 aaPredicted RBP7.54□□□□□ -1.2
NEDD4-206ENST00000507063 CD320Q9NPF0 282 aa7.54□□□□□ -1.2
NEDD4-206ENST00000507063 DIAPH3Q9NSV4 1193 aa7.54□□□□□ -1.2
NEDD4-206ENST00000507063 GTF2IRD1Q9UHL9 959 aa7.54□□□□□ -1.2
NEDD4-206ENST00000507063 MRPL11Q9Y3B7 192 aaKnown RBP7.54□□□□□ -1.2
NEDD4-206ENST00000507063 SUPT16HQ9Y5B9 1047 aaKnown RBP7.54□□□□□ -1.2
NEDD4-206ENST00000507063 MRVI1Q9Y6F6 885 aa7.54□□□□□ -1.2
NEDD4-206ENST00000507063 RAD50Q92878 1312 aa7.53□□□□□ -1.2
NEDD4-206ENST00000507063 TANC1Q9C0D5 1861 aa7.53□□□□□ -1.2
NEDD4-206ENST00000507063 TRIP12Q14669 1992 aaPredicted RBP7.53□□□□□ -1.2
NEDD4-206ENST00000507063 A0A1B0GTH6 734 aa7.53□□□□□ -1.2
NEDD4-206ENST00000507063 PALM3A6NDB9 673 aaPredicted RBP7.53□□□□□ -1.2
NEDD4-206ENST00000507063 KLRF2D3W0D1 207 aa7.53□□□□□ -1.2
NEDD4-206ENST00000507063 HAS3O00219 553 aa7.53□□□□□ -1.2
NEDD4-206ENST00000507063 EIF3JO75822 258 aaKnown RBP7.53□□□□□ -1.2
NEDD4-206ENST00000507063 GGPS1O95749 300 aa7.53□□□□□ -1.2
NEDD4-206ENST00000507063 F2P00734 622 aa7.53□□□□□ -1.2
NEDD4-206ENST00000507063 CXCL10P02778 98 aa7.53□□□□□ -1.2
NEDD4-206ENST00000507063 PCP11498 1178 aaKnown RBP7.53□□□□□ -1.2
NEDD4-206ENST00000507063 AMPD1P23109 780 aa7.53□□□□□ -1.2
NEDD4-206ENST00000507063 MFAP1P55081 439 aaKnown RBP7.53□□□□□ -1.2
NEDD4-206ENST00000507063 BFSP2Q13515 415 aa7.53□□□□□ -1.2
NEDD4-206ENST00000507063 PGM5Q15124 567 aa7.53□□□□□ -1.2
NEDD4-206ENST00000507063 IMMTQ16891 758 aaKnown RBP7.53□□□□□ -1.2
NEDD4-206ENST00000507063 ASPRV1Q53RT3 343 aa7.53□□□□□ -1.2
NEDD4-206ENST00000507063 CELF3Q5SZQ8 465 aaKnown RBP7.53□□□□□ -1.2
NEDD4-206ENST00000507063 IFIT1BQ5T764 474 aaKnown RBP7.53□□□□□ -1.2
NEDD4-206ENST00000507063 STOX1Q6ZVD7 989 aa7.53□□□□□ -1.2
NEDD4-206ENST00000507063 VSIG10LQ86VR7 867 aa7.53□□□□□ -1.2
NEDD4-206ENST00000507063 SESTD1Q86VW0 696 aa7.53□□□□□ -1.2
NEDD4-206ENST00000507063 FCHSD1Q86WN1 690 aa7.53□□□□□ -1.2
NEDD4-206ENST00000507063 MCF2L2Q86YR7 1114 aa7.53□□□□□ -1.2
NEDD4-206ENST00000507063 DHX37Q8IY37 1157 aaKnown RBP7.53□□□□□ -1.2
NEDD4-206ENST00000507063 C7orf31Q8N865 590 aa7.53□□□□□ -1.2
NEDD4-206ENST00000507063 AFAP1L1Q8TED9 768 aa7.53□□□□□ -1.2
NEDD4-206ENST00000507063 MTMR8Q96EF0 704 aa7.53□□□□□ -1.2
NEDD4-206ENST00000507063 IWS1Q96ST2 819 aa7.53□□□□□ -1.2
NEDD4-206ENST00000507063 MPHOSPH6Q99547 160 aaKnown RBP7.53□□□□□ -1.2
NEDD4-206ENST00000507063 PDCD2LQ9BRP1 358 aa7.53□□□□□ -1.2
NEDD4-206ENST00000507063 C17orf80Q9BSJ5 609 aa7.53□□□□□ -1.2
NEDD4-206ENST00000507063 C16orf70Q9BSU1 422 aa7.53□□□□□ -1.2
NEDD4-206ENST00000507063 DSCC1Q9BVC3 393 aa7.53□□□□□ -1.2
NEDD4-206ENST00000507063 SUGCTQ9HAC7 445 aa7.53□□□□□ -1.2
NEDD4-206ENST00000507063 RTEL1Q9NZ71 1219 aa7.53□□□□□ -1.2
NEDD4-206ENST00000507063 PCDHA1Q9Y5I3 950 aa7.53□□□□□ -1.2
NEDD4-206ENST00000507063 TRIOO75962 3097 aa7.53□□□□□ -1.2
NEDD4-206ENST00000507063 PRRC2BQ5JSZ5 2229 aaKnown RBP7.53□□□□□ -1.2
NEDD4-206ENST00000507063 COL4A4P53420 1690 aaPredicted RBP7.53□□□□□ -1.2
NEDD4-206ENST00000507063 MYO9BQ13459 2157 aa7.53□□□□□ -1.2
NEDD4-206ENST00000507063 LAMA4Q16363 1823 aa7.52□□□□□ -1.2
NEDD4-206ENST00000507063 KIAA1217Q5T5P2 1943 aa7.52□□□□□ -1.2
NEDD4-206ENST00000507063 LINC01553A4QN01 128 aa7.52□□□□□ -1.21
NEDD4-206ENST00000507063 B4DLN1 442 aa7.52□□□□□ -1.21
NEDD4-206ENST00000507063 ZBTB5O15062 677 aa7.52□□□□□ -1.21
NEDD4-206ENST00000507063 TREHO43280 583 aa7.52□□□□□ -1.21
NEDD4-206ENST00000507063 LGR5O75473 907 aa7.52□□□□□ -1.21
NEDD4-206ENST00000507063 BAIAP3O94812 1187 aa7.52□□□□□ -1.21
NEDD4-206ENST00000507063 GJB5O95377 273 aa7.52□□□□□ -1.21
NEDD4-206ENST00000507063 CYP21A2P08686 494 aa7.52□□□□□ -1.21
NEDD4-206ENST00000507063 UBA1P22314 1058 aaKnown RBP7.52□□□□□ -1.21
NEDD4-206ENST00000507063 THPOP40225 353 aa7.52□□□□□ -1.21
NEDD4-206ENST00000507063 KCNJ6P48051 423 aa7.52□□□□□ -1.21
NEDD4-206ENST00000507063 MRPL12P52815 198 aaKnown RBP7.52□□□□□ -1.21
NEDD4-206ENST00000507063 SNRPNP63162 240 aaKnown RBP7.52□□□□□ -1.21
NEDD4-206ENST00000507063 IRX6P78412 446 aaPredicted RBP7.52□□□□□ -1.21
NEDD4-206ENST00000507063 MRPS9P82933 396 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms